CircRNA Information

General Information
circRNA Basic Information
CircID chr1:36171260|36171581
Strand +
CircType exon
Host Gene ENSG00000116871.14;
Algorism CIRI2;
Sequence CCAGGTACTTGGCCCGCTCTTCTCGCCGCTCCTTTGCCAGCTTGTGTCTCTCTCCTGCCTTCTTCACCTCTGAGCAGAGGGAACAAGAACAGACAGGTCAAAAGGCTGTCCCCAAAGAGGAGTCAGCCTCAGATCCCTCCCTCCGGGCCTCACCCCATCCTTTCTTTATCTCCTCTAGGGCAAACAGGACTCTTTCAGTTGGCATGATCCAGGGCCAGGACCCTGAGCCAAGAGGTTTAGGCCCAGGCCGGGGTCATTACACACACCTTGCTTGGTGGGAGGGCTGTCGGAGGCTGGCACTGCTGTTGGAGATGGCTGGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:36171260|36171581 hsa-miR-192-5p 0 0 1
chr1:36171260|36171581 hsa-miR-192-3p 0 0 1
chr1:36171260|36171581 hsa-miR-215-5p 0 0 1
chr1:36171260|36171581 hsa-miR-215-3p 0 0 1
chr1:36171260|36171581 hsa-miR-185-5p 0 0 1
chr1:36171260|36171581 hsa-miR-185-3p 0 0 1
chr1:36171260|36171581 hsa-miR-186-5p 0 0 1
chr1:36171260|36171581 hsa-miR-186-3p 0 0 1
chr1:36171260|36171581 hsa-miR-328-5p 0 0 1
chr1:36171260|36171581 hsa-miR-328-3p 0 0 1
chr1:36171260|36171581 hsa-miR-345-5p 0 0 1
chr1:36171260|36171581 hsa-miR-345-3p 0 0 1
chr1:36171260|36171581 hsa-miR-577 0 0 1
chr1:36171260|36171581 hsa-miR-578 0 0 1
chr1:36171260|36171581 hsa-miR-608 1 0 1
chr1:36171260|36171581 hsa-miR-619-5p 0 0 1
chr1:36171260|36171581 hsa-miR-619-3p 0 0 1
chr1:36171260|36171581 hsa-miR-631 0 0 1
chr1:36171260|36171581 hsa-miR-661 0 1 1
chr1:36171260|36171581 hsa-miR-874-5p 0 0 1
chr1:36171260|36171581 hsa-miR-874-3p 0 0 1
chr1:36171260|36171581 hsa-miR-877-5p 0 0 1
chr1:36171260|36171581 hsa-miR-877-3p 0 0 1
chr1:36171260|36171581 hsa-miR-940 0 0 1
chr1:36171260|36171581 hsa-miR-1234-3p 0 0 1
chr1:36171260|36171581 hsa-miR-1202 1 1 1
chr1:36171260|36171581 hsa-miR-1291 0 1 1
chr1:36171260|36171581 hsa-miR-1253 0 0 1
chr1:36171260|36171581 hsa-miR-1266-5p 0 0 1
chr1:36171260|36171581 hsa-miR-1266-3p 0 0 1
chr1:36171260|36171581 hsa-miR-1321 0 0 1
chr1:36171260|36171581 hsa-miR-1234 0 0 1
chr1:36171260|36171581 hsa-miR-532-3p 1 1 1
chr1:36171260|36171581 hsa-miR-485-5p 0 0 1
chr1:36171260|36171581 hsa-miR-1224-3p 0 0 1
chr1:36171260|36171581 hsa-miR-767-3p 0 0 1
chr1:36171260|36171581 hsa-miR-342-5p 0 0 1
chr1:36171260|36171581 hsa-miR-515-5p 0 1 1
chr1:36171260|36171581 hsa-miR-1260 0 0 1
chr1:36171260|36171581 hsa-miR-1280 0 0 1
chr1:36171260|36171581 hsa-miR-642 0 0 1
chr1:36171260|36171581 hsa-miR-9 0 0 1
chr1:36171260|36171581 hsa-miR-24 0 0 1
chr1:36171260|36171581 hsa-miR-198 1 0 0
chr1:36171260|36171581 hsa-miR-638 1 0 0
chr1:36171260|36171581 hsa-miR-663a 1 0 0
chr1:36171260|36171581 hsa-miR-658 1 0 0
chr1:36171260|36171581 hsa-miR-762 1 0 0
chr1:36171260|36171581 hsa-miR-765 1 0 0
chr1:36171260|36171581 hsa-miR-665 1 0 0
chr1:36171260|36171581 hsa-miR-760 1 0 0
chr1:36171260|36171581 hsa-miR-663b 1 0 0
chr1:36171260|36171581 hsa-miR-1470 1 0 0
chr1:36171260|36171581 hsa-miR-1538 1 0 0
chr1:36171260|36171581 hsa-miR-3125 1 0 0
chr1:36171260|36171581 hsa-miR-3132 1 0 0
chr1:36171260|36171581 hsa-miR-3154 1 0 0
chr1:36171260|36171581 hsa-miR-3176 0 1 0
chr1:36171260|36171581 hsa-miR-3185 1 1 0
chr1:36171260|36171581 hsa-miR-3196 1 0 0
chr1:36171260|36171581 hsa-miR-3197 0 1 0
chr1:36171260|36171581 hsa-miR-4257 0 1 0
chr1:36171260|36171581 hsa-miR-4281 1 0 0
chr1:36171260|36171581 hsa-miR-4421 0 1 0
chr1:36171260|36171581 hsa-miR-4467 1 0 0
chr1:36171260|36171581 hsa-miR-4487 1 0 0
chr1:36171260|36171581 hsa-miR-4506 1 0 0
chr1:36171260|36171581 hsa-miR-2392 1 1 0
chr1:36171260|36171581 hsa-miR-4510 0 1 0
chr1:36171260|36171581 hsa-miR-4519 0 1 0
chr1:36171260|36171581 hsa-miR-4533 1 0 0
chr1:36171260|36171581 hsa-miR-3960 1 0 0
chr1:36171260|36171581 hsa-miR-3972 1 1 0
chr1:36171260|36171581 hsa-miR-4644 0 1 0
chr1:36171260|36171581 hsa-miR-4651 1 0 0
chr1:36171260|36171581 hsa-miR-4656 1 0 0
chr1:36171260|36171581 hsa-miR-4688 1 0 0
chr1:36171260|36171581 hsa-miR-4689 1 0 0
chr1:36171260|36171581 hsa-miR-4706 1 0 0
chr1:36171260|36171581 hsa-miR-4710 1 1 0
chr1:36171260|36171581 hsa-miR-4739 1 1 0
chr1:36171260|36171581 hsa-miR-4784 1 1 0
chr1:36171260|36171581 hsa-miR-5194 1 0 0
chr1:36171260|36171581 hsa-miR-5572 1 0 0
chr1:36171260|36171581 hsa-miR-5739 1 0 0
chr1:36171260|36171581 hsa-miR-5787 1 0 0
chr1:36171260|36171581 hsa-miR-6081 1 0 0
chr1:36171260|36171581 hsa-miR-6088 1 0 0
chr1:36171260|36171581 hsa-miR-6090 1 0 0
chr1:36171260|36171581 hsa-miR-6125 1 0 0
chr1:36171260|36171581 hsa-miR-6127 1 1 0
chr1:36171260|36171581 hsa-miR-6130 0 1 0
chr1:36171260|36171581 hsa-miR-6133 1 1 0
chr1:36171260|36171581 hsa-miR-6165 1 0 0
chr1:36171260|36171581 hsa-miR-8072 1 0 0
chr1:36171260|36171581 hsa-miR-8085 1 0 0
chr1:36171260|36171581 hsa-miR-211-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4433b-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6749-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4747-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6734-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6747-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4433a-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6765-5p 1 0 0
chr1:36171260|36171581 hsa-miR-3150a-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6799-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6510-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6728-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6833-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6089 1 0 0
chr1:36171260|36171581 hsa-miR-6757-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6880-5p 1 0 0
chr1:36171260|36171581 hsa-miR-7847-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4695-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6867-5p 0 1 0
chr1:36171260|36171581 hsa-miR-6746-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4653-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4722-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6890-5p 1 1 0
chr1:36171260|36171581 hsa-miR-3622b-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4677-5p 0 1 0
chr1:36171260|36171581 hsa-miR-197-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6849-3p 1 1 0
chr1:36171260|36171581 hsa-miR-6742-5p 1 0 0
chr1:36171260|36171581 hsa-miR-3151-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6796-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6732-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6881-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6782-5p 1 1 0
chr1:36171260|36171581 hsa-miR-3194-5p 0 1 0
chr1:36171260|36171581 hsa-miR-3150b-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6810-5p 0 1 0
chr1:36171260|36171581 hsa-miR-5008-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6858-3p 1 1 0
chr1:36171260|36171581 hsa-miR-6786-5p 1 0 0
chr1:36171260|36171581 hsa-miR-939-3p 0 1 0
chr1:36171260|36171581 hsa-miR-1226-5p 1 0 0
chr1:36171260|36171581 hsa-miR-2277-3p 1 0 0
chr1:36171260|36171581 hsa-miR-296-3p 1 0 0
chr1:36171260|36171581 hsa-miR-642b-5p 0 1 0
chr1:36171260|36171581 hsa-miR-4446-3p 1 0 0
chr1:36171260|36171581 hsa-miR-149-3p 1 1 0
chr1:36171260|36171581 hsa-miR-3616-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6824-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6789-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6781-5p 1 0 0
chr1:36171260|36171581 hsa-miR-450a-2-3p 0 1 0
chr1:36171260|36171581 hsa-miR-4707-5p 1 1 0
chr1:36171260|36171581 hsa-miR-3120-5p 0 1 0
chr1:36171260|36171581 hsa-miR-4687-5p 1 1 0
chr1:36171260|36171581 hsa-miR-2276-5p 0 1 0
chr1:36171260|36171581 hsa-miR-4746-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4761-5p 0 1 0
chr1:36171260|36171581 hsa-miR-605-3p 0 1 0
chr1:36171260|36171581 hsa-miR-6856-3p 0 1 0
chr1:36171260|36171581 hsa-miR-483-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4649-3p 0 1 0
chr1:36171260|36171581 hsa-miR-4766-5p 0 1 0
chr1:36171260|36171581 hsa-miR-188-3p 1 0 0
chr1:36171260|36171581 hsa-miR-3157-3p 0 1 0
chr1:36171260|36171581 hsa-miR-10400-5p 1 0 0
chr1:36171260|36171581 hsa-miR-1207-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4763-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6812-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6816-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6865-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6893-5p 1 0 0
chr1:36171260|36171581 hsa-miR-5001-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6737-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6743-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6756-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6819-5p 1 1 0
chr1:36171260|36171581 hsa-miR-7107-5p 1 1 0
chr1:36171260|36171581 hsa-miR-11181-3p 1 0 0
chr1:36171260|36171581 hsa-miR-1249-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6722-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6779-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6797-5p 1 1 0
chr1:36171260|36171581 hsa-miR-6808-5p 0 1 0
chr1:36171260|36171581 hsa-miR-6879-5p 1 0 0
chr1:36171260|36171581 hsa-miR-7111-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4728-5p 1 1 0
chr1:36171260|36171581 hsa-miR-5196-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6780b-5p 1 0 0
chr1:36171260|36171581 hsa-miR-10396b-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4632-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4649-5p 1 0 0
chr1:36171260|36171581 hsa-miR-4745-3p 1 0 0
chr1:36171260|36171581 hsa-miR-4745-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6735-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6795-5p 1 1 0
chr1:36171260|36171581 hsa-miR-4436b-3p 1 0 0
chr1:36171260|36171581 hsa-miR-939-5p 1 0 0
chr1:36171260|36171581 hsa-miR-5586-3p 1 0 0
chr1:36171260|36171581 hsa-miR-3085-5p 1 0 0
chr1:36171260|36171581 hsa-miR-3198 1 0 0
chr1:36171260|36171581 hsa-miR-6856-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6736-5p 1 0 0
chr1:36171260|36171581 hsa-miR-10398-3p 0 1 0
chr1:36171260|36171581 hsa-miR-3679-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6891-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6785-5p 0 1 0
chr1:36171260|36171581 hsa-miR-6724-5p 1 0 0
chr1:36171260|36171581 hsa-miR-7107-3p 0 1 0
chr1:36171260|36171581 hsa-miR-9851-5p 0 1 0
chr1:36171260|36171581 hsa-miR-6862-3p 1 0 0
chr1:36171260|36171581 hsa-miR-6775-3p 1 0 0
chr1:36171260|36171581 hsa-miR-504-5p 0 1 0
chr1:36171260|36171581 hsa-miR-6876-3p 0 1 0
chr1:36171260|36171581 hsa-miR-3619-5p 1 0 0
chr1:36171260|36171581 hsa-miR-6838-5p 1 1 0
chr1:36171260|36171581 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:36171260|36171581
ORF Type ORF1
Protein Length 57
Nucleotide Length 174
Protein Sequence MPACVSLLPSSPLSRGNKNRQVKRLSPKRSQPQIPPSGPHPILSLSPLGQTGLFQLA
Nucleotide Sequence TTGCCAGCTTGTGTCTCTCTCCTGCCTTCTTCACCTCTGAGCAGAGGGAACAAGAACAGACAGGTCAAAAGGCTGTCCCCAAAGAGGAGTCAGCCTCAGATCCCTCCCTCCGGGCCTCACCCCATCCTTTCTTTATCTCCTCTAGGGCAAACAGGACTCTTTCAGTTGGCATGA
CircID chr1:36171260|36171581
ORF Type ORF2
Protein Length 104
Nucleotide Length 312
Protein Sequence MARSSRRSFASLCLSPAFFTSEQREQEQTGQKAVPKEESASDPSLRASPHPFFISSRANRTLSVGMIQGQDPEPRGLGPGRGHYTHLAWWEGCRRLALLLEMAG
Nucleotide Sequence TTGGCCCGCTCTTCTCGCCGCTCCTTTGCCAGCTTGTGTCTCTCTCCTGCCTTCTTCACCTCTGAGCAGAGGGAACAAGAACAGACAGGTCAAAAGGCTGTCCCCAAAGAGGAGTCAGCCTCAGATCCCTCCCTCCGGGCCTCACCCCATCCTTTCTTTATCTCCTCTAGGGCAAACAGGACTCTTTCAGTTGGCATGATCCAGGGCCAGGACCCTGAGCCAAGAGGTTTAGGCCCAGGCCGGGGTCATTACACACACCTTGCTTGGTGGGAGGGCTGTCGGAGGCTGGCACTGCTGTTGGAGATGGCTGGC
CircID chr1:36171260|36171581
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MPTERVLFALEEIKKGWGEARREGSEADSSLGTAF
Nucleotide Sequence ATGCCAACTGAAAGAGTCCTGTTTGCCCTAGAGGAGATAAAGAAAGGATGGGGTGAGGCCCGGAGGGAGGGATCTGAGGCTGACTCCTCTTTGGGGACAGCCTTTTGA
CircID chr1:36171260|36171581
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MTCLFLFPLLRGEEGRRETQAGKGAARRAGQVP
Nucleotide Sequence TTGACCTGTCTGTTCTTGTTCCCTCTGCTCAGAGGTGAAGAAGGCAGGAGAGAGACACAAGCTGGCAAAGGAGCGGCGAGAAGAGCGGGCCAAGTACCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab