CircNet

General Information

circRNA Basic Information

CircID	chr1:40048178\|40048336
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCACCCACCATCACGCCTGGCTAATTTTTTTATTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCTTCTCAGCCTCCCAAAGCGCTGGGATTACAGGCATGAGCCATTGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:40048178\|40048336	hsa-miR-575	0	0	1
chr1:40048178\|40048336	hsa-miR-541-5p	0	0	1
chr1:40048178\|40048336	hsa-miR-541-3p	0	0	1
chr1:40048178\|40048336	hsa-miR-1293	0	0	1
chr1:40048178\|40048336	hsa-miR-1253	0	0	1
chr1:40048178\|40048336	hsa-miR-485-5p	0	0	1
chr1:40048178\|40048336	hsa-miR-654-5p	0	0	1
chr1:40048178\|40048336	hsa-miR-548c-3p	0	0	1
chr1:40048178\|40048336	hsa-miR-1300	0	0	1
chr1:40048178\|40048336	hsa-miR-24	0	0	1
chr1:40048178\|40048336	hsa-miR-1268a	0	1	0
chr1:40048178\|40048336	hsa-miR-544b	0	1	0
chr1:40048178\|40048336	hsa-miR-3929	0	1	0
chr1:40048178\|40048336	hsa-miR-1268b	0	1	0
chr1:40048178\|40048336	hsa-miR-4656	1	0	0
chr1:40048178\|40048336	hsa-miR-4736	1	1	0
chr1:40048178\|40048336	hsa-miR-6086	1	1	0
chr1:40048178\|40048336	hsa-miR-143-5p	0	1	0
chr1:40048178\|40048336	hsa-miR-4433a-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-4786-5p	0	1	0
chr1:40048178\|40048336	hsa-miR-4755-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-6820-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6721-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-197-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6849-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-6770-5p	0	1	0
chr1:40048178\|40048336	hsa-miR-6784-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-4640-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6514-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-937-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-423-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-4707-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6847-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-1233-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6769b-5p	0	1	0
chr1:40048178\|40048336	hsa-miR-6778-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6743-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6879-5p	1	1	0
chr1:40048178\|40048336	hsa-miR-4728-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-328-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-4685-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-6846-5p	1	1	0
chr1:40048178\|40048336	hsa-miR-6848-5p	1	1	0
chr1:40048178\|40048336	hsa-miR-939-5p	1	0	0
chr1:40048178\|40048336	hsa-miR-7843-5p	1	1	0
chr1:40048178\|40048336	hsa-miR-6884-5p	0	1	0
chr1:40048178\|40048336	hsa-miR-6827-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-3622b-3p	0	1	0
chr1:40048178\|40048336	hsa-miR-6771-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:40048178\|40048336
ORF Type	ORF1
Protein Length	47
Nucleotide Length	141
Protein Sequence	MANFFIFVFLVETGFCHVGQAGLELLTSGDLPFSASQSAGITGMSHC
Nucleotide Sequence	CTGGCTAATTTTTTTATTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCTTCTCAGCCTCCCAAAGCGCTGGGATTACAGGCATGAGCCATTGC

CircID	chr1:40048178\|40048336
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MPVIPALWEAEKGRSPEVRSSRPAWPTWQNPVSTKNTKIKKLARRDGGW
Nucleotide Sequence	ATGCCTGTAATCCCAGCGCTTTGGGAGGCTGAGAAGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAATAAAAAAATTAGCCAGGCGTGATGGTGGGTGG

CircID	chr1:40048178\|40048336
ORF Type	ORF3
Protein Length	29
Nucleotide Length	90
Protein Sequence	MRRADHLRSGVRDQPGQHGKTPSLLKIQK
Nucleotide Sequence	CTGAGAAGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information