CircRNA Information

General Information
circRNA Basic Information
CircID chr1:36287784|36287955
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGTCCCAGTGCAACTTCCCTGTAACCTCTCTGCCATCCCAATCCATCCAACCATACAAACAAAGATTCATGTTCCAACTCACCGTGTCCCCCAGGGGAGAAAGACGGAAGCACTGTCATGTCCTCTCCTAACACGCAGCCGTGTTGGCTTCTACTGGGACATACACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:36287784|36287955 hsa-miR-520f-5p 0 0 1
chr1:36287784|36287955 hsa-miR-520f-3p 0 0 1
chr1:36287784|36287955 hsa-miR-567 0 0 1
chr1:36287784|36287955 hsa-miR-571 0 0 1
chr1:36287784|36287955 hsa-miR-584-5p 0 0 1
chr1:36287784|36287955 hsa-miR-584-3p 0 0 1
chr1:36287784|36287955 hsa-miR-604 0 0 1
chr1:36287784|36287955 hsa-miR-609 0 0 1
chr1:36287784|36287955 hsa-miR-625-5p 0 0 1
chr1:36287784|36287955 hsa-miR-625-3p 0 0 1
chr1:36287784|36287955 hsa-miR-637 0 0 1
chr1:36287784|36287955 hsa-miR-936 0 0 1
chr1:36287784|36287955 hsa-miR-297 0 0 1
chr1:36287784|36287955 hsa-miR-1246 0 0 1
chr1:36287784|36287955 hsa-miR-1258 0 1 1
chr1:36287784|36287955 hsa-miR-1275 0 1 1
chr1:36287784|36287955 hsa-miR-331-3p 0 0 1
chr1:36287784|36287955 hsa-miR-769-3p 0 0 1
chr1:36287784|36287955 hsa-miR-450b-3p 0 0 1
chr1:36287784|36287955 hsa-miR-516a-3p 0 0 1
chr1:36287784|36287955 hsa-miR-219-1-3p 0 0 1
chr1:36287784|36287955 hsa-miR-608 1 0 0
chr1:36287784|36287955 hsa-miR-638 1 0 0
chr1:36287784|36287955 hsa-miR-762 1 0 0
chr1:36287784|36287955 hsa-miR-3132 1 0 0
chr1:36287784|36287955 hsa-miR-3165 1 0 0
chr1:36287784|36287955 hsa-miR-1193 1 1 0
chr1:36287784|36287955 hsa-miR-3196 1 0 0
chr1:36287784|36287955 hsa-miR-4298 1 0 0
chr1:36287784|36287955 hsa-miR-4259 1 0 0
chr1:36287784|36287955 hsa-miR-4270 1 0 0
chr1:36287784|36287955 hsa-miR-3911 1 0 0
chr1:36287784|36287955 hsa-miR-4425 1 0 0
chr1:36287784|36287955 hsa-miR-4462 1 1 0
chr1:36287784|36287955 hsa-miR-4498 1 0 0
chr1:36287784|36287955 hsa-miR-4507 1 0 0
chr1:36287784|36287955 hsa-miR-4525 1 0 0
chr1:36287784|36287955 hsa-miR-4534 1 0 0
chr1:36287784|36287955 hsa-miR-1587 1 0 0
chr1:36287784|36287955 hsa-miR-3960 1 0 0
chr1:36287784|36287955 hsa-miR-4651 1 0 0
chr1:36287784|36287955 hsa-miR-4739 1 0 0
chr1:36287784|36287955 hsa-miR-5194 1 0 0
chr1:36287784|36287955 hsa-miR-5572 1 0 0
chr1:36287784|36287955 hsa-miR-5698 1 0 0
chr1:36287784|36287955 hsa-miR-6086 1 0 0
chr1:36287784|36287955 hsa-miR-6745 1 0 0
chr1:36287784|36287955 hsa-miR-8056 1 0 0
chr1:36287784|36287955 hsa-miR-8060 1 0 0
chr1:36287784|36287955 hsa-miR-8082 1 0 0
chr1:36287784|36287955 hsa-miR-8085 1 0 0
chr1:36287784|36287955 hsa-miR-8089 1 0 0
chr1:36287784|36287955 hsa-miR-92a-1-5p 1 0 0
chr1:36287784|36287955 hsa-miR-4731-5p 1 1 0
chr1:36287784|36287955 hsa-miR-6799-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6728-5p 1 1 0
chr1:36287784|36287955 hsa-miR-8071 1 0 0
chr1:36287784|36287955 hsa-miR-139-3p 1 0 0
chr1:36287784|36287955 hsa-miR-5187-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6757-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6867-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6744-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6820-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6741-5p 1 0 0
chr1:36287784|36287955 hsa-miR-197-5p 1 0 0
chr1:36287784|36287955 hsa-miR-8069 1 0 0
chr1:36287784|36287955 hsa-miR-6748-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6793-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6796-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6798-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6782-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6821-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6810-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6786-5p 1 0 0
chr1:36287784|36287955 hsa-miR-1226-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6740-5p 1 1 0
chr1:36287784|36287955 hsa-miR-204-3p 1 0 0
chr1:36287784|36287955 hsa-miR-4786-3p 0 1 0
chr1:36287784|36287955 hsa-miR-1229-5p 1 0 0
chr1:36287784|36287955 hsa-miR-296-3p 1 0 0
chr1:36287784|36287955 hsa-miR-6830-3p 0 1 0
chr1:36287784|36287955 hsa-miR-149-3p 1 0 0
chr1:36287784|36287955 hsa-miR-3191-3p 1 0 0
chr1:36287784|36287955 hsa-miR-4652-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6832-5p 1 0 0
chr1:36287784|36287955 hsa-miR-758-5p 1 0 0
chr1:36287784|36287955 hsa-miR-5004-5p 0 1 0
chr1:36287784|36287955 hsa-miR-3152-3p 0 1 0
chr1:36287784|36287955 hsa-miR-1207-5p 1 1 0
chr1:36287784|36287955 hsa-miR-4763-3p 1 0 0
chr1:36287784|36287955 hsa-miR-6769b-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6812-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6865-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6870-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6737-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6756-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6769a-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6803-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6819-5p 1 0 0
chr1:36287784|36287955 hsa-miR-1249-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6751-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6763-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6779-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6780a-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6797-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6808-5p 1 0 0
chr1:36287784|36287955 hsa-miR-3620-5p 1 0 0
chr1:36287784|36287955 hsa-miR-328-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6735-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6738-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6777-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6794-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6795-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6887-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6889-5p 1 0 0
chr1:36287784|36287955 hsa-miR-4723-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6831-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6885-5p 1 0 0
chr1:36287784|36287955 hsa-miR-4769-5p 1 1 0
chr1:36287784|36287955 hsa-miR-3940-5p 1 1 0
chr1:36287784|36287955 hsa-miR-6856-5p 0 1 0
chr1:36287784|36287955 hsa-miR-1914-3p 1 0 0
chr1:36287784|36287955 hsa-miR-4665-5p 1 1 0
chr1:36287784|36287955 hsa-miR-3679-5p 1 1 0
chr1:36287784|36287955 hsa-miR-6766-5p 1 0 0
chr1:36287784|36287955 hsa-miR-6785-5p 1 0 0
chr1:36287784|36287955 hsa-miR-302c-3p 0 1 0
chr1:36287784|36287955 hsa-miR-363-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:36287784|36287955
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence LVPVQLPCNLSAIPIHPTIQTKIHVPTHRVPQGRKTEALSCPLLTRSRVGFYWDIHP
Nucleotide Sequence CTGGTCCCAGTGCAACTTCCCTGTAACCTCTCTGCCATCCCAATCCATCCAACCATACAAACAAAGATTCATGTTCCAACTCACCGTGTCCCCCAGGGGAGAAAGACGGAAGCACTGTCATGTCCTCTCCTAACACGCAGCCGTGTTGGCTTCTACTGGGACATACACCCA
CircID chr1:36287784|36287955
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MPSQSIQPYKQRFMFQLTVSPRGERRKHCHVLS
Nucleotide Sequence CTGCCATCCCAATCCATCCAACCATACAAACAAAGATTCATGTTCCAACTCACCGTGTCCCCCAGGGGAGAAAGACGGAAGCACTGTCATGTCCTCTCCTAA
CircID chr1:36287784|36287955
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MTVLPSFSPGGHGELEHESLFVWLDGLGWQRGYREVALGP
Nucleotide Sequence ATGACAGTGCTTCCGTCTTTCTCCCCTGGGGGACACGGTGAGTTGGAACATGAATCTTTGTTTGTATGGTTGGATGGATTGGGATGGCAGAGAGGTTACAGGGAAGTTGCACTGGGACCA
CircID chr1:36287784|36287955
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MGDTVSWNMNLCLYGWMDWDGREVTGKLHWDQ
Nucleotide Sequence CTGGGGGACACGGTGAGTTGGAACATGAATCTTTGTTTGTATGGTTGGATGGATTGGGATGGCAGAGAGGTTACAGGGAAGTTGCACTGGGACCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab