CircNet

General Information

circRNA Basic Information

CircID	chr1:39439400\|39439485
Strand	+
CircType	exon
Host Gene	ENSG00000127603.22;
Algorism	CIRI2;
Sequence	CTGTTGTTTGATGATGGAAGGATCAATGCCTGGGCTTTCCAAGTCATGGACAATATCCTGGGTGTCTTTGATGGTGGTCAGGAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr1:39439400\|39439485	hsa-miR-640	0	1
chr1:39439400\|39439485	hsa-miR-890	1	1
chr1:39439400\|39439485	hsa-miR-1256	1	1
chr1:39439400\|39439485	hsa-miR-641	1	0
chr1:39439400\|39439485	hsa-miR-3978	1	0
chr1:39439400\|39439485	hsa-miR-6840-3p	1	0
chr1:39439400\|39439485	hsa-miR-3124-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:39439400\|39439485
ORF Type	ORF1
Protein Length	28
Nucleotide Length	84
Protein Sequence	LLFDDGRINAWAFQVMDNILGVFDGGQE
Nucleotide Sequence	CTGTTGTTTGATGATGGAAGGATCAATGCCTGGGCTTTCCAAGTCATGGACAATATCCTGGGTGTCTTTGATGGTGGTCAGGAG

CircID	chr1:39439400\|39439485
ORF Type	ORF2
Protein Length	26
Nucleotide Length	78
Protein Sequence	MMMEGSMPGLSKSWTISWVSLMVVRR
Nucleotide Sequence	TTGATGATGGAAGGATCAATGCCTGGGCTTTCCAAGTCATGGACAATATCCTGGGTGTCTTTGATGGTGGTCAGGAGA

CircID	chr1:39439400\|39439485
ORF Type	ORF3
Protein Length	27
Nucleotide Length	81
Protein Sequence	MTTIKDTQDIVHDLESPGIDPSIIKQQ
Nucleotide Sequence	CTGACCACCATCAAAGACACCCAGGATATTGTCCATGACTTGGAAAGCCCAGGCATTGATCCTTCCATCATCAAACAACAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information