CircRNA Information

General Information
circRNA Basic Information
CircID chr1:43309070|43309435
Strand +
CircType exon
Host Gene ENSG00000066056.12;
Algorism CIRI2;
Sequence CTCGAACTCAGCTGTGGTCTTCTCTGGCTCCACAATGGCCTTGGTGGACTAAAAGAGATGGGGGAAGGGGACAGGTCACAGGGAACGGGCACCTCTGTGGCAGGCACCCAGGTGTCCGTCTGGACTGATGGCAGGACAGAGGCCCAGTGGCAGCCCCCTCACCAATCAGCCTGACCTCATGTGAGCAATGGTCAGGCCAATGGGTGGGCCCTGCAGAAAGTTCTGAGGGACTAGGGGGTCTTAGGGATCAGCTGTGAAGCAGGCGGCCTGAGGGGCTGGTGGGTTGGGGTGATTGGGGGCTGACCAGGAGCACAGTGCCGTCTGGCTTGCGTAGCTCTATGCTGCCCCGCACGGGGAAGGGGTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:43309070|43309435 hsa-miR-27a-5p 0 0 1
chr1:43309070|43309435 hsa-miR-27a-3p 0 0 1
chr1:43309070|43309435 hsa-miR-107 0 0 1
chr1:43309070|43309435 hsa-miR-198 0 1 1
chr1:43309070|43309435 hsa-miR-27b-5p 0 0 1
chr1:43309070|43309435 hsa-miR-27b-3p 0 0 1
chr1:43309070|43309435 hsa-miR-484 0 0 1
chr1:43309070|43309435 hsa-miR-554 0 0 1
chr1:43309070|43309435 hsa-miR-591 0 0 1
chr1:43309070|43309435 hsa-miR-631 0 0 1
chr1:43309070|43309435 hsa-miR-660-5p 0 0 1
chr1:43309070|43309435 hsa-miR-660-3p 0 0 1
chr1:43309070|43309435 hsa-miR-744-5p 0 0 1
chr1:43309070|43309435 hsa-miR-744-3p 0 0 1
chr1:43309070|43309435 hsa-miR-1178-5p 0 0 1
chr1:43309070|43309435 hsa-miR-1178-3p 0 0 1
chr1:43309070|43309435 hsa-miR-1226-5p 0 0 1
chr1:43309070|43309435 hsa-miR-1226-3p 0 0 1
chr1:43309070|43309435 hsa-miR-1205 0 1 1
chr1:43309070|43309435 hsa-miR-1253 0 1 1
chr1:43309070|43309435 hsa-miR-486-3p 0 0 1
chr1:43309070|43309435 hsa-miR-339-5p 0 0 1
chr1:43309070|43309435 hsa-miR-1184 0 0 1
chr1:43309070|43309435 hsa-miR-423-5p 0 0 1
chr1:43309070|43309435 hsa-miR-361-3p 0 0 1
chr1:43309070|43309435 hsa-miR-509-3p 0 0 1
chr1:43309070|43309435 hsa-miR-513a-5p 0 0 1
chr1:43309070|43309435 hsa-miR-140-3p 0 0 1
chr1:43309070|43309435 hsa-miR-455-3p 0 1 1
chr1:43309070|43309435 hsa-miR-1274a 0 0 1
chr1:43309070|43309435 hsa-miR-550 0 0 1
chr1:43309070|43309435 hsa-miR-103 0 0 1
chr1:43309070|43309435 hsa-miR-1274b 0 0 1
chr1:43309070|43309435 hsa-miR-544 0 0 1
chr1:43309070|43309435 hsa-miR-346 1 0 0
chr1:43309070|43309435 hsa-miR-661 0 1 0
chr1:43309070|43309435 hsa-miR-663a 1 0 0
chr1:43309070|43309435 hsa-miR-1913 1 0 0
chr1:43309070|43309435 hsa-miR-4313 1 0 0
chr1:43309070|43309435 hsa-miR-4329 0 1 0
chr1:43309070|43309435 hsa-miR-3918 0 1 0
chr1:43309070|43309435 hsa-miR-3929 0 1 0
chr1:43309070|43309435 hsa-miR-3943 1 1 0
chr1:43309070|43309435 hsa-miR-4478 0 1 0
chr1:43309070|43309435 hsa-miR-3974 0 1 0
chr1:43309070|43309435 hsa-miR-4688 1 0 0
chr1:43309070|43309435 hsa-miR-4706 1 0 0
chr1:43309070|43309435 hsa-miR-5090 0 1 0
chr1:43309070|43309435 hsa-miR-15a-3p 0 1 0
chr1:43309070|43309435 hsa-miR-4665-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6720-5p 1 0 0
chr1:43309070|43309435 hsa-miR-7851-3p 0 1 0
chr1:43309070|43309435 hsa-miR-1225-3p 1 0 0
chr1:43309070|43309435 hsa-miR-505-5p 0 1 0
chr1:43309070|43309435 hsa-miR-296-5p 1 0 0
chr1:43309070|43309435 hsa-miR-3189-5p 1 0 0
chr1:43309070|43309435 hsa-miR-4711-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6796-5p 1 1 0
chr1:43309070|43309435 hsa-miR-185-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6805-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6770-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6765-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6874-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6735-3p 1 0 0
chr1:43309070|43309435 hsa-miR-939-3p 0 1 0
chr1:43309070|43309435 hsa-miR-5088-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6772-3p 0 1 0
chr1:43309070|43309435 hsa-miR-1908-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6753-5p 1 0 0
chr1:43309070|43309435 hsa-miR-1266-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6736-3p 1 0 0
chr1:43309070|43309435 hsa-miR-146b-3p 0 1 0
chr1:43309070|43309435 hsa-miR-4640-3p 1 1 0
chr1:43309070|43309435 hsa-miR-7160-3p 0 1 0
chr1:43309070|43309435 hsa-miR-3922-5p 1 1 0
chr1:43309070|43309435 hsa-miR-1236-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6785-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6793-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6886-3p 0 1 0
chr1:43309070|43309435 hsa-miR-4749-3p 0 1 0
chr1:43309070|43309435 hsa-miR-3151-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6859-3p 1 1 0
chr1:43309070|43309435 hsa-miR-4649-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6802-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6748-3p 1 1 0
chr1:43309070|43309435 hsa-miR-4433b-5p 1 0 0
chr1:43309070|43309435 hsa-miR-6734-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6729-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6808-3p 0 1 0
chr1:43309070|43309435 hsa-miR-758-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6775-5p 0 1 0
chr1:43309070|43309435 hsa-miR-10401-5p 1 0 0
chr1:43309070|43309435 hsa-miR-3127-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6836-5p 0 1 0
chr1:43309070|43309435 hsa-miR-10396a-5p 1 0 0
chr1:43309070|43309435 hsa-miR-10396b-5p 1 0 0
chr1:43309070|43309435 hsa-miR-328-5p 1 0 0
chr1:43309070|43309435 hsa-miR-4632-5p 1 0 0
chr1:43309070|43309435 hsa-miR-4685-5p 1 1 0
chr1:43309070|43309435 hsa-miR-4726-5p 0 1 0
chr1:43309070|43309435 hsa-miR-4745-5p 1 0 0
chr1:43309070|43309435 hsa-miR-4749-5p 1 0 0
chr1:43309070|43309435 hsa-miR-6846-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6848-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6845-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6885-5p 1 0 0
chr1:43309070|43309435 hsa-miR-1271-3p 0 1 0
chr1:43309070|43309435 hsa-miR-5008-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6753-3p 1 0 0
chr1:43309070|43309435 hsa-miR-4722-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6727-3p 0 1 0
chr1:43309070|43309435 hsa-miR-4757-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6511a-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6756-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6784-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6862-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6810-3p 1 0 0
chr1:43309070|43309435 hsa-miR-10392-3p 1 0 0
chr1:43309070|43309435 hsa-miR-125a-5p 1 1 0
chr1:43309070|43309435 hsa-miR-6511b-3p 1 1 0
chr1:43309070|43309435 hsa-miR-6744-3p 0 1 0
chr1:43309070|43309435 hsa-miR-10394-5p 0 1 0
chr1:43309070|43309435 hsa-miR-4691-5p 1 0 0
chr1:43309070|43309435 hsa-miR-6817-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6500-5p 0 1 0
chr1:43309070|43309435 hsa-miR-6827-3p 0 1 0
chr1:43309070|43309435 hsa-miR-4690-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6737-3p 1 0 0
chr1:43309070|43309435 hsa-miR-6834-3p 0 1 0
chr1:43309070|43309435 hsa-miR-6820-3p 1 1 0
chr1:43309070|43309435 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:43309070|43309435
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MGEGDRSQGTGTSVAGTQVSVWTDGRTEAQWQPPHQSA
Nucleotide Sequence ATGGGGGAAGGGGACAGGTCACAGGGAACGGGCACCTCTGTGGCAGGCACCCAGGTGTCCGTCTGGACTGATGGCAGGACAGAGGCCCAGTGGCAGCCCCCTCACCAATCAGCCTGA

CircID chr1:43309070|43309435
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MWQAPRCPSGLMAGQRPSGSPLTNQPDLM
Nucleotide Sequence CTGTGGCAGGCACCCAGGTGTCCGTCTGGACTGATGGCAGGACAGAGGCCCAGTGGCAGCCCCCTCACCAATCAGCCTGACCTCATGTGA

CircID chr1:43309070|43309435
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MWSSLAPQWPWWTKRDGGRGQVTGNGHLCGRHPGVRLD
Nucleotide Sequence CTGTGGTCTTCTCTGGCTCCACAATGGCCTTGGTGGACTAAAAGAGATGGGGGAAGGGGACAGGTCACAGGGAACGGGCACCTCTGTGGCAGGCACCCAGGTGTCCGTCTGGACTGA

CircID chr1:43309070|43309435
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MTSCEQWSGQWVGPAESSEGLGGLRDQL
Nucleotide Sequence CTGACCTCATGTGAGCAATGGTCAGGCCAATGGGTGGGCCCTGCAGAAAGTTCTGAGGGACTAGGGGGTCTTAGGGATCAGCTGTGA

CircID chr1:43309070|43309435
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MVGWGDWGLTRSTVPSGLRSSMLPRTGKGF
Nucleotide Sequence CTGGTGGGTTGGGGTGATTGGGGGCTGACCAGGAGCACAGTGCCGTCTGGCTTGCGTAGCTCTATGCTGCCCCGCACGGGGAAGGGGTTC

CircID chr1:43309070|43309435
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MVRGLPLGLCPAISPDGHLGACHRGARSL
Nucleotide Sequence TTGGTGAGGGGGCTGCCACTGGGCCTCTGTCCTGCCATCAGTCCAGACGGACACCTGGGTGCCTGCCACAGAGGTGCCCGTTCCCTGTGA

CircID chr1:43309070|43309435
ORF Type ORF7
Protein Length 44
Nucleotide Length 132
Protein Sequence MPSVQTDTWVPATEVPVPCDLSPSPISFSPPRPLWSQRRPQLSS
Nucleotide Sequence CTGCCATCAGTCCAGACGGACACCTGGGTGCCTGCCACAGAGGTGCCCGTTCCCTGTGACCTGTCCCCTTCCCCCATCTCTTTTAGTCCACCAAGGCCATTGTGGAGCCAGAGAAGACCACAGCTGAGTTCG

CircID chr1:43309070|43309435
ORF Type ORF8
Protein Length 53
Nucleotide Length 162
Protein Sequence MIGEGAATGPLSCHQSRRTPGCLPQRCPFPVTCPLPPSLLVHQGHCGAREDHS
Nucleotide Sequence CTGATTGGTGAGGGGGCTGCCACTGGGCCTCTGTCCTGCCATCAGTCCAGACGGACACCTGGGTGCCTGCCACAGAGGTGCCCGTTCCCTGTGACCTGTCCCCTTCCCCCATCTCTTTTAGTCCACCAAGGCCATTGTGGAGCCAGAGAAGACCACAGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites