CircRNA Information

General Information
circRNA Basic Information
CircID chr1:42930773|42931135
Strand +
CircType exon
Host Gene ENSG00000117394.18;
Algorism CIRI2;
Sequence CACGCTCTGGTCCCTCTCAGTGGCCATCTTTTCTGTTGGGGGCATGATTGGCTCCTTCTCTGTGGGCCTTTTCGTTAACCGCTTTGGCCGGTAAGTAGGAGAGGTCCTGGCACTGCCCTTGGAGGGCCCATGCCCTCCTGCCCAGGGAGTCCCAGATGGGGTGGGAGGTAGGGGAGACTTATCTGCCTGTTCCAGGGTATTACCTCTGACCCAGCCCCTCGGAGCCCAAGGAATGTGGGCACTGGCCTGACCTGTGACCCCGTCCCCAGGCGGAATTCAATGCTGATGATGAACCTGCTGGCCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCTGATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:42930773|42931135 hsa-miR-10a-5p 0 0 1
chr1:42930773|42931135 hsa-miR-10a-3p 0 0 1
chr1:42930773|42931135 hsa-miR-10b-5p 0 0 1
chr1:42930773|42931135 hsa-miR-10b-3p 0 0 1
chr1:42930773|42931135 hsa-miR-34a-5p 0 0 1
chr1:42930773|42931135 hsa-miR-34a-3p 0 0 1
chr1:42930773|42931135 hsa-miR-214-5p 0 0 1
chr1:42930773|42931135 hsa-miR-214-3p 0 0 1
chr1:42930773|42931135 hsa-miR-449a 0 0 1
chr1:42930773|42931135 hsa-miR-588 0 1 1
chr1:42930773|42931135 hsa-miR-612 0 1 1
chr1:42930773|42931135 hsa-miR-635 0 1 1
chr1:42930773|42931135 hsa-miR-661 1 0 1
chr1:42930773|42931135 hsa-miR-449b-5p 0 0 1
chr1:42930773|42931135 hsa-miR-449b-3p 0 0 1
chr1:42930773|42931135 hsa-miR-657 0 1 1
chr1:42930773|42931135 hsa-miR-1264 0 0 1
chr1:42930773|42931135 hsa-miR-1825 0 1 1
chr1:42930773|42931135 hsa-miR-296-5p 0 0 1
chr1:42930773|42931135 hsa-miR-532-3p 0 1 1
chr1:42930773|42931135 hsa-miR-423-5p 0 1 1
chr1:42930773|42931135 hsa-miR-1224-3p 0 0 1
chr1:42930773|42931135 hsa-miR-502-5p 0 0 1
chr1:42930773|42931135 hsa-miR-513a-5p 0 0 1
chr1:42930773|42931135 hsa-miR-34c-5p 0 0 1
chr1:42930773|42931135 hsa-miR-371-5p 0 0 1
chr1:42930773|42931135 hsa-miR-1260 0 0 1
chr1:42930773|42931135 hsa-miR-1280 0 0 1
chr1:42930773|42931135 hsa-miR-220c 0 0 1
chr1:42930773|42931135 hsa-miR-1285 0 0 1
chr1:42930773|42931135 hsa-miR-638 1 0 0
chr1:42930773|42931135 hsa-miR-762 1 1 0
chr1:42930773|42931135 hsa-miR-922 0 1 0
chr1:42930773|42931135 hsa-miR-4298 0 1 0
chr1:42930773|42931135 hsa-miR-4253 0 1 0
chr1:42930773|42931135 hsa-miR-4252 0 1 0
chr1:42930773|42931135 hsa-miR-4292 0 1 0
chr1:42930773|42931135 hsa-miR-3665 1 0 0
chr1:42930773|42931135 hsa-miR-4462 1 0 0
chr1:42930773|42931135 hsa-miR-4498 0 1 0
chr1:42930773|42931135 hsa-miR-4519 1 0 0
chr1:42930773|42931135 hsa-miR-1587 1 0 0
chr1:42930773|42931135 hsa-miR-3960 1 0 0
chr1:42930773|42931135 hsa-miR-4647 0 1 0
chr1:42930773|42931135 hsa-miR-4651 1 0 0
chr1:42930773|42931135 hsa-miR-4674 1 1 0
chr1:42930773|42931135 hsa-miR-4688 1 0 0
chr1:42930773|42931135 hsa-miR-4692 0 1 0
chr1:42930773|42931135 hsa-miR-5194 1 0 0
chr1:42930773|42931135 hsa-miR-5705 0 1 0
chr1:42930773|42931135 hsa-miR-5787 1 1 0
chr1:42930773|42931135 hsa-miR-6081 1 0 0
chr1:42930773|42931135 hsa-miR-6085 1 1 0
chr1:42930773|42931135 hsa-miR-6860 0 1 0
chr1:42930773|42931135 hsa-miR-8072 1 0 0
chr1:42930773|42931135 hsa-miR-8083 0 1 0
chr1:42930773|42931135 hsa-miR-8089 1 1 0
chr1:42930773|42931135 hsa-miR-12119 1 0 0
chr1:42930773|42931135 hsa-miR-12122 0 1 0
chr1:42930773|42931135 hsa-miR-6734-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6857-5p 1 1 0
chr1:42930773|42931135 hsa-miR-1972 1 1 0
chr1:42930773|42931135 hsa-miR-6089 1 0 0
chr1:42930773|42931135 hsa-miR-6757-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6873-5p 0 1 0
chr1:42930773|42931135 hsa-miR-4722-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6721-5p 0 1 0
chr1:42930773|42931135 hsa-miR-4761-3p 0 1 0
chr1:42930773|42931135 hsa-miR-3189-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6845-3p 0 1 0
chr1:42930773|42931135 hsa-miR-6793-5p 1 0 0
chr1:42930773|42931135 hsa-miR-23a-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6782-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6810-5p 0 1 0
chr1:42930773|42931135 hsa-miR-345-3p 1 0 0
chr1:42930773|42931135 hsa-miR-6852-5p 0 1 0
chr1:42930773|42931135 hsa-miR-1226-5p 1 0 0
chr1:42930773|42931135 hsa-miR-4786-3p 1 0 0
chr1:42930773|42931135 hsa-miR-4640-5p 1 0 0
chr1:42930773|42931135 hsa-miR-1228-5p 1 0 0
chr1:42930773|42931135 hsa-miR-296-3p 1 0 0
chr1:42930773|42931135 hsa-miR-6771-5p 1 1 0
chr1:42930773|42931135 hsa-miR-92b-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6749-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6821-3p 0 1 0
chr1:42930773|42931135 hsa-miR-6861-3p 0 1 0
chr1:42930773|42931135 hsa-miR-149-3p 0 1 0
chr1:42930773|42931135 hsa-let-7g-5p 0 1 0
chr1:42930773|42931135 hsa-miR-3189-3p 1 1 0
chr1:42930773|42931135 hsa-miR-3922-5p 1 0 0
chr1:42930773|42931135 hsa-miR-3191-3p 0 1 0
chr1:42930773|42931135 hsa-miR-6813-3p 1 0 0
chr1:42930773|42931135 hsa-miR-6801-5p 0 1 0
chr1:42930773|42931135 hsa-miR-4746-3p 1 0 0
chr1:42930773|42931135 hsa-miR-3184-3p 0 1 0
chr1:42930773|42931135 hsa-miR-371b-3p 1 1 0
chr1:42930773|42931135 hsa-miR-1298-3p 0 1 0
chr1:42930773|42931135 hsa-miR-6800-3p 0 1 0
chr1:42930773|42931135 hsa-miR-6505-5p 0 1 0
chr1:42930773|42931135 hsa-miR-6733-3p 0 1 0
chr1:42930773|42931135 hsa-miR-3162-3p 0 1 0
chr1:42930773|42931135 hsa-miR-1207-5p 1 0 0
chr1:42930773|42931135 hsa-miR-4763-3p 1 0 0
chr1:42930773|42931135 hsa-miR-6816-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6865-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6775-5p 1 0 0
chr1:42930773|42931135 hsa-miR-5001-5p 0 1 0
chr1:42930773|42931135 hsa-miR-6743-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6756-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6813-5p 1 1 0
chr1:42930773|42931135 hsa-miR-7107-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6774-5p 1 1 0
chr1:42930773|42931135 hsa-miR-7111-5p 1 0 0
chr1:42930773|42931135 hsa-miR-3620-5p 1 0 0
chr1:42930773|42931135 hsa-miR-5189-5p 1 1 0
chr1:42930773|42931135 hsa-miR-5196-5p 1 0 0
chr1:42930773|42931135 hsa-miR-10392-5p 1 0 0
chr1:42930773|42931135 hsa-miR-1237-5p 1 0 0
chr1:42930773|42931135 hsa-miR-328-5p 1 0 0
chr1:42930773|42931135 hsa-miR-449c-5p 1 0 0
chr1:42930773|42931135 hsa-miR-4632-5p 1 1 0
chr1:42930773|42931135 hsa-miR-4725-3p 1 0 0
chr1:42930773|42931135 hsa-miR-4726-5p 1 0 0
chr1:42930773|42931135 hsa-miR-6735-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6846-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6848-5p 1 0 0
chr1:42930773|42931135 hsa-miR-3187-5p 0 1 0
chr1:42930773|42931135 hsa-miR-4436b-3p 0 1 0
chr1:42930773|42931135 hsa-miR-939-5p 1 0 0
chr1:42930773|42931135 hsa-miR-7843-5p 1 1 0
chr1:42930773|42931135 hsa-miR-4700-5p 0 1 0
chr1:42930773|42931135 hsa-miR-3184-5p 0 1 0
chr1:42930773|42931135 hsa-miR-6724-5p 0 1 0
chr1:42930773|42931135 hsa-miR-6791-5p 1 1 0
chr1:42930773|42931135 hsa-miR-6862-3p 1 0 0
chr1:42930773|42931135 hsa-miR-5009-5p 0 1 0
chr1:42930773|42931135 hsa-miR-10400-3p 1 1 0
chr1:42930773|42931135 hsa-miR-6837-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:42930773|42931135
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MFQGITSDPAPRSPRNVGTGLTCDPVPRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLI
Nucleotide Sequence CTGTTCCAGGGTATTACCTCTGACCCAGCCCCTCGGAGCCCAAGGAATGTGGGCACTGGCCTGACCTGTGACCCCGTCCCCAGGCGGAATTCAATGCTGATGATGAACCTGCTGGCCTTCGTGTCCGCCGTGCTCATGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGATGCTGATC

CircID chr1:42930773|42931135
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MALPLEGPCPPAQGVPDGVGGRGDLSACSRVLPLTQPLGAQGMWALA
Nucleotide Sequence CTGGCACTGCCCTTGGAGGGCCCATGCCCTCCTGCCCAGGGAGTCCCAGATGGGGTGGGAGGTAGGGGAGACTTATCTGCCTGTTCCAGGGTATTACCTCTGACCCAGCCCCTCGGAGCCCAAGGAATGTGGGCACTGGCCTGA

CircID chr1:42930773|42931135
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MEQADKSPLPPTPSGTPWAGGHGPSKGSARTSPTYRPKRLTKRPTEKEPIMPPTEKMATERDQSV
Nucleotide Sequence CTGGAACAGGCAGATAAGTCTCCCCTACCTCCCACCCCATCTGGGACTCCCTGGGCAGGAGGGCATGGGCCCTCCAAGGGCAGTGCCAGGACCTCTCCTACTTACCGGCCAAAGCGGTTAACGAAAAGGCCCACAGAGAAGGAGCCAATCATGCCCCCAACAGAAAAGATGGCCACTGAGAGGGACCAGAGCGTG

CircID chr1:42930773|42931135
ORF Type ORF4
Protein Length 89
Nucleotide Length 270
Protein Sequence MPSFEKPMSTADTKASRFIISIEFRLGTGSQVRPVPTFLGLRGAGSEVIPWNRQISLPYLPPHLGLPGQEGMGPPRAVPGPLLLTGQSG
Nucleotide Sequence TTGCCCAGTTTCGAGAAGCCCATGAGCACGGCGGACACGAAGGCCAGCAGGTTCATCATCAGCATTGAATTCCGCCTGGGGACGGGGTCACAGGTCAGGCCAGTGCCCACATTCCTTGGGCTCCGAGGGGCTGGGTCAGAGGTAATACCCTGGAACAGGCAGATAAGTCTCCCCTACCTCCCACCCCATCTGGGACTCCCTGGGCAGGAGGGCATGGGCCCTCCAAGGGCAGTGCCAGGACCTCTCCTACTTACCGGCCAAAGCGGTTAA

CircID chr1:42930773|42931135
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MNSAWGRGHRSGQCPHSLGSEGLGQR
Nucleotide Sequence TTGAATTCCGCCTGGGGACGGGGTCACAGGTCAGGCCAGTGCCCACATTCCTTGGGCTCCGAGGGGCTGGGTCAGAGGTAA

CircID chr1:42930773|42931135
ORF Type ORF6
Protein Length 42
Nucleotide Length 129
Protein Sequence MGRRAWALQGQCQDLSYLPAKAVNEKAHREGANHAPNRKDGH
Nucleotide Sequence CTGGGCAGGAGGGCATGGGCCCTCCAAGGGCAGTGCCAGGACCTCTCCTACTTACCGGCCAAAGCGGTTAACGAAAAGGCCCACAGAGAAGGAGCCAATCATGCCCCCAACAGAAAAGATGGCCACTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites