CircNet

General Information

circRNA Basic Information

CircID	chr1:39387807\|39387986
Strand	-
CircType	exon
Host Gene	ENSG00000127603.22;
Algorism	CIRI2;
Sequence	CAGAACATGGATGCTGTTACAGAAGAGCTGCAGGCCAAAACAGGGTCACTCGAAGAAATGACTCAGAGGCTCAGGGAGTTCCAGGAAAGCTTTAAGAATATTGAAAAGAAGGTTGAAGGAGCCAAACACCAACTTGAGATCTTTGATGCTCTGGGTTCTCAAGCCTGTAGCAACAAGAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:39387807\|39387986	hsa-miR-10a-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-10a-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-10b-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-10b-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-205-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-205-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-221-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-221-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-222-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-222-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-146a-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-146a-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-320a-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-320a-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-504-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-504-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-578	0	1	1
chr1:39387807\|39387986	hsa-miR-580-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-580-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-589-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-589-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-1301-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-1301-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-1305	0	0	1
chr1:39387807\|39387986	hsa-miR-1248	0	0	1
chr1:39387807\|39387986	hsa-miR-513c-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-513c-3p	0	0	1
chr1:39387807\|39387986	hsa-miR-1184	1	0	1
chr1:39387807\|39387986	hsa-miR-320b	0	0	1
chr1:39387807\|39387986	hsa-miR-320c	0	0	1
chr1:39387807\|39387986	hsa-miR-125a-5p	0	1	1
chr1:39387807\|39387986	hsa-miR-320d	0	0	1
chr1:39387807\|39387986	hsa-miR-146b-5p	0	0	1
chr1:39387807\|39387986	hsa-miR-125b	0	0	1
chr1:39387807\|39387986	hsa-miR-1274b	0	0	1
chr1:39387807\|39387986	hsa-miR-1300	0	0	1
chr1:39387807\|39387986	hsa-miR-194	0	0	1
chr1:39387807\|39387986	hsa-miR-1200	1	1	0
chr1:39387807\|39387986	hsa-miR-4292	1	0	0
chr1:39387807\|39387986	hsa-miR-4438	0	1	0
chr1:39387807\|39387986	hsa-miR-4660	0	1	0
chr1:39387807\|39387986	hsa-miR-5047	0	1	0
chr1:39387807\|39387986	hsa-miR-6762-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-6735-3p	1	1	0
chr1:39387807\|39387986	hsa-miR-939-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-7113-3p	0	1	0
chr1:39387807\|39387986	hsa-miR-194-5p	0	1	0
chr1:39387807\|39387986	hsa-miR-5088-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-3124-3p	0	1	0
chr1:39387807\|39387986	hsa-miR-670-5p	0	1	0
chr1:39387807\|39387986	hsa-miR-1199-5p	1	0	0
chr1:39387807\|39387986	hsa-miR-6877-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-7151-3p	0	1	0
chr1:39387807\|39387986	hsa-miR-6751-3p	0	1	0
chr1:39387807\|39387986	hsa-miR-6744-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-6783-3p	1	0	0
chr1:39387807\|39387986	hsa-miR-1912-3p	0	1	0
chr1:39387807\|39387986	hsa-miR-125b-5p	0	1	0
chr1:39387807\|39387986	hsa-miR-561-5p	0	1	0
chr1:39387807\|39387986	hsa-miR-424-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:39387807\|39387986
ORF Type	ORF1
Protein Length	58
Nucleotide Length	174
Protein Sequence	MDAVTEELQAKTGSLEEMTQRLREFQESFKNIEKKVEGAKHQLEIFDALGSQACSNKN
Nucleotide Sequence	ATGGATGCTGTTACAGAAGAGCTGCAGGCCAAAACAGGGTCACTCGAAGAAATGACTCAGAGGCTCAGGGAGTTCCAGGAAAGCTTTAAGAATATTGAAAAGAAGGTTGAAGGAGCCAAACACCAACTTGAGATCTTTGATGCTCTGGGTTCTCAAGCCTGTAGCAACAAGAAC

CircID	chr1:39387807\|39387986
ORF Type	ORF2
Protein Length	26
Nucleotide Length	78
Protein Sequence	MKRRLKEPNTNLRSLMLWVLKPVATR
Nucleotide Sequence	TTGAAAAGAAGGTTGAAGGAGCCAAACACCAACTTGAGATCTTTGATGCTCTGGGTTCTCAAGCCTGTAGCAACAAGA

CircID	chr1:39387807\|39387986
ORF Type	ORF3
Protein Length	38
Nucleotide Length	117
Protein Sequence	MRTQSIKDLKLVFGSFNLLFNILKAFLELPEPLSHFFE
Nucleotide Sequence	TTGAGAACCCAGAGCATCAAAGATCTCAAGTTGGTGTTTGGCTCCTTCAACCTTCTTTTCAATATTCTTAAAGCTTTCCTGGAACTCCCTGAGCCTCTGAGTCATTTCTTCGAGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information