CircNet

General Information

circRNA Basic Information

CircID	chr1:39525714\|39525912
Strand	-
CircType	exon
Host Gene	ENSG00000183682.7;
Algorism	CIRI2;
Sequence	CTCTGTGCTCTACTATGACAGCAGCAACAACGTCATCCTGCGCAAGCACCGCAACATGGTGGTCAAGGCCTGCGGCTGCCACTGAGTCAGCCCGCCCAGCCCTACTGCAGCCACCCTTCTCATCTGGATCGGGCCCTGCAGAGGCAGAAAACCCTTAAATGCTGTCACAGCTCAAGCAGGAGTGTCAGGGGCCCTCACT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:39525714\|39525912	hsa-miR-370-5p	0	0	1
chr1:39525714\|39525912	hsa-miR-370-3p	0	0	1
chr1:39525714\|39525912	hsa-miR-345-5p	0	0	1
chr1:39525714\|39525912	hsa-miR-345-3p	0	0	1
chr1:39525714\|39525912	hsa-miR-558	-4	0	1
chr1:39525714\|39525912	hsa-miR-604	-7	0	1
chr1:39525714\|39525912	hsa-miR-626	-4	0	1
chr1:39525714\|39525912	hsa-miR-636	-8	0	1
chr1:39525714\|39525912	hsa-miR-647	-3	0	1
chr1:39525714\|39525912	hsa-miR-411-5p	0	0	1
chr1:39525714\|39525912	hsa-miR-411-3p	0	0	1
chr1:39525714\|39525912	hsa-miR-1205	-10	1	1
chr1:39525714\|39525912	hsa-miR-1250-5p	0	0	1
chr1:39525714\|39525912	hsa-miR-1250-3p	0	0	1
chr1:39525714\|39525912	hsa-miR-1253	-6	0	1
chr1:39525714\|39525912	hsa-miR-296-5p	-18	0	1
chr1:39525714\|39525912	hsa-miR-885-3p	-8	0	1
chr1:39525714\|39525912	hsa-miR-1184	-8	0	1
chr1:39525714\|39525912	hsa-miR-483-3p	-4	0	1
chr1:39525714\|39525912	hsa-miR-542-3p	-6	0	1
chr1:39525714\|39525912	hsa-miR-1300	0	0	1
chr1:39525714\|39525912	hsa-miR-544	0	0	1
chr1:39525714\|39525912	hsa-miR-762	-23	1	0
chr1:39525714\|39525912	hsa-miR-3154	-13	1	0
chr1:39525714\|39525912	hsa-miR-3918	-10	1	0
chr1:39525714\|39525912	hsa-miR-4486	-18	1	0
chr1:39525714\|39525912	hsa-miR-4492	-18	1	0
chr1:39525714\|39525912	hsa-miR-4498	-16	1	0
chr1:39525714\|39525912	hsa-miR-4505	-13	1	0
chr1:39525714\|39525912	hsa-miR-1587	-25	1	0
chr1:39525714\|39525912	hsa-miR-4656	-19	1	0
chr1:39525714\|39525912	hsa-miR-1226-5p	-20	1	0
chr1:39525714\|39525912	hsa-miR-5001-3p	-12	1	0
chr1:39525714\|39525912	hsa-miR-296-3p	-23	1	0
chr1:39525714\|39525912	hsa-miR-4732-5p	0	1	0
chr1:39525714\|39525912	hsa-miR-4743-3p	-7	1	0
chr1:39525714\|39525912	hsa-miR-4446-3p	-16	1	0
chr1:39525714\|39525912	hsa-miR-7160-3p	-16	1	0
chr1:39525714\|39525912	hsa-miR-6730-3p	-8	1	0
chr1:39525714\|39525912	hsa-miR-4732-3p	-11	1	0
chr1:39525714\|39525912	hsa-miR-4746-3p	-19	1	0
chr1:39525714\|39525912	hsa-miR-2277-5p	-19	1	0
chr1:39525714\|39525912	hsa-miR-4650-5p	-7	1	0
chr1:39525714\|39525912	hsa-miR-514a-3p	-12	1	0
chr1:39525714\|39525912	hsa-miR-5001-5p	-25	1	0
chr1:39525714\|39525912	hsa-miR-3620-5p	-30	1	0
chr1:39525714\|39525912	hsa-miR-6836-5p	-20	1	0
chr1:39525714\|39525912	hsa-miR-6858-5p	-22	1	0
chr1:39525714\|39525912	hsa-miR-10394-5p	-11	1	0
chr1:39525714\|39525912	hsa-miR-10397-5p	-10	1	0
chr1:39525714\|39525912	hsa-miR-1245b-5p	-7	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:39525714\|39525912
ORF Type	ORF1
Protein Length	43
Nucleotide Length	129
Protein Sequence	MRLPLSQPAQPYCSHPSHLDRALQRQKTLKCCHSSSRSVRGPH
Nucleotide Sequence	CTGCGGCTGCCACTGAGTCAGCCCGCCCAGCCCTACTGCAGCCACCCTTCTCATCTGGATCGGGCCCTGCAGAGGCAGAAAACCCTTAAATGCTGTCACAGCTCAAGCAGGAGTGTCAGGGGCCCTCAC

CircID	chr1:39525714\|39525912
ORF Type	ORF2
Protein Length	51
Nucleotide Length	156
Protein Sequence	LCSTMTAATTSSCASTATWWSRPAAATESARPALLQPPFSSGSGPAEAENP
Nucleotide Sequence	CTGTGCTCTACTATGACAGCAGCAACAACGTCATCCTGCGCAAGCACCGCAACATGGTGGTCAAGGCCTGCGGCTGCCACTGAGTCAGCCCGCCCAGCCCTACTGCAGCCACCCTTCTCATCTGGATCGGGCCCTGCAGAGGCAGAAAACCCTTAA

CircID	chr1:39525714\|39525912
ORF Type	ORF3
Protein Length	44
Nucleotide Length	135
Protein Sequence	MPLQGPIQMRRVAAVGLGGLTQWQPQALTTMLRCLRRMTLLLLS
Nucleotide Sequence	CTGCCTCTGCAGGGCCCGATCCAGATGAGAAGGGTGGCTGCAGTAGGGCTGGGCGGGCTGACTCAGTGGCAGCCGCAGGCCTTGACCACCATGTTGCGGTGCTTGCGCAGGATGACGTTGTTGCTGCTGTCATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information