CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32773859|32774182
Strand -
CircType exon
Host Gene ENSG00000162522.9;
Algorism CIRI2;
Sequence CTTTCTCTCTCCTCATTTCGGTGCATGTCCTTTCTGCAGCTGCCTTTCAGCACAGGTGGTTCCACTGGGGGCAGCTAACGCTGAGTGACAAGGATGGGAAGCCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGCCCCCCAGGGCCACCGCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32773859|32774182 hsa-miR-22-5p 0 0 1
chr1:32773859|32774182 hsa-miR-22-3p 0 0 1
chr1:32773859|32774182 hsa-miR-144-5p 0 0 1
chr1:32773859|32774182 hsa-miR-144-3p 0 0 1
chr1:32773859|32774182 hsa-miR-185-5p 0 0 1
chr1:32773859|32774182 hsa-miR-185-3p 0 0 1
chr1:32773859|32774182 hsa-miR-328-5p 0 0 1
chr1:32773859|32774182 hsa-miR-328-3p 0 0 1
chr1:32773859|32774182 hsa-miR-488-5p 0 0 1
chr1:32773859|32774182 hsa-miR-488-3p 0 0 1
chr1:32773859|32774182 hsa-miR-552-5p 0 0 1
chr1:32773859|32774182 hsa-miR-552-3p 0 0 1
chr1:32773859|32774182 hsa-miR-596 1 0 1
chr1:32773859|32774182 hsa-miR-637 0 0 1
chr1:32773859|32774182 hsa-miR-668-5p 0 0 1
chr1:32773859|32774182 hsa-miR-668-3p 0 0 1
chr1:32773859|32774182 hsa-miR-298 0 0 1
chr1:32773859|32774182 hsa-miR-543 0 0 1
chr1:32773859|32774182 hsa-miR-663b 0 0 1
chr1:32773859|32774182 hsa-miR-1291 0 0 1
chr1:32773859|32774182 hsa-miR-1253 0 0 1
chr1:32773859|32774182 hsa-miR-512-5p 0 0 1
chr1:32773859|32774182 hsa-miR-671-5p 0 0 1
chr1:32773859|32774182 hsa-miR-486-3p 0 0 1
chr1:32773859|32774182 hsa-miR-485-5p 0 0 1
chr1:32773859|32774182 hsa-miR-361-3p 0 0 1
chr1:32773859|32774182 hsa-miR-324-3p 0 0 1
chr1:32773859|32774182 hsa-miR-362-5p 0 0 1
chr1:32773859|32774182 hsa-miR-502-3p 0 0 1
chr1:32773859|32774182 hsa-miR-501-3p 0 0 1
chr1:32773859|32774182 hsa-miR-220b 0 0 1
chr1:32773859|32774182 hsa-miR-220c 0 0 1
chr1:32773859|32774182 hsa-miR-101 0 0 1
chr1:32773859|32774182 hsa-miR-2110 0 1 0
chr1:32773859|32774182 hsa-miR-3196 1 0 0
chr1:32773859|32774182 hsa-miR-3197 1 0 0
chr1:32773859|32774182 hsa-miR-4254 1 0 0
chr1:32773859|32774182 hsa-miR-4281 1 0 0
chr1:32773859|32774182 hsa-miR-3655 0 1 0
chr1:32773859|32774182 hsa-miR-3929 1 0 0
chr1:32773859|32774182 hsa-miR-3937 1 0 0
chr1:32773859|32774182 hsa-miR-4438 0 1 0
chr1:32773859|32774182 hsa-miR-4478 0 1 0
chr1:32773859|32774182 hsa-miR-4515 1 0 0
chr1:32773859|32774182 hsa-miR-4644 0 1 0
chr1:32773859|32774182 hsa-miR-4656 1 0 0
chr1:32773859|32774182 hsa-miR-4739 1 0 0
chr1:32773859|32774182 hsa-miR-5698 1 0 0
chr1:32773859|32774182 hsa-miR-5739 0 1 0
chr1:32773859|32774182 hsa-miR-6085 1 0 0
chr1:32773859|32774182 hsa-miR-8089 1 0 0
chr1:32773859|32774182 hsa-miR-12115 1 0 0
chr1:32773859|32774182 hsa-miR-134-3p 1 0 0
chr1:32773859|32774182 hsa-miR-150-3p 1 0 0
chr1:32773859|32774182 hsa-miR-18a-3p 0 1 0
chr1:32773859|32774182 hsa-miR-6730-5p 1 0 0
chr1:32773859|32774182 hsa-miR-4474-3p 0 1 0
chr1:32773859|32774182 hsa-miR-197-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6829-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6798-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6735-3p 1 0 0
chr1:32773859|32774182 hsa-miR-7109-5p 0 1 0
chr1:32773859|32774182 hsa-miR-4763-5p 0 1 0
chr1:32773859|32774182 hsa-miR-4786-3p 1 0 0
chr1:32773859|32774182 hsa-miR-4640-5p 1 0 0
chr1:32773859|32774182 hsa-miR-3158-5p 0 1 0
chr1:32773859|32774182 hsa-miR-199a-5p 1 0 0
chr1:32773859|32774182 hsa-miR-4661-3p 1 0 0
chr1:32773859|32774182 hsa-miR-6804-3p 0 1 0
chr1:32773859|32774182 hsa-miR-891a-3p 0 1 0
chr1:32773859|32774182 hsa-miR-4766-5p 0 1 0
chr1:32773859|32774182 hsa-miR-4787-3p 1 0 0
chr1:32773859|32774182 hsa-miR-500a-3p 0 1 0
chr1:32773859|32774182 hsa-miR-4524b-3p 0 1 0
chr1:32773859|32774182 hsa-miR-4763-3p 1 0 0
chr1:32773859|32774182 hsa-miR-6865-5p 0 1 0
chr1:32773859|32774182 hsa-miR-6893-5p 1 0 0
chr1:32773859|32774182 hsa-miR-1343-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6737-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6743-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6754-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6815-5p 0 1 0
chr1:32773859|32774182 hsa-miR-6722-3p 1 0 0
chr1:32773859|32774182 hsa-miR-6797-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6780b-5p 0 1 0
chr1:32773859|32774182 hsa-miR-6836-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6885-5p 1 0 0
chr1:32773859|32774182 hsa-miR-10398-3p 1 0 0
chr1:32773859|32774182 hsa-miR-6724-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6791-5p 0 1 0
chr1:32773859|32774182 hsa-miR-6762-5p 0 1 0
chr1:32773859|32774182 hsa-miR-4756-5p 1 0 0
chr1:32773859|32774182 hsa-miR-6884-5p 0 1 0
chr1:32773859|32774182 hsa-miR-4774-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:32773859|32774182
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence MGSHRCILLKSSLVNEGHPVLLGQAGWWSPRYQPLLLYSPGMLTFLFSACATCLGKLASPLAPVGPQQRGCPPGPPL
Nucleotide Sequence ATGGGAAGCCACAGGTGCATTTTACTCAAGTCTTCTCTAGTCAATGAGGGGCACCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTCCCCTAGGTATCAGCCTCTCTTACTGTACTCTCCGGGAATGTTAACCTTTCTATTTTCAGCCTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGCCCCCCAGGGCCACCGCTT
CircID chr1:32773859|32774182
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MCHLSRQAGFPIGPCGSTAAWLPPRATA
Nucleotide Sequence CTGTGCCACCTGTCTAGGCAAGCTGGCTTCCCCATTGGCCCCTGTGGGTCCACAGCAGCGTGGCTGCCCCCCAGGGCCACCGCT
CircID chr1:32773859|32774182
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MGGSHAAVDPQGPMGKPACLDRWHRLKIERLTFPESTVREADT
Nucleotide Sequence CTGGGGGGCAGCCACGCTGCTGTGGACCCACAGGGGCCAATGGGGAAGCCAGCTTGCCTAGACAGGTGGCACAGGCTGAAAATAGAAAGGTTAACATTCCCGGAGAGTACAGTAAGAGAGGCTGATACCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab