CircNet

General Information

circRNA Basic Information

CircID	chr1:33341840\|33342010
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCTTCCCACCTGGGGTCCTCTGAATACCAGAAGGCAGGGGGAACATCCAATGTCTGCAGCCTTTTCAAATCTGCTAAGGGCAGAGCTGTCAAAGGGACAAGGACTCCTTGCCTTGACACAGCAGGCTGTGGCTCCCTGAGGAACCTCTCTGAAGCACCTCCTCTGAAGGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:33341840\|33342010	hsa-miR-204-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-204-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-205-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-205-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-211-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-211-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-370-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-370-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-592	0	0	1
chr1:33341840\|33342010	hsa-miR-596	0	0	1
chr1:33341840\|33342010	hsa-miR-597-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-597-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-938	0	0	1
chr1:33341840\|33342010	hsa-miR-1237-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-1237-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-1266-5p	0	0	1
chr1:33341840\|33342010	hsa-miR-1266-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-1289	0	0	1
chr1:33341840\|33342010	hsa-miR-324-3p	0	0	1
chr1:33341840\|33342010	hsa-miR-514	0	0	1
chr1:33341840\|33342010	hsa-miR-4270	0	1	0
chr1:33341840\|33342010	hsa-miR-4518	0	1	0
chr1:33341840\|33342010	hsa-miR-4751	0	1	0
chr1:33341840\|33342010	hsa-miR-6074	1	0	0
chr1:33341840\|33342010	hsa-miR-12127	0	1	0
chr1:33341840\|33342010	hsa-miR-22-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-6747-3p	0	1	0
chr1:33341840\|33342010	hsa-miR-6825-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-125a-3p	1	0	0
chr1:33341840\|33342010	hsa-miR-6741-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-6827-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-6847-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-4774-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-449b-3p	0	1	0
chr1:33341840\|33342010	hsa-miR-6726-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-6752-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-6754-5p	0	1	0
chr1:33341840\|33342010	hsa-miR-6803-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-6851-5p	1	1	0
chr1:33341840\|33342010	hsa-miR-6858-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-939-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-6856-5p	1	0	0
chr1:33341840\|33342010	hsa-miR-6810-3p	0	1	0
chr1:33341840\|33342010	hsa-miR-892c-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:33341840\|33342010
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MGSSEYQKAGGTSNVCSLFKSAKGRAVKGTRTPCLDTAGCGSLRNLSEAPPLKD
Nucleotide Sequence	CTGGGGTCCTCTGAATACCAGAAGGCAGGGGGAACATCCAATGTCTGCAGCCTTTTCAAATCTGCTAAGGGCAGAGCTGTCAAAGGGACAAGGACTCCTTGCCTTGACACAGCAGGCTGTGGCTCCCTGAGGAACCTCTCTGAAGCACCTCCTCTGAAGGAC

CircID	chr1:33341840\|33342010
ORF Type	ORF2
Protein Length	39
Nucleotide Length	120
Protein Sequence	MNTRRQGEHPMSAAFSNLLRAELSKGQGLLALTQQAVAP
Nucleotide Sequence	CTGAATACCAGAAGGCAGGGGGAACATCCAATGTCTGCAGCCTTTTCAAATCTGCTAAGGGCAGAGCTGTCAAAGGGACAAGGACTCCTTGCCTTGACACAGCAGGCTGTGGCTCCCTGA

CircID	chr1:33341840\|33342010
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MTALPLADLKRLQTLDVPPAFWYSEDPRWE
Nucleotide Sequence	TTGACAGCTCTGCCCTTAGCAGATTTGAAAAGGCTGCAGACATTGGATGTTCCCCCTGCCTTCTGGTATTCAGAGGACCCCAGGTGGGAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information