CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32767924|32768109
Strand +
CircType exon
Host Gene ENSG00000162522.9;
Algorism CIRI2;
Sequence TCTGGGTGTCTCCATGGTCCCAGCCACCCTTGTTCAGTTTCTGTTTCTCTGGAAGACACCAGAAGGGTCTGTTGGGTTAGGCCCCTGACCTTGACAGCTGACAGTGCAGCACTGGAGGGAGGAGAGGGGAGGGGAGTGGAGAGGAAGCTTACCTTGGTGTTGTAGGGAGCGGAGCCCCTCCTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32767924|32768109 hsa-miR-572 0 0 1
chr1:32767924|32768109 hsa-miR-591 0 0 1
chr1:32767924|32768109 hsa-miR-665 0 0 1
chr1:32767924|32768109 hsa-miR-1237-5p 0 0 1
chr1:32767924|32768109 hsa-miR-1237-3p 0 0 1
chr1:32767924|32768109 hsa-miR-1825 0 0 1
chr1:32767924|32768109 hsa-miR-512-3p 0 0 1
chr1:32767924|32768109 hsa-miR-199a-5p 0 0 1
chr1:32767924|32768109 hsa-miR-423-5p 0 0 1
chr1:32767924|32768109 hsa-miR-525-5p 0 0 1
chr1:32767924|32768109 hsa-miR-1207-3p 0 0 1
chr1:32767924|32768109 hsa-miR-199b-5p 0 0 1
chr1:32767924|32768109 hsa-miR-520a-5p 0 0 1
chr1:32767924|32768109 hsa-miR-516a-3p 0 0 1
chr1:32767924|32768109 hsa-miR-762 1 0 0
chr1:32767924|32768109 hsa-miR-1976 1 0 0
chr1:32767924|32768109 hsa-miR-4279 0 1 0
chr1:32767924|32768109 hsa-miR-3615 1 0 0
chr1:32767924|32768109 hsa-miR-4462 1 0 0
chr1:32767924|32768109 hsa-miR-4469 0 1 0
chr1:32767924|32768109 hsa-miR-4539 1 0 0
chr1:32767924|32768109 hsa-miR-4654 1 0 0
chr1:32767924|32768109 hsa-miR-5093 1 0 0
chr1:32767924|32768109 hsa-miR-5190 1 0 0
chr1:32767924|32768109 hsa-miR-5193 1 0 0
chr1:32767924|32768109 hsa-miR-5787 1 1 0
chr1:32767924|32768109 hsa-miR-12116 1 1 0
chr1:32767924|32768109 hsa-miR-103a-2-5p 1 0 0
chr1:32767924|32768109 hsa-miR-6749-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6892-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6881-3p 1 1 0
chr1:32767924|32768109 hsa-miR-7110-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6845-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6796-3p 1 0 0
chr1:32767924|32768109 hsa-miR-877-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6868-3p 0 1 0
chr1:32767924|32768109 hsa-miR-4793-3p 0 1 0
chr1:32767924|32768109 hsa-miR-6728-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6882-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6788-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6740-3p 1 0 0
chr1:32767924|32768109 hsa-miR-4738-3p 1 0 0
chr1:32767924|32768109 hsa-miR-1247-5p 1 0 0
chr1:32767924|32768109 hsa-miR-6803-3p 1 0 0
chr1:32767924|32768109 hsa-miR-7113-3p 1 0 0
chr1:32767924|32768109 hsa-miR-3667-3p 1 0 0
chr1:32767924|32768109 hsa-miR-7111-3p 1 1 0
chr1:32767924|32768109 hsa-miR-339-5p 1 0 0
chr1:32767924|32768109 hsa-miR-5584-5p 0 1 0
chr1:32767924|32768109 hsa-miR-6870-3p 1 0 0
chr1:32767924|32768109 hsa-miR-4724-5p 0 1 0
chr1:32767924|32768109 hsa-miR-1236-3p 1 0 0
chr1:32767924|32768109 hsa-miR-7106-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6887-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6741-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6752-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6826-3p 1 1 0
chr1:32767924|32768109 hsa-miR-4749-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6795-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6777-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6760-3p 1 0 0
chr1:32767924|32768109 hsa-miR-3124-3p 0 1 0
chr1:32767924|32768109 hsa-miR-6883-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6748-3p 1 0 0
chr1:32767924|32768109 hsa-miR-1229-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6734-3p 1 1 0
chr1:32767924|32768109 hsa-miR-1249-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6729-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6800-3p 1 0 0
chr1:32767924|32768109 hsa-miR-3162-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6737-5p 1 0 0
chr1:32767924|32768109 hsa-miR-6819-5p 1 0 0
chr1:32767924|32768109 hsa-miR-4685-3p 1 0 0
chr1:32767924|32768109 hsa-miR-324-3p 1 0 0
chr1:32767924|32768109 hsa-miR-3184-5p 0 1 0
chr1:32767924|32768109 hsa-miR-10398-5p 1 0 0
chr1:32767924|32768109 hsa-miR-2682-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6762-5p 0 1 0
chr1:32767924|32768109 hsa-miR-6756-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6792-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6805-3p 1 0 0
chr1:32767924|32768109 hsa-miR-3059-5p 1 1 0
chr1:32767924|32768109 hsa-miR-4723-3p 1 1 0
chr1:32767924|32768109 hsa-miR-483-3p 1 1 0
chr1:32767924|32768109 hsa-miR-6511b-3p 1 0 0
chr1:32767924|32768109 hsa-miR-6769b-3p 1 1 0
chr1:32767924|32768109 hsa-miR-103a-1-5p 1 0 0
chr1:32767924|32768109 hsa-miR-6833-3p 1 0 0
chr1:32767924|32768109 hsa-miR-7162-5p 0 1 0
chr1:32767924|32768109 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:32767924|32768109
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MEDTRRVCWVRPLTLTADSAALEGGEGRGVERKLTLVL
Nucleotide Sequence CTGGAAGACACCAGAAGGGTCTGTTGGGTTAGGCCCCTGACCTTGACAGCTGACAGTGCAGCACTGGAGGGAGGAGAGGGGAGGGGAGTGGAGAGGAAGCTTACCTTGGTGTTGTAG
CircID chr1:32767924|32768109
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence LGVSMVPATLVQFLFLWKTPEGSVGLGP
Nucleotide Sequence CTGGGTGTCTCCATGGTCCCAGCCACCCTTGTTCAGTTTCTGTTTCTCTGGAAGACACCAGAAGGGTCTGTTGGGTTAGGCCCCTGA
CircID chr1:32767924|32768109
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MTVQHWREERGGEWRGSLPWCCRERSPSW
Nucleotide Sequence CTGACAGTGCAGCACTGGAGGGAGGAGAGGGGAGGGGAGTGGAGAGGAAGCTTACCTTGGTGTTGTAGGGAGCGGAGCCCCTCCTGG
CircID chr1:32767924|32768109
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MSAVKVRGLTQQTLLVSSRETETEQGWLGPWRHP
Nucleotide Sequence CTGTCAGCTGTCAAGGTCAGGGGCCTAACCCAACAGACCCTTCTGGTGTCTTCCAGAGAAACAGAAACTGAACAAGGGTGGCTGGGACCATGGAGACACCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab