CircRNA Information

General Information
circRNA Basic Information
CircID chr1:37794585|37794713
Strand -
CircType exon
Host Gene ENSG00000185090.13;
Algorism CIRI2;
Sequence CCCAAGATCTCGGCCAGCTACCCCCGCGGCCGCCACAGCCCCCCAGACGACTTGGGCTCCAGCTTCTACCCGGAGCTGGGGCCCTACAGCTCCCGGGACCCCGAAGTGCTGCGGGAGCATATGACCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:37794585|37794713 hsa-miR-635 0 0 1
chr1:37794585|37794713 hsa-miR-637 1 1 1
chr1:37794585|37794713 hsa-miR-1296-5p 0 0 1
chr1:37794585|37794713 hsa-miR-1296-3p 0 0 1
chr1:37794585|37794713 hsa-miR-920 0 1 1
chr1:37794585|37794713 hsa-miR-296-5p 0 0 1
chr1:37794585|37794713 hsa-miR-615-5p 0 1 1
chr1:37794585|37794713 hsa-miR-762 1 0 0
chr1:37794585|37794713 hsa-miR-760 1 0 0
chr1:37794585|37794713 hsa-miR-3132 0 1 0
chr1:37794585|37794713 hsa-miR-4281 0 1 0
chr1:37794585|37794713 hsa-miR-1268b 1 0 0
chr1:37794585|37794713 hsa-miR-4449 0 1 0
chr1:37794585|37794713 hsa-miR-3135b 0 1 0
chr1:37794585|37794713 hsa-miR-4508 1 0 0
chr1:37794585|37794713 hsa-miR-3960 1 0 0
chr1:37794585|37794713 hsa-miR-4651 1 0 0
chr1:37794585|37794713 hsa-miR-4660 0 1 0
chr1:37794585|37794713 hsa-miR-4741 1 1 0
chr1:37794585|37794713 hsa-miR-5572 0 1 0
chr1:37794585|37794713 hsa-miR-5787 1 0 0
chr1:37794585|37794713 hsa-miR-1247-3p 0 1 0
chr1:37794585|37794713 hsa-miR-4665-3p 1 1 0
chr1:37794585|37794713 hsa-miR-6089 1 0 0
chr1:37794585|37794713 hsa-miR-3192-5p 1 1 0
chr1:37794585|37794713 hsa-miR-874-5p 0 1 0
chr1:37794585|37794713 hsa-miR-7108-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6732-5p 0 1 0
chr1:37794585|37794713 hsa-miR-6835-5p 1 1 0
chr1:37794585|37794713 hsa-miR-885-3p 1 0 0
chr1:37794585|37794713 hsa-miR-4650-3p 0 1 0
chr1:37794585|37794713 hsa-miR-3648 1 1 0
chr1:37794585|37794713 hsa-miR-4787-5p 1 1 0
chr1:37794585|37794713 hsa-miR-7160-3p 0 1 0
chr1:37794585|37794713 hsa-miR-383-3p 0 1 0
chr1:37794585|37794713 hsa-miR-6770-3p 0 1 0
chr1:37794585|37794713 hsa-miR-10400-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6787-5p 1 1 0
chr1:37794585|37794713 hsa-miR-5001-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6726-5p 0 1 0
chr1:37794585|37794713 hsa-miR-6737-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6752-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6803-5p 1 1 0
chr1:37794585|37794713 hsa-miR-6819-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6842-5p 1 0 0
chr1:37794585|37794713 hsa-miR-7110-5p 1 0 0
chr1:37794585|37794713 hsa-miR-6751-5p 1 0 0
chr1:37794585|37794713 hsa-miR-1237-5p 1 0 0
chr1:37794585|37794713 hsa-miR-328-5p 1 1 0
chr1:37794585|37794713 hsa-miR-6846-5p 1 1 0
chr1:37794585|37794713 hsa-miR-6848-5p 1 1 0
chr1:37794585|37794713 hsa-miR-6885-5p 1 0 0
chr1:37794585|37794713 hsa-miR-939-5p 1 1 0
chr1:37794585|37794713 hsa-miR-5008-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:37794585|37794713
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MGSSFYPELGPYSSRDPEVLREHMTQ
Nucleotide Sequence TTGGGCTCCAGCTTCTACCCGGAGCTGGGGCCCTACAGCTCCCGGGACCCCGAAGTGCTGCGGGAGCATATGACCCAG

CircID chr1:37794585|37794713
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence LGHMLPQHFGVPGAVGPQLRVEAGAQVVWGAVAAAGVAGRDLG
Nucleotide Sequence CTGGGTCATATGCTCCCGCAGCACTTCGGGGTCCCGGGAGCTGTAGGGCCCCAGCTCCGGGTAGAAGCTGGAGCCCAAGTCGTCTGGGGGGCTGTGGCGGCCGCGGGGGTAGCTGGCCGAGATCTTGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites