CircNet

General Information

circRNA Basic Information

CircID	chr1:40479239\|40479405
Strand	-
CircType	exon
Host Gene	ENSG00000187815.8;
Algorism	CIRI2;
Sequence	ACACCAGAGTCCTGAGGGCAGGTGATTGGAATCTGAGCAACACCCCACAACTGTGAAGCGTCTCATCAAGAGCTTCTGGCAATTTCCTCACCAGAAGTGGACAAGTCCAGTAAGGCAGGCATCATGCCACAGCAGCTCCTGATCACCCTGCCTACCGAGGCCAGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:40479239\|40479405	hsa-miR-27a-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-27a-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-27b-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-27b-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-383-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-383-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-422a	0	0	1
chr1:40479239\|40479405	hsa-miR-558	0	1	1
chr1:40479239\|40479405	hsa-miR-608	1	0	1
chr1:40479239\|40479405	hsa-miR-609	0	0	1
chr1:40479239\|40479405	hsa-miR-708-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-708-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-940	0	0	1
chr1:40479239\|40479405	hsa-miR-1178-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-1178-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-1202	0	0	1
chr1:40479239\|40479405	hsa-miR-1243	0	0	1
chr1:40479239\|40479405	hsa-miR-1322	0	0	1
chr1:40479239\|40479405	hsa-miR-139-3p	0	0	1
chr1:40479239\|40479405	hsa-miR-491-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-28-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-513a-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-1207-5p	1	1	1
chr1:40479239\|40479405	hsa-miR-342-5p	0	0	1
chr1:40479239\|40479405	hsa-miR-128	0	0	1
chr1:40479239\|40479405	hsa-miR-378	0	0	1
chr1:40479239\|40479405	hsa-miR-612	1	0	0
chr1:40479239\|40479405	hsa-miR-1293	1	1	0
chr1:40479239\|40479405	hsa-miR-378b	0	1	0
chr1:40479239\|40479405	hsa-miR-3139	0	1	0
chr1:40479239\|40479405	hsa-miR-378c	0	1	0
chr1:40479239\|40479405	hsa-miR-378e	0	1	0
chr1:40479239\|40479405	hsa-miR-378f	0	1	0
chr1:40479239\|40479405	hsa-miR-378h	0	1	0
chr1:40479239\|40479405	hsa-miR-5572	1	0	0
chr1:40479239\|40479405	hsa-miR-6860	1	0	0
chr1:40479239\|40479405	hsa-miR-12124	0	1	0
chr1:40479239\|40479405	hsa-miR-18a-3p	0	1	0
chr1:40479239\|40479405	hsa-miR-6747-3p	0	1	0
chr1:40479239\|40479405	hsa-miR-6765-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6861-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6806-5p	0	1	0
chr1:40479239\|40479405	hsa-miR-6742-5p	1	1	0
chr1:40479239\|40479405	hsa-miR-3150b-3p	0	1	0
chr1:40479239\|40479405	hsa-miR-7855-5p	0	1	0
chr1:40479239\|40479405	hsa-miR-4436b-5p	0	1	0
chr1:40479239\|40479405	hsa-miR-3934-3p	0	1	0
chr1:40479239\|40479405	hsa-miR-6771-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6823-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-339-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-4763-3p	1	1	0
chr1:40479239\|40479405	hsa-miR-6787-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6737-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6808-5p	0	1	0
chr1:40479239\|40479405	hsa-miR-10392-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-328-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-6883-5p	1	0	0
chr1:40479239\|40479405	hsa-miR-378a-3p	0	1	0
chr1:40479239\|40479405	hsa-miR-5009-5p	0	1	0
chr1:40479239\|40479405	hsa-miR-378d	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:40479239\|40479405
ORF Type	ORF1
Protein Length	30
Nucleotide Length	90
Protein Sequence	MAISSPEVDKSSKAGIMPQQLLITLPTEAS
Nucleotide Sequence	CTGGCAATTTCCTCACCAGAAGTGGACAAGTCCAGTAAGGCAGGCATCATGCCACAGCAGCTCCTGATCACCCTGCCTACCGAGGCCAGC

CircID	chr1:40479239\|40479405
ORF Type	ORF2
Protein Length	38
Nucleotide Length	117
Protein Sequence	MESEQHPTTVKRLIKSFWQFPHQKWTSPVRQASCHSSS
Nucleotide Sequence	TTGGAATCTGAGCAACACCCCACAACTGTGAAGCGTCTCATCAAGAGCTTCTGGCAATTTCCTCACCAGAAGTGGACAAGTCCAGTAAGGCAGGCATCATGCCACAGCAGCTCCTGA

CircID	chr1:40479239\|40479405
ORF Type	ORF3
Protein Length	32
Nucleotide Length	99
Protein Sequence	MASVGRVIRSCCGMMPALLDLSTSGEEIARSS
Nucleotide Sequence	CTGGCCTCGGTAGGCAGGGTGATCAGGAGCTGCTGTGGCATGATGCCTGCCTTACTGGACTTGTCCACTTCTGGTGAGGAAATTGCCAGAAGCTCTTGA

CircID	chr1:40479239\|40479405
ORF Type	ORF4
Protein Length	39
Nucleotide Length	117
Protein Sequence	MPYWTCPLLVRKLPEALDETLHSCGVLLRFQSPALRTLV
Nucleotide Sequence	CTGCCTTACTGGACTTGTCCACTTCTGGTGAGGAAATTGCCAGAAGCTCTTGATGAGACGCTTCACAGTTGTGGGGTGTTGCTCAGATTCCAATCACCTGCCCTCAGGACTCTGGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information