CircNet

General Information

circRNA Basic Information

CircID	chr1:35388910\|35390098
Strand	+
CircType	exon
Host Gene	ENSG00000146463.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTGCAAATTGCTTTATAAACATGACTTGGCAAAACGCTGGGGAAATCACTGTAAAATGTGCAGTTATTGTTTACAGACATCTCCCAAATTGGTACAGAATAATTTAGGAGGGAAAGTGGAAGAGTTCTGTTGTGAAGAATGCATGTCCAAATATACAGTTTTGTTCTATCAGATGGCCAAATGTGATGCTTGTAAGCGACAGGGTAAACTCAGTGAGTCCTTGAAATGGCGAGGGGAAATGAAACATTTCTGTAACCTGCTTTGTATCTTGATGTTCTGTAATCAGCAAAGTGTATGTGACCCGCCTTCACAAAATAATGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:35388910\|35390098
ORF Type	ORF1
Protein Length	89
Nucleotide Length	267
Protein Sequence	MCSYCLQTSPKLVQNNLGGKVEEFCCEECMSKYTVLFYQMAKCDACKRQGKLSESLKWRGEMKHFCNLLCILMFCNQQSVCDPPSQNNA
Nucleotide Sequence	ATGTGCAGTTATTGTTTACAGACATCTCCCAAATTGGTACAGAATAATTTAGGAGGGAAAGTGGAAGAGTTCTGTTGTGAAGAATGCATGTCCAAATATACAGTTTTGTTCTATCAGATGGCCAAATGTGATGCTTGTAAGCGACAGGGTAAACTCAGTGAGTCCTTGAAATGGCGAGGGGAAATGAAACATTTCTGTAACCTGCTTTGTATCTTGATGTTCTGTAATCAGCAAAGTGTATGTGACCCGCCTTCACAAAATAATGCA

CircID	chr1:35388910\|35390098
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MFHFPSPFQGLTEFTLSLTSITFGHLIEQNCIFGHAFFTTELFHFPS*
Nucleotide Sequence	ATGTTTCATTTCCCCTCGCCATTTCAAGGACTCACTGAGTTTACCCTGTCGCTTACAAGCATCACATTTGGCCATCTGATAGAACAAAACTGTATATTTGGACATGCATTCTTCACAACAGAACTCTTCCACTTTCCCTCCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:35388910\|35390098	NOP56	1	1	1
chr1:35388910\|35390098	MOV10	5	3	1
chr1:35388910\|35390098	ELAVL1	9	10	4
chr1:35388910\|35390098	ZRANB2	1	0	0
chr1:35388910\|35390098	CELF2	0	1	1
chr1:35388910\|35390098	YTHDF1	1	0	0
chr1:35388910\|35390098	TAF15	0	1	0
chr1:35388910\|35390098	FMR1	6	4	0
chr1:35388910\|35390098	NUDT21	3	2	0
chr1:35388910\|35390098	RBM15B	3	4	0
chr1:35388910\|35390098	FUS	3	2	0
chr1:35388910\|35390098	DGCR8	0	0	1
chr1:35388910\|35390098	SRSF1	1	2	0
chr1:35388910\|35390098	NOP58	2	1	0
chr1:35388910\|35390098	U2AF1	1	0	0
chr1:35388910\|35390098	U2AF2	27	10	3
chr1:35388910\|35390098	DDX54	1	0	4
chr1:35388910\|35390098	RBM10	2	0	0
chr1:35388910\|35390098	RBM15	0	1	0
chr1:35388910\|35390098	FIP1L1	0	1	0
chr1:35388910\|35390098	PTBP1	0	0	1
chr1:35388910\|35390098	HNRNPC	31	1	0
chr1:35388910\|35390098	DDX3X	12	20	0
chr1:35388910\|35390098	ZC3H7B	1	0	0
chr1:35388910\|35390098	HNRNPA1	2	0	0
chr1:35388910\|35390098	LIN28B	2	2	1
chr1:35388910\|35390098	LIN28A	0	0	2
chr1:35388910\|35390098	IGF2BP1	1	0	0
chr1:35388910\|35390098	IGF2BP3	1	0	2
chr1:35388910\|35390098	IGF2BP2	4	0	3
chr1:35388910\|35390098	ELAVL3	1	0	0
chr1:35388910\|35390098	FTO	1	0	0
chr1:35388910\|35390098	TARDBP	9	8	2
chr1:35388910\|35390098	YTHDC1	3	1	0
chr1:35388910\|35390098	RBM47	0	1	1
chr1:35388910\|35390098	TIA1	2	0	0
chr1:35388910\|35390098	RBM22	0	2	0
chr1:35388910\|35390098	TIAL1	2	0	0
chr1:35388910\|35390098	AGO2	0	0	2
chr1:35388910\|35390098	ATXN2	9	8	0
chr1:35388910\|35390098	EWSR1	2	0	0
chr1:35388910\|35390098	EIF4A3	2	1	5
chr1:35388910\|35390098	FBL	1	0	1

CircRNA Information