CircRNA Information

General Information
circRNA Basic Information
CircID chr1:36139775|36140166
Strand -
CircType exon
Host Gene ENSG00000054116.10;
Algorism CIRI2;
Sequence CGAGCCAAGAAATCTTCAATCAGCCGGACTCCAATGTTAAAGCCCCTGGGAAGGAAGTTAGAGAAGAGACTATGATGGAGTCTAAATGTCTTATGTTTGAACATAAGGTTGTTGGTGGTAAAGGGAAAATGGGGATAATCTCAAAAACATCCCAGTAAATGAGTTTAGTGAGAAATGTACCCAAAATGTTGGCTAAGAAAGAGAGAGAACCCTGTTTTAAGCTCTAAAGGACAATGTAGACTCAGTGTGCTGGGAGGCCCCATTTCTGTCTCTCCTATGAAGGAGCTCACTCACATTTTGTCCAGCTGTTTATTCACATCTTCATCATTTTCATAGTCCTTACATAGCTGGGTGACCAGGGCACCATAGGTCAGGGTGAAGAGCTCAGAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:36139775|36140166 hsa-miR-192-5p 0 0 1
chr1:36139775|36140166 hsa-miR-192-3p 0 0 1
chr1:36139775|36140166 hsa-miR-204-5p 0 0 1
chr1:36139775|36140166 hsa-miR-204-3p 0 0 1
chr1:36139775|36140166 hsa-miR-205-5p 0 0 1
chr1:36139775|36140166 hsa-miR-205-3p 0 0 1
chr1:36139775|36140166 hsa-miR-211-5p 0 0 1
chr1:36139775|36140166 hsa-miR-211-3p 0 0 1
chr1:36139775|36140166 hsa-miR-215-5p 0 0 1
chr1:36139775|36140166 hsa-miR-215-3p 0 0 1
chr1:36139775|36140166 hsa-miR-185-5p 0 0 1
chr1:36139775|36140166 hsa-miR-185-3p 0 0 1
chr1:36139775|36140166 hsa-miR-380-5p 0 0 1
chr1:36139775|36140166 hsa-miR-380-3p 0 0 1
chr1:36139775|36140166 hsa-miR-412-5p 0 0 1
chr1:36139775|36140166 hsa-miR-412-3p 0 0 1
chr1:36139775|36140166 hsa-miR-376b-5p 0 0 1
chr1:36139775|36140166 hsa-miR-376b-3p 0 0 1
chr1:36139775|36140166 hsa-miR-578 0 0 1
chr1:36139775|36140166 hsa-miR-623 0 0 1
chr1:36139775|36140166 hsa-miR-627-5p 0 0 1
chr1:36139775|36140166 hsa-miR-627-3p 0 0 1
chr1:36139775|36140166 hsa-miR-641 0 0 1
chr1:36139775|36140166 hsa-miR-874-5p 0 0 1
chr1:36139775|36140166 hsa-miR-874-3p 0 0 1
chr1:36139775|36140166 hsa-miR-543 0 0 1
chr1:36139775|36140166 hsa-miR-924 0 0 1
chr1:36139775|36140166 hsa-miR-942-5p 0 0 1
chr1:36139775|36140166 hsa-miR-942-3p 0 0 1
chr1:36139775|36140166 hsa-miR-1229-5p 0 0 1
chr1:36139775|36140166 hsa-miR-1229-3p 0 0 1
chr1:36139775|36140166 hsa-miR-1236-5p 0 0 1
chr1:36139775|36140166 hsa-miR-1236-3p 0 0 1
chr1:36139775|36140166 hsa-miR-1303 1 0 1
chr1:36139775|36140166 hsa-miR-1257 0 0 1
chr1:36139775|36140166 hsa-miR-1272 0 0 1
chr1:36139775|36140166 hsa-miR-146b-3p 0 0 1
chr1:36139775|36140166 hsa-miR-1289 0 0 1
chr1:36139775|36140166 hsa-miR-1225-5p 0 0 1
chr1:36139775|36140166 hsa-miR-1207-3p 0 0 1
chr1:36139775|36140166 hsa-miR-576-3p 0 0 1
chr1:36139775|36140166 hsa-miR-376a 0 0 1
chr1:36139775|36140166 hsa-miR-151-3p 0 0 1
chr1:36139775|36140166 hsa-miR-612 1 0 0
chr1:36139775|36140166 hsa-miR-2117 1 0 0
chr1:36139775|36140166 hsa-miR-4429 1 0 0
chr1:36139775|36140166 hsa-miR-4672 1 0 0
chr1:36139775|36140166 hsa-miR-4682 1 0 0
chr1:36139775|36140166 hsa-miR-5093 1 0 0
chr1:36139775|36140166 hsa-miR-6860 1 0 0
chr1:36139775|36140166 hsa-miR-7703 1 0 0
chr1:36139775|36140166 hsa-miR-8077 1 0 0
chr1:36139775|36140166 hsa-miR-128-1-5p 1 0 0
chr1:36139775|36140166 hsa-miR-122-5p 1 0 0
chr1:36139775|36140166 hsa-miR-6894-5p 1 0 0
chr1:36139775|36140166 hsa-miR-6881-3p 1 0 0
chr1:36139775|36140166 hsa-miR-6832-3p 1 0 0
chr1:36139775|36140166 hsa-miR-877-3p 1 0 0
chr1:36139775|36140166 hsa-miR-1224-5p 1 0 0
chr1:36139775|36140166 hsa-miR-4753-3p 1 0 0
chr1:36139775|36140166 hsa-miR-6809-3p 1 0 0
chr1:36139775|36140166 hsa-miR-7111-3p 1 0 0
chr1:36139775|36140166 hsa-miR-3162-5p 1 0 0
chr1:36139775|36140166 hsa-miR-4646-3p 1 0 0
chr1:36139775|36140166 hsa-miR-664b-5p 1 0 0
chr1:36139775|36140166 hsa-miR-345-5p 1 0 0
chr1:36139775|36140166 hsa-miR-4732-3p 1 0 0
chr1:36139775|36140166 hsa-miR-3620-3p 1 0 0
chr1:36139775|36140166 hsa-miR-6812-3p 1 0 0
chr1:36139775|36140166 hsa-miR-5007-5p 1 0 0
chr1:36139775|36140166 hsa-miR-1249-5p 1 0 0
chr1:36139775|36140166 hsa-miR-4685-5p 1 0 0
chr1:36139775|36140166 hsa-miR-4758-5p 1 0 0
chr1:36139775|36140166 hsa-miR-365a-5p 1 0 0
chr1:36139775|36140166 hsa-miR-365b-5p 1 0 0
chr1:36139775|36140166 hsa-miR-6511a-5p 1 0 0
chr1:36139775|36140166 hsa-miR-3198 1 0 0
chr1:36139775|36140166 hsa-miR-10400-3p 1 0 0
chr1:36139775|36140166 hsa-miR-6891-3p 1 0 0
chr1:36139775|36140166 hsa-miR-4482-5p 1 0 0
chr1:36139775|36140166 hsa-miR-6766-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:36139775|36140166
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MYPKCWLRKRENPVLSSKGQCRLSVLGGPISVSPMKELTHILSSCLFTSSSFS
Nucleotide Sequence ATGTACCCAAAATGTTGGCTAAGAAAGAGAGAGAACCCTGTTTTAAGCTCTAAAGGACAATGTAGACTCAGTGTGCTGGGAGGCCCCATTTCTGTCTCTCCTATGAAGGAGCTCACTCACATTTTGTCCAGCTGTTTATTCACATCTTCATCATTTTCATAG

CircID chr1:36139775|36140166
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MMESKCLMFEHKVVGGKGKMGIISKTSQ
Nucleotide Sequence ATGATGGAGTCTAAATGTCTTATGTTTGAACATAAGGTTGTTGGTGGTAAAGGGAAAATGGGGATAATCTCAAAAACATCCCAGTAA

CircID chr1:36139775|36140166
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MTYGALVTQLCKDYENDEDVNKQLDKM
Nucleotide Sequence CTGACCTATGGTGCCCTGGTCACCCAGCTATGTAAGGACTATGAAAATGATGAAGATGTGAATAAACAGCTGGACAAAATGTGA

CircID chr1:36139775|36140166
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MGPPSTLSLHCPLELKTGFSLFLSQHFGYISH
Nucleotide Sequence ATGGGGCCTCCCAGCACACTGAGTCTACATTGTCCTTTAGAGCTTAAAACAGGGTTCTCTCTCTTTCTTAGCCAACATTTTGGGTACATTTCTCACTAA

CircID chr1:36139775|36140166
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MFKHKTFRLHHSLFSNFLPRGFNIGVRLIEDFLA
Nucleotide Sequence ATGTTCAAACATAAGACATTTAGACTCCATCATAGTCTCTTCTCTAACTTCCTTCCCAGGGGCTTTAACATTGGAGTCCGGCTGATTGAAGATTTCTTGGCT

CircID chr1:36139775|36140166
ORF Type ORF6
Protein Length 54
Nucleotide Length 165
Protein Sequence MGTFLTKLIYWDVFEIIPIFPLPPTTLCSNIRHLDSIIVSSLTSFPGALTLESG
Nucleotide Sequence TTGGGTACATTTCTCACTAAACTCATTTACTGGGATGTTTTTGAGATTATCCCCATTTTCCCTTTACCACCAACAACCTTATGTTCAAACATAAGACATTTAGACTCCATCATAGTCTCTTCTCTAACTTCCTTCCCAGGGGCTTTAACATTGGAGTCCGGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites