CircRNA Information

General Information
circRNA Basic Information
CircID chr1:40070168|40070512
Strand +
CircType exon
Host Gene ENSG00000131236.15;
Algorism CIRI2;
Sequence CTGAACTTTGACATCCTTACTGTTGATTATCTCCACAATGCCCACCACGTCATCGAATACCAGGCCAAGTTTCTTACAGTTATCTAGGAGAAGAAAGGGAGTGTGTCAACGTGTAACTTTAAAGGAAAGTAATATACATTTAGGAATCTTTAAGGATAGGGTAGGTAAAATGGTATTAGCCTTCTCGGGCTCTGGGACGGGGCTTGCGTGGGACAGCGACAAAGACTCACCTACTGTAATGGAGTTAATTTTGCCCTTGATTTGCAATGTCGTGTTGACACACTTGTATATGTAAGCCACCTGTTTCAGCTCTGTGTCCTCAATCACCAGGTTGGAAACATTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:40070168|40070512 hsa-miR-204-5p 0 0 1
chr1:40070168|40070512 hsa-miR-204-3p 0 0 1
chr1:40070168|40070512 hsa-miR-211-5p 0 0 1
chr1:40070168|40070512 hsa-miR-211-3p 0 0 1
chr1:40070168|40070512 hsa-miR-144-5p 0 0 1
chr1:40070168|40070512 hsa-miR-144-3p 0 0 1
chr1:40070168|40070512 hsa-miR-136-5p 0 0 1
chr1:40070168|40070512 hsa-miR-136-3p 0 0 1
chr1:40070168|40070512 hsa-miR-381-5p 0 0 1
chr1:40070168|40070512 hsa-miR-381-3p 0 0 1
chr1:40070168|40070512 hsa-miR-494-5p 0 0 1
chr1:40070168|40070512 hsa-miR-494-3p 0 0 1
chr1:40070168|40070512 hsa-miR-520g-5p 0 0 1
chr1:40070168|40070512 hsa-miR-520g-3p 0 0 1
chr1:40070168|40070512 hsa-miR-520h 0 0 1
chr1:40070168|40070512 hsa-miR-527 0 0 1
chr1:40070168|40070512 hsa-miR-505-5p 0 0 1
chr1:40070168|40070512 hsa-miR-505-3p 0 0 1
chr1:40070168|40070512 hsa-miR-552-5p 0 0 1
chr1:40070168|40070512 hsa-miR-552-3p 0 0 1
chr1:40070168|40070512 hsa-miR-561-5p 0 0 1
chr1:40070168|40070512 hsa-miR-561-3p 0 0 1
chr1:40070168|40070512 hsa-miR-577 0 0 1
chr1:40070168|40070512 hsa-miR-592 0 1 1
chr1:40070168|40070512 hsa-miR-595 0 0 1
chr1:40070168|40070512 hsa-miR-597-5p 0 0 1
chr1:40070168|40070512 hsa-miR-597-3p 0 0 1
chr1:40070168|40070512 hsa-miR-603 0 0 1
chr1:40070168|40070512 hsa-miR-620 0 0 1
chr1:40070168|40070512 hsa-miR-627-5p 0 0 1
chr1:40070168|40070512 hsa-miR-627-3p 0 0 1
chr1:40070168|40070512 hsa-miR-662 0 0 1
chr1:40070168|40070512 hsa-miR-656-5p 0 0 1
chr1:40070168|40070512 hsa-miR-656-3p 0 0 1
chr1:40070168|40070512 hsa-miR-421 0 0 1
chr1:40070168|40070512 hsa-miR-300 0 0 1
chr1:40070168|40070512 hsa-miR-541-5p 0 0 1
chr1:40070168|40070512 hsa-miR-541-3p 0 0 1
chr1:40070168|40070512 hsa-miR-924 0 1 1
chr1:40070168|40070512 hsa-miR-942-5p 0 0 1
chr1:40070168|40070512 hsa-miR-942-3p 0 0 1
chr1:40070168|40070512 hsa-miR-1247-5p 0 0 1
chr1:40070168|40070512 hsa-miR-1247-3p 0 0 1
chr1:40070168|40070512 hsa-miR-1256 0 0 1
chr1:40070168|40070512 hsa-miR-1265 0 0 1
chr1:40070168|40070512 hsa-miR-1270 0 0 1
chr1:40070168|40070512 hsa-miR-1197 0 0 1
chr1:40070168|40070512 hsa-miR-1224-5p 1 1 1
chr1:40070168|40070512 hsa-miR-490-3p 0 0 1
chr1:40070168|40070512 hsa-miR-654-5p 0 0 1
chr1:40070168|40070512 hsa-miR-501-5p 0 0 1
chr1:40070168|40070512 hsa-miR-582-5p 0 0 1
chr1:40070168|40070512 hsa-miR-885-5p 0 0 1
chr1:40070168|40070512 hsa-miR-362-5p 0 1 1
chr1:40070168|40070512 hsa-miR-518a-5p 0 0 1
chr1:40070168|40070512 hsa-miR-514 0 0 1
chr1:40070168|40070512 hsa-miR-101 0 0 1
chr1:40070168|40070512 hsa-miR-1183 1 0 0
chr1:40070168|40070512 hsa-miR-1268a 1 0 0
chr1:40070168|40070512 hsa-miR-2861 1 0 0
chr1:40070168|40070512 hsa-miR-3147 1 0 0
chr1:40070168|40070512 hsa-miR-3685 1 0 0
chr1:40070168|40070512 hsa-miR-3945 1 0 0
chr1:40070168|40070512 hsa-miR-1268b 1 0 0
chr1:40070168|40070512 hsa-miR-4449 1 1 0
chr1:40070168|40070512 hsa-miR-4462 1 0 0
chr1:40070168|40070512 hsa-miR-4490 1 0 0
chr1:40070168|40070512 hsa-miR-3972 1 0 0
chr1:40070168|40070512 hsa-miR-4656 1 1 0
chr1:40070168|40070512 hsa-miR-4689 1 0 0
chr1:40070168|40070512 hsa-miR-6088 1 0 0
chr1:40070168|40070512 hsa-miR-6863 1 0 0
chr1:40070168|40070512 hsa-miR-8089 1 0 0
chr1:40070168|40070512 hsa-miR-12120 1 0 0
chr1:40070168|40070512 hsa-miR-671-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6821-5p 1 0 0
chr1:40070168|40070512 hsa-miR-1226-5p 1 1 0
chr1:40070168|40070512 hsa-miR-6753-5p 1 0 0
chr1:40070168|40070512 hsa-miR-3160-3p 0 1 0
chr1:40070168|40070512 hsa-miR-6717-5p 1 0 0
chr1:40070168|40070512 hsa-miR-3616-3p 1 0 0
chr1:40070168|40070512 hsa-miR-339-5p 1 1 0
chr1:40070168|40070512 hsa-miR-4433a-5p 0 1 0
chr1:40070168|40070512 hsa-miR-876-3p 0 1 0
chr1:40070168|40070512 hsa-miR-4433b-5p 0 1 0
chr1:40070168|40070512 hsa-miR-6732-3p 1 0 0
chr1:40070168|40070512 hsa-miR-4740-3p 0 1 0
chr1:40070168|40070512 hsa-miR-5580-3p 0 1 0
chr1:40070168|40070512 hsa-miR-6769b-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6737-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6769a-5p 1 1 0
chr1:40070168|40070512 hsa-miR-6819-5p 1 0 0
chr1:40070168|40070512 hsa-miR-7107-5p 1 0 0
chr1:40070168|40070512 hsa-miR-4685-3p 0 1 0
chr1:40070168|40070512 hsa-miR-3620-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6862-5p 1 0 0
chr1:40070168|40070512 hsa-miR-328-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6735-5p 1 0 0
chr1:40070168|40070512 hsa-miR-6858-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:40070168|40070512
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LNFDILTVDYLHNAHHVIEYQAKFLTVI
Nucleotide Sequence CTGAACTTTGACATCCTTACTGTTGATTATCTCCACAATGCCCACCACGTCATCGAATACCAGGCCAAGTTTCTTACAGTTATCTAG

CircID chr1:40070168|40070512
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MQCRVDTLVYVSHLFQLCVLNHQVGNIF
Nucleotide Sequence TTGCAATGTCGTGTTGACACACTTGTATATGTAAGCCACCTGTTTCAGCTCTGTGTCCTCAATCACCAGGTTGGAAACATTTTC

CircID chr1:40070168|40070512
ORF Type ORF3
Protein Length 95
Nucleotide Length 288
Protein Sequence MTSLLLIISTMPTTSSNTRPSFLQLSRRRKGVCQRVTLKESNIHLGIFKDRVGKMVLAFSGSGTGLAWDSDKDSPTVMELILPLICNVVLTHLYM
Nucleotide Sequence TTGACATCCTTACTGTTGATTATCTCCACAATGCCCACCACGTCATCGAATACCAGGCCAAGTTTCTTACAGTTATCTAGGAGAAGAAAGGGAGTGTGTCAACGTGTAACTTTAAAGGAAAGTAATATACATTTAGGAATCTTTAAGGATAGGGTAGGTAAAATGGTATTAGCCTTCTCGGGCTCTGGGACGGGGCTTGCGTGGGACAGCGACAAAGACTCACCTACTGTAATGGAGTTAATTTTGCCCTTGATTTGCAATGTCGTGTTGACACACTTGTATATGTAA

CircID chr1:40070168|40070512
ORF Type ORF4
Protein Length 74
Nucleotide Length 225
Protein Sequence MVIEDTELKQVAYIYKCVNTTLQIKGKINSITVGESLSLSHASPVPEPEKANTILPTLSLKIPKCILLSFKVTR
Nucleotide Sequence CTGGTGATTGAGGACACAGAGCTGAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGGTGAGTCTTTGTCGCTGTCCCACGCAAGCCCCGTCCCAGAGCCCGAGAAGGCTAATACCATTTTACCTACCCTATCCTTAAAGATTCCTAAATGTATATTACTTTCCTTTAAAGTTACACGTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites