CircNet

General Information

circRNA Basic Information

CircID	chr1:39422374\|39430908
Strand	+
CircType	exon
Host Gene	ENSG00000127603.23;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGTTTCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGCAGGTGAATGGACTTGGCCAGGGATTAATTCAGAGTGCAGGAAAAGACTGTGATGTACAGGGTTTAGAACATGACATGGAAGAGATCAATGCTCGATGGAATACATTGAATAAAAAGGTCGCACAAAGAATTGCACAGCTACAGGAAGCTTTGTTGCATTGTGGGAAGTTTCAAGATGCCTTGGAGCCATTGCTCAGCTGGTTGGCAGATACCGAGGAGCTCATAGCCAATCAGAAACCTCCATCTGCTGAGTATAAAGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTCCAGCGGCTCCTAGATGATCGAAAGGCCACAGTAGACATGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAGCAGAGCTGGCTGATAGAGAGAAAATCACTGGACAGCTGGAGAGTCTTGAAAGTAGATGGACTGAACTACTCAGTAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGACATCCTGGTTCTGGCCAAACAGTTCCATGAGACAGCTGAGCCTATTTCTGACTTCTTATCTGTCACAGAGAAAAAGCTTGCTAACTCAGAACCTGTTGGCACTCAGACTGCCAAAATACAGCAGCAGATCATTCGGCACAAGGCTCTGGAAGAAGACATAGAAAACCATGCAACAGATGTGCACCAGGCAGTCAAAATTGGGCAGTCCCTCTCCTCCCTGACATCTCCTGCAGAACAGGGTGTGCTGTCAGAAAAGATAGACTCATTGCAGGCCCGATACAGTGAAATTCAAGACCGCTGTTGTCGGAAGGCAGCCCTACTTGACCAAGCTCTGTCTAATGCTAGGCTGTTTGGGGAGGATGAGGTGGAGGTGCTCAACTGGCTGGCTGAGGTTGAGGACAAGCTCAGTTCAGTGTTCGTAAAGGATTTCAAACAGGATGTCCTGCACAGGCAGCATGCTGACCACCTGGCTTTAAATGAAGAAATTGTTAATAGAAAGAAGAATGTAGATCAAGCTATTAAAAATGGTCAGGCTCTTCTAAAACAAACCACAGGTGAGGAGGTGTTACTTATCCAGGAAAAACTAGATGGTATAAAGACTCGTTACGCAGACATCACAGTTACTAGCTCCAAGGCCCTCAGAACTTTAGAGCAAGCCCGGCAGCTGGCCACCAAGTTCCAGTCTACTTATGAGGAACTGACCGGGTGGCTGAGGGAGGTGGAGGAGGAGCTGGCAACCAGTGGAGGACAGTCTCCCACAGGGGAACAGATACCCCAGTTTCAGCAGAGACAGAAGGAATTAAAGAAGGAGGTCATGGAGCACAGGCTGGTGTTGGACACAGTGAATGAGGTGAGCCGTGCTCTCTTAGAGCTGGTGCCCTGGAGAGCCAGAGAAGGGCTGGATAAACTTGTGTCCGATGCTAACGAGCAGTACAAACTAGTCAGTGACACTATTGGACAAAGGGTGGATGAAATTGATGCTGCTATTCAGAGATCACAACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr1:39422374\|39430908	hsa-miR-26b-3p	1	1
chr1:39422374\|39430908	hsa-miR-197-3p	1	1
chr1:39422374\|39430908	hsa-miR-181a-3p	1	1
chr1:39422374\|39430908	hsa-miR-149-5p	1	1
chr1:39422374\|39430908	hsa-miR-24-3p	1	1
chr1:39422374\|39430908	hsa-miR-148a-5p	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:39422374\|39430908	MSI2	0	0	2
chr1:39422374\|39430908	U2AF2	7	3	13
chr1:39422374\|39430908	MOV10	0	1	6
chr1:39422374\|39430908	ELAVL1	1	0	10
chr1:39422374\|39430908	NUMA1	0	0	2
chr1:39422374\|39430908	SF3B4	0	0	2
chr1:39422374\|39430908	FAM120A	0	0	9
chr1:39422374\|39430908	RBM5	1	0	0
chr1:39422374\|39430908	FKBP4	0	0	1
chr1:39422374\|39430908	CNBP	0	0	2
chr1:39422374\|39430908	YTHDF1	0	11	0
chr1:39422374\|39430908	DDX42	0	0	2
chr1:39422374\|39430908	TAF15	0	1	2
chr1:39422374\|39430908	FMR1	0	3	52
chr1:39422374\|39430908	CPSF6	0	0	3
chr1:39422374\|39430908	FUS	0	0	1
chr1:39422374\|39430908	DGCR8	0	1	7
chr1:39422374\|39430908	SRSF7	0	0	2
chr1:39422374\|39430908	SRSF1	1	0	37
chr1:39422374\|39430908	NOP58	0	1	12
chr1:39422374\|39430908	SRSF3	1	0	0
chr1:39422374\|39430908	U2AF1	0	0	9
chr1:39422374\|39430908	ADAR	0	0	2
chr1:39422374\|39430908	NOP56	0	0	2
chr1:39422374\|39430908	SRSF9	0	0	10
chr1:39422374\|39430908	DDX54	0	0	40
chr1:39422374\|39430908	LSM11	0	1	2
chr1:39422374\|39430908	YTHDF2	0	3	0
chr1:39422374\|39430908	TNRC6A	0	0	2
chr1:39422374\|39430908	FTO	1	0	0
chr1:39422374\|39430908	RBM15	0	2	0
chr1:39422374\|39430908	SF3A3	0	0	1
chr1:39422374\|39430908	PTBP1	0	1	2
chr1:39422374\|39430908	HNRNPC	1	0	0
chr1:39422374\|39430908	TRA2A	0	0	15
chr1:39422374\|39430908	ZNF184	0	1	7
chr1:39422374\|39430908	ACIN1	0	0	6
chr1:39422374\|39430908	DDX3X	0	10	1
chr1:39422374\|39430908	SMNDC1	0	2	7
chr1:39422374\|39430908	AUH	0	0	4
chr1:39422374\|39430908	HNRNPA1	2	1	7
chr1:39422374\|39430908	LIN28B	0	3	14
chr1:39422374\|39430908	LIN28A	0	0	5
chr1:39422374\|39430908	RANGAP1	0	0	10
chr1:39422374\|39430908	FXR1	0	1	12
chr1:39422374\|39430908	FXR2	0	0	15
chr1:39422374\|39430908	SND1	0	0	12
chr1:39422374\|39430908	IGF2BP1	0	0	12
chr1:39422374\|39430908	BUD13	0	2	9
chr1:39422374\|39430908	IGF2BP3	0	0	14
chr1:39422374\|39430908	IGF2BP2	2	1	27
chr1:39422374\|39430908	NPM1	0	1	0
chr1:39422374\|39430908	HNRNPUL1	0	0	2
chr1:39422374\|39430908	TARDBP	2	0	0
chr1:39422374\|39430908	YTHDC1	0	1	0
chr1:39422374\|39430908	GTF2F1	0	0	2
chr1:39422374\|39430908	RBFOX2	1	0	3
chr1:39422374\|39430908	PRPF8	0	0	1
chr1:39422374\|39430908	SLTM	0	0	3
chr1:39422374\|39430908	EIF4G2	0	0	5
chr1:39422374\|39430908	RBM47	0	1	9
chr1:39422374\|39430908	CSTF2T	0	0	8
chr1:39422374\|39430908	TIA1	0	0	1
chr1:39422374\|39430908	RBM22	0	2	1
chr1:39422374\|39430908	TIAL1	0	1	0
chr1:39422374\|39430908	YWHAG	0	0	3
chr1:39422374\|39430908	FBL	0	0	7
chr1:39422374\|39430908	ATXN2	0	1	0
chr1:39422374\|39430908	EIF4A3	1	3	18
chr1:39422374\|39430908	AGO2	0	0	3

CircRNA Information