CircRNA Information

General Information
circRNA Basic Information
CircID chr1:37476873|37477059
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence ACAGGGTTGAGAAGGGATGATTTTCTGGCTGCCCTGAGGGAGCTCCTAGGTGGGCTGCCCAAGGCTGGCATGACATCAGCCTCTGCCCTCCCTAATTTGTGGCCCCTGTGGGACAAGTTCACTGTCCAGCTGGCCCTGGCCCAGCTCAGCAGGCATGCAGCTGAGTGCTCTTCCCTCCTTCTGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:37476873|37477059 hsa-miR-10a-5p 0 0 1
chr1:37476873|37477059 hsa-miR-10a-3p 0 0 1
chr1:37476873|37477059 hsa-miR-10b-5p 0 0 1
chr1:37476873|37477059 hsa-miR-10b-3p 0 0 1
chr1:37476873|37477059 hsa-miR-370-5p 0 0 1
chr1:37476873|37477059 hsa-miR-370-3p 0 0 1
chr1:37476873|37477059 hsa-miR-558 0 0 1
chr1:37476873|37477059 hsa-miR-635 0 0 1
chr1:37476873|37477059 hsa-miR-708-5p 0 0 1
chr1:37476873|37477059 hsa-miR-708-3p 0 0 1
chr1:37476873|37477059 hsa-miR-1202 0 1 1
chr1:37476873|37477059 hsa-miR-1266-5p 0 0 1
chr1:37476873|37477059 hsa-miR-1266-3p 0 0 1
chr1:37476873|37477059 hsa-miR-513c-5p 0 0 1
chr1:37476873|37477059 hsa-miR-513c-3p 0 0 1
chr1:37476873|37477059 hsa-miR-1321 0 0 1
chr1:37476873|37477059 hsa-miR-512-5p 0 0 1
chr1:37476873|37477059 hsa-miR-485-5p 0 1 1
chr1:37476873|37477059 hsa-miR-1224-3p 0 0 1
chr1:37476873|37477059 hsa-miR-28-5p 0 0 1
chr1:37476873|37477059 hsa-miR-1207-3p 0 0 1
chr1:37476873|37477059 hsa-miR-188-5p 0 0 1
chr1:37476873|37477059 hsa-miR-188-3p 0 0 1
chr1:37476873|37477059 hsa-miR-542-3p 0 0 1
chr1:37476873|37477059 hsa-miR-220c 0 0 1
chr1:37476873|37477059 hsa-miR-575 1 0 0
chr1:37476873|37477059 hsa-miR-612 0 1 0
chr1:37476873|37477059 hsa-miR-658 1 0 0
chr1:37476873|37477059 hsa-miR-762 1 1 0
chr1:37476873|37477059 hsa-miR-298 0 1 0
chr1:37476873|37477059 hsa-miR-1538 1 0 0
chr1:37476873|37477059 hsa-miR-3141 1 0 0
chr1:37476873|37477059 hsa-miR-3196 1 0 0
chr1:37476873|37477059 hsa-miR-4288 0 1 0
chr1:37476873|37477059 hsa-miR-3918 0 1 0
chr1:37476873|37477059 hsa-miR-3929 1 1 0
chr1:37476873|37477059 hsa-miR-4469 1 1 0
chr1:37476873|37477059 hsa-miR-4487 0 1 0
chr1:37476873|37477059 hsa-miR-1587 1 1 0
chr1:37476873|37477059 hsa-miR-4651 1 0 0
chr1:37476873|37477059 hsa-miR-4663 0 1 0
chr1:37476873|37477059 hsa-miR-4688 1 0 0
chr1:37476873|37477059 hsa-miR-4706 1 0 0
chr1:37476873|37477059 hsa-miR-4739 1 1 0
chr1:37476873|37477059 hsa-miR-4779 1 1 0
chr1:37476873|37477059 hsa-miR-6069 1 1 0
chr1:37476873|37477059 hsa-miR-6077 0 1 0
chr1:37476873|37477059 hsa-miR-6085 1 0 0
chr1:37476873|37477059 hsa-miR-6090 1 0 0
chr1:37476873|37477059 hsa-miR-6133 1 0 0
chr1:37476873|37477059 hsa-miR-8075 0 1 0
chr1:37476873|37477059 hsa-miR-12122 0 1 0
chr1:37476873|37477059 hsa-miR-128-3p 0 1 0
chr1:37476873|37477059 hsa-miR-93-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6734-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6825-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6894-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6799-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1227-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6880-5p 1 0 0
chr1:37476873|37477059 hsa-miR-4722-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6721-5p 1 1 0
chr1:37476873|37477059 hsa-miR-1178-5p 0 1 0
chr1:37476873|37477059 hsa-miR-197-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6849-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6787-3p 0 1 0
chr1:37476873|37477059 hsa-miR-2467-5p 1 0 0
chr1:37476873|37477059 hsa-miR-2467-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6858-3p 1 0 0
chr1:37476873|37477059 hsa-miR-7109-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1226-5p 1 0 0
chr1:37476873|37477059 hsa-miR-4640-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6771-5p 1 0 0
chr1:37476873|37477059 hsa-miR-149-3p 1 1 0
chr1:37476873|37477059 hsa-miR-3616-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6824-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6789-5p 1 0 0
chr1:37476873|37477059 hsa-miR-3162-5p 0 1 0
chr1:37476873|37477059 hsa-miR-6781-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6877-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6895-5p 0 1 0
chr1:37476873|37477059 hsa-miR-3922-5p 1 0 0
chr1:37476873|37477059 hsa-miR-10400-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1207-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1233-5p 1 0 0
chr1:37476873|37477059 hsa-miR-4763-3p 1 1 0
chr1:37476873|37477059 hsa-miR-6816-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6743-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6813-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6851-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1249-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6722-3p 1 0 0
chr1:37476873|37477059 hsa-miR-6774-5p 0 1 0
chr1:37476873|37477059 hsa-miR-6779-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6780a-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6797-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6879-5p 0 1 0
chr1:37476873|37477059 hsa-miR-320a-5p 0 1 0
chr1:37476873|37477059 hsa-miR-3620-5p 1 1 0
chr1:37476873|37477059 hsa-miR-4728-5p 1 1 0
chr1:37476873|37477059 hsa-miR-5189-5p 1 0 0
chr1:37476873|37477059 hsa-miR-5196-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6780b-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6836-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1909-3p 1 0 0
chr1:37476873|37477059 hsa-miR-328-5p 1 0 0
chr1:37476873|37477059 hsa-miR-4632-5p 0 1 0
chr1:37476873|37477059 hsa-miR-4649-5p 1 0 0
chr1:37476873|37477059 hsa-miR-4685-5p 0 1 0
chr1:37476873|37477059 hsa-miR-4725-3p 1 0 0
chr1:37476873|37477059 hsa-miR-4726-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6729-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6735-5p 0 1 0
chr1:37476873|37477059 hsa-miR-6795-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6858-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6883-5p 1 1 0
chr1:37476873|37477059 hsa-miR-4436b-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6845-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6885-5p 1 0 0
chr1:37476873|37477059 hsa-miR-1271-3p 1 1 0
chr1:37476873|37477059 hsa-miR-7843-5p 1 1 0
chr1:37476873|37477059 hsa-miR-1914-3p 1 0 0
chr1:37476873|37477059 hsa-miR-6785-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6724-5p 1 0 0
chr1:37476873|37477059 hsa-miR-6762-5p 1 1 0
chr1:37476873|37477059 hsa-miR-6837-5p 1 1 0
chr1:37476873|37477059 hsa-miR-4756-5p 1 1 0
chr1:37476873|37477059 hsa-miR-4690-3p 0 1 0
chr1:37476873|37477059 hsa-miR-6807-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:37476873|37477059
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MRRDDFLAALRELLGGLPKAGMTSASALPNLWPLWDKFTVQLALAQLSRHAAECSSLLLS
Nucleotide Sequence TTGAGAAGGGATGATTTTCTGGCTGCCCTGAGGGAGCTCCTAGGTGGGCTGCCCAAGGCTGGCATGACATCAGCCTCTGCCCTCCCTAATTTGTGGCCCCTGTGGGACAAGTTCACTGTCCAGCTGGCCCTGGCCCAGCTCAGCAGGCATGCAGCTGAGTGCTCTTCCCTCCTTCTGTCA
CircID chr1:37476873|37477059
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MPSLICGPCGTSSLSSWPWPSSAGMQLSALPSFCH
Nucleotide Sequence CTGCCCTCCCTAATTTGTGGCCCCTGTGGGACAAGTTCACTGTCCAGCTGGCCCTGGCCCAGCTCAGCAGGCATGCAGCTGAGTGCTCTTCCCTCCTTCTGTCAC
CircID chr1:37476873|37477059
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MMSCQPWAAHLGAPSGQPENHPFSTL
Nucleotide Sequence CTGATGTCATGCCAGCCTTGGGCAGCCCACCTAGGAGCTCCCTCAGGGCAGCCAGAAAATCATCCCTTCTCAACCCTG
CircID chr1:37476873|37477059
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MPAELGQGQLDSELVPQGPQIREGRG
Nucleotide Sequence ATGCCTGCTGAGCTGGGCCAGGGCCAGCTGGACAGTGAACTTGTCCCACAGGGGCCACAAATTAGGGAGGGCAGAGGCTGA
CircID chr1:37476873|37477059
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MLSWARASWTVNLSHRGHKLGRAEADVMPALGSPPRSSLRAARKSSLLNP
Nucleotide Sequence CTGCTGAGCTGGGCCAGGGCCAGCTGGACAGTGAACTTGTCCCACAGGGGCCACAAATTAGGGAGGGCAGAGGCTGATGTCATGCCAGCCTTGGGCAGCCCACCTAGGAGCTCCCTCAGGGCAGCCAGAAAATCATCCCTTCTCAACCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab