CircNet

General Information

circRNA Basic Information

CircID	chr1:39485540\|39485713
Strand	-
CircType	exon
Host Gene	ENSG00000127603.22;
Algorism	CIRI2;
Sequence	CCTAAAAAGTCTGCCAGTCGCCCTGGGAGTCGGGCTGGGAGTCGAGCCGGGAGTCGAGCCAGCAGCCGGCGAGGAAGTGACGCTTCTGACTTTGACCTCTTAGAGACGCAGTCTGCTTGTTCCGACACTTCAGAAAGCAGCGCTGCAGGGGGCCAAGGCAACTCCAGGAGAGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:39485540\|39485713	hsa-miR-149-5p	0	0	1
chr1:39485540\|39485713	hsa-miR-149-3p	0	0	1
chr1:39485540\|39485713	hsa-miR-328-5p	0	0	1
chr1:39485540\|39485713	hsa-miR-328-3p	0	0	1
chr1:39485540\|39485713	hsa-miR-520g-5p	0	0	1
chr1:39485540\|39485713	hsa-miR-520g-3p	0	0	1
chr1:39485540\|39485713	hsa-miR-520h	0	0	1
chr1:39485540\|39485713	hsa-miR-573	0	0	1
chr1:39485540\|39485713	hsa-miR-1238-5p	0	0	1
chr1:39485540\|39485713	hsa-miR-1238-3p	0	0	1
chr1:39485540\|39485713	hsa-miR-1184	0	0	1
chr1:39485540\|39485713	hsa-miR-133b	0	1	0
chr1:39485540\|39485713	hsa-miR-3183	0	1	0
chr1:39485540\|39485713	hsa-miR-3615	1	1	0
chr1:39485540\|39485713	hsa-miR-4449	1	0	0
chr1:39485540\|39485713	hsa-miR-4494	0	1	0
chr1:39485540\|39485713	hsa-miR-3972	1	0	0
chr1:39485540\|39485713	hsa-miR-12119	1	0	0
chr1:39485540\|39485713	hsa-miR-668-3p	1	0	0
chr1:39485540\|39485713	hsa-miR-212-5p	0	1	0
chr1:39485540\|39485713	hsa-miR-6875-3p	1	0	0
chr1:39485540\|39485713	hsa-miR-6762-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-1915-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-6798-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-6765-3p	1	0	0
chr1:39485540\|39485713	hsa-miR-5580-5p	0	1	0
chr1:39485540\|39485713	hsa-miR-7113-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-3677-3p	1	0	0
chr1:39485540\|39485713	hsa-miR-345-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-3940-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-6800-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-133a-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-4423-5p	0	1	0
chr1:39485540\|39485713	hsa-miR-1915-3p	1	1	0
chr1:39485540\|39485713	hsa-miR-4649-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-4685-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-6729-5p	1	0	0
chr1:39485540\|39485713	hsa-miR-10401-3p	1	0	0
chr1:39485540\|39485713	hsa-miR-6810-3p	0	1	0
chr1:39485540\|39485713	hsa-miR-6764-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:39485540\|39485713
ORF Type	ORF1
Protein Length	30
Nucleotide Length	93
Protein Sequence	MPVALGVGLGVEPGVEPAAGEEVTLLTLTS
Nucleotide Sequence	CTGCCAGTCGCCCTGGGAGTCGGGCTGGGAGTCGAGCCGGGAGTCGAGCCAGCAGCCGGCGAGGAAGTGACGCTTCTGACTTTGACCTCTTAG

CircID	chr1:39485540\|39485713
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MELPWPPAALLSEVSEQADCVSKRSKSEASLPRRLLARLPARLPARLPGRLADFL
Nucleotide Sequence	CTGGAGTTGCCTTGGCCCCCTGCAGCGCTGCTTTCTGAAGTGTCGGAACAAGCAGACTGCGTCTCTAAGAGGTCAAAGTCAGAAGCGTCACTTCCTCGCCGGCTGCTGGCTCGACTCCCGGCTCGACTCCCAGCCCGACTCCCAGGGCGACTGGCAGACTTTTTA

CircID	chr1:39485540\|39485713
ORF Type	ORF3
Protein Length	48
Nucleotide Length	147
Protein Sequence	MQRCFLKCRNKQTASLRGQSQKRHFLAGCWLDSRLDSQPDSQGDWQTF
Nucleotide Sequence	CTGCAGCGCTGCTTTCTGAAGTGTCGGAACAAGCAGACTGCGTCTCTAAGAGGTCAAAGTCAGAAGCGTCACTTCCTCGCCGGCTGCTGGCTCGACTCCCGGCTCGACTCCCAGCCCGACTCCCAGGGCGACTGGCAGACTTTTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information