CircNet

General Information

circRNA Basic Information

CircID	chr1:40413016\|40417096
Strand	+
CircType	exon
Host Gene	ENSG00000084070.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAAGAAAAAGATGACAAGTGGAAAAGAGGGAGCGAACCAGTTCCAGAAAAAAAATTGGAACCTGTTGTTTTTGAGAAGGTGAAAATGCCACAGAAAAAAGAAGACCCACAGCTACCTCGGAAAAGCTCCCCGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCCTTGCAATGTTCATGGCTCCCGCTCAGATGGCATATCCCACAGCCTACCCCAGCTTCCCCGGGGTTACACCTCCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:40413016\|40417096	hsa-miR-93-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:40413016\|40417096
ORF Type	ORF1
Protein Length	134
Nucleotide Length	402
Protein Sequence	MPQKKEDPQLPRKSSPKSTAPVMDLLGLAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQ
Nucleotide Sequence	ATGCCACAGAAAAAAGAAGACCCACAGCTACCTCGGAAAAGCTCCCCGAAATCCACAGCGCCTGTCATGGATTTGTTGGGCCTTGCAATGTTCATGGCTCCCGCTCAGATGGCATATCCCACAGCCTACCCCAGCTTCCCCGGGGTTACACCTCCTAACAGCATAATGGGGAGCATGATGCCTCCACCAGTAGGCATGGTTGCTCAGCCAGGAGCTTCTGGGATGGTTGCCCCCATGGCCATGCCTGCAGGCTATATGGGTGGCATGCAGGCATCAATGATGGGTGTGCCGAATGGAATGATGACCACCCAGCAGGCTGGCTACATGGCAGGCATGGCAGCTATGCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAATGGAACCTTACTCAG

CircID	chr1:40413016\|40417096
ORF Type	ORF2
Protein Length	59
Nucleotide Length	177
Protein Sequence	MNIARPNKSMTGAVDFGELFRGSCGSSFFCGIFTFSKTTGSNFFSGTGSLPLFHLSSFS
Nucleotide Sequence	ATGAACATTGCAAGGCCCAACAAATCCATGACAGGCGCTGTGGATTTCGGGGAGCTTTTCCGAGGTAGCTGTGGGTCTTCTTTTTTCTGTGGCATTTTCACCTTCTCAAAAACAACAGGTTCCAATTTTTTTTCTGGAACTGGTTCGCTCCCTCTTTTCCACTTGTCATCTTTTTCT

CircID	chr1:40413016\|40417096
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MPACHPYSLQAWPWGQPSQKLLAEQPCLLVEASCSPLCC*
Nucleotide Sequence	ATGCCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATGGGGGCAACCATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTGGTGGAGGCATCATGCTCCCCATTATGCTGTTAG

CircID	chr1:40413016\|40417096
ORF Type	ORF4
Protein Length	82
Nucleotide Length	246
Protein Sequence	CLHATHIACRHGHGGNHPRSSWLSNHAYWWRHHAPHYAVRRCNPGEAGVGCGICHLSGSHEHCKAQQIHDRRCGFRGAFPR*
Nucleotide Sequence	TGCCTGCATGCCACCCATATAGCCTGCAGGCATGGCCATGGGGGCAACCATCCCAGAAGCTCCTGGCTGAGCAACCATGCCTACTGGTGGAGGCATCATGCTCCCCATTATGCTGTTAGGAGGTGTAACCCCGGGGAAGCTGGGGTAGGCTGTGGGATATGCCATCTGAGCGGGAGCCATGAACATTGCAAGGCCCAACAAATCCATGACAGGCGCTGTGGATTTCGGGGAGCTTTTCCGAGGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:40413016\|40417096	SLBP	0	0	1
chr1:40413016\|40417096	FUS	1	1	0
chr1:40413016\|40417096	ELAVL3	0	1	0
chr1:40413016\|40417096	CNBP	1	0	0
chr1:40413016\|40417096	TAF15	0	1	0
chr1:40413016\|40417096	FMR1	0	0	2
chr1:40413016\|40417096	U2AF2	9	5	2
chr1:40413016\|40417096	ELAVL1	5	2	1
chr1:40413016\|40417096	SRSF1	0	0	1
chr1:40413016\|40417096	NOP58	2	2	3
chr1:40413016\|40417096	NOP56	1	1	0
chr1:40413016\|40417096	DDX54	0	2	8
chr1:40413016\|40417096	RBM10	2	1	0
chr1:40413016\|40417096	HNRNPL	0	1	0
chr1:40413016\|40417096	TROVE2	0	0	1
chr1:40413016\|40417096	SF3A3	1	0	0
chr1:40413016\|40417096	PTBP1	0	0	1
chr1:40413016\|40417096	HNRNPD	1	0	0
chr1:40413016\|40417096	TRA2A	0	0	1
chr1:40413016\|40417096	HNRNPA2B1	0	1	0
chr1:40413016\|40417096	LARP4B	0	0	1
chr1:40413016\|40417096	MSI2	0	0	1
chr1:40413016\|40417096	LIN28B	0	0	2
chr1:40413016\|40417096	FXR2	0	0	1
chr1:40413016\|40417096	IGF2BP2	2	3	0
chr1:40413016\|40417096	MBNL2	0	1	0
chr1:40413016\|40417096	BUD13	0	0	1
chr1:40413016\|40417096	RBFOX2	0	1	0
chr1:40413016\|40417096	PRPF8	0	2	0
chr1:40413016\|40417096	SLTM	0	1	0
chr1:40413016\|40417096	CSTF2T	0	0	1
chr1:40413016\|40417096	RBM22	0	2	0
chr1:40413016\|40417096	DKC1	1	0	0
chr1:40413016\|40417096	FBL	2	0	2
chr1:40413016\|40417096	EIF4A3	2	0	2
chr1:40413016\|40417096	AGO2	0	1	1

CircRNA Information