CircRNA Information

General Information
circRNA Basic Information
CircID chr1:43452160|43452369
Strand -
CircType exon
Host Gene ENSG00000198198.12;
Algorism CIRI2;
Sequence ACCCACAGAGACATGTAAGTACGTGTGTGTTTCCACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATGCCTCAGGTTCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTGCTATTCGATCAGCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGGGAAGATGGACTGGAGGCCTTGCCTCCCTTGGCTCTCTCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:43452160|43452369 hsa-miR-143-5p 0 0 1
chr1:43452160|43452369 hsa-miR-143-3p 0 0 1
chr1:43452160|43452369 hsa-miR-539-5p 0 0 1
chr1:43452160|43452369 hsa-miR-539-3p 0 0 1
chr1:43452160|43452369 hsa-miR-589-5p 0 0 1
chr1:43452160|43452369 hsa-miR-589-3p 0 0 1
chr1:43452160|43452369 hsa-miR-593-5p 0 0 1
chr1:43452160|43452369 hsa-miR-593-3p 0 0 1
chr1:43452160|43452369 hsa-miR-650 0 1 1
chr1:43452160|43452369 hsa-miR-1301-5p 0 0 1
chr1:43452160|43452369 hsa-miR-1301-3p 0 0 1
chr1:43452160|43452369 hsa-miR-920 1 1 1
chr1:43452160|43452369 hsa-miR-1299 0 0 1
chr1:43452160|43452369 hsa-miR-1321 0 0 1
chr1:43452160|43452369 hsa-miR-1827 0 0 1
chr1:43452160|43452369 hsa-miR-125a-3p 1 1 1
chr1:43452160|43452369 hsa-miR-1207-3p 0 0 1
chr1:43452160|43452369 hsa-miR-455-3p 0 0 1
chr1:43452160|43452369 hsa-miR-369-5p 0 0 1
chr1:43452160|43452369 hsa-miR-516b 0 0 1
chr1:43452160|43452369 hsa-miR-24 0 0 1
chr1:43452160|43452369 hsa-miR-762 1 0 0
chr1:43452160|43452369 hsa-miR-940 0 1 0
chr1:43452160|43452369 hsa-miR-544b 0 1 0
chr1:43452160|43452369 hsa-miR-3170 0 1 0
chr1:43452160|43452369 hsa-miR-4300 0 1 0
chr1:43452160|43452369 hsa-miR-4259 1 0 0
chr1:43452160|43452369 hsa-miR-4270 1 1 0
chr1:43452160|43452369 hsa-miR-3918 1 0 0
chr1:43452160|43452369 hsa-miR-3929 0 1 0
chr1:43452160|43452369 hsa-miR-4437 1 1 0
chr1:43452160|43452369 hsa-miR-4441 0 1 0
chr1:43452160|43452369 hsa-miR-4450 1 0 0
chr1:43452160|43452369 hsa-miR-4463 1 0 0
chr1:43452160|43452369 hsa-miR-4478 1 1 0
chr1:43452160|43452369 hsa-miR-4487 1 0 0
chr1:43452160|43452369 hsa-miR-4507 1 0 0
chr1:43452160|43452369 hsa-miR-4656 1 0 0
chr1:43452160|43452369 hsa-miR-4663 1 0 0
chr1:43452160|43452369 hsa-miR-4739 1 0 0
chr1:43452160|43452369 hsa-miR-5047 1 1 0
chr1:43452160|43452369 hsa-miR-5739 1 0 0
chr1:43452160|43452369 hsa-miR-5787 1 0 0
chr1:43452160|43452369 hsa-miR-6084 1 0 0
chr1:43452160|43452369 hsa-miR-6090 1 0 0
chr1:43452160|43452369 hsa-miR-7974 1 0 0
chr1:43452160|43452369 hsa-miR-8089 1 0 0
chr1:43452160|43452369 hsa-miR-8485 0 1 0
chr1:43452160|43452369 hsa-miR-1843 1 1 0
chr1:43452160|43452369 hsa-miR-12114 1 0 0
chr1:43452160|43452369 hsa-miR-141-5p 0 1 0
chr1:43452160|43452369 hsa-miR-128-1-5p 1 0 0
chr1:43452160|43452369 hsa-miR-7155-5p 0 1 0
chr1:43452160|43452369 hsa-miR-6765-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6894-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4687-3p 1 0 0
chr1:43452160|43452369 hsa-miR-6799-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6728-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6089 1 0 0
chr1:43452160|43452369 hsa-miR-6757-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6880-5p 1 0 0
chr1:43452160|43452369 hsa-miR-7847-3p 1 0 0
chr1:43452160|43452369 hsa-miR-6730-5p 0 1 0
chr1:43452160|43452369 hsa-miR-7160-5p 1 1 0
chr1:43452160|43452369 hsa-miR-24-3p 0 1 0
chr1:43452160|43452369 hsa-miR-6842-3p 0 1 0
chr1:43452160|43452369 hsa-miR-8069 1 0 0
chr1:43452160|43452369 hsa-miR-127-3p 0 1 0
chr1:43452160|43452369 hsa-miR-3180-3p 1 0 0
chr1:43452160|43452369 hsa-miR-6765-3p 1 0 0
chr1:43452160|43452369 hsa-miR-5008-5p 1 0 0
chr1:43452160|43452369 hsa-miR-3934-3p 0 1 0
chr1:43452160|43452369 hsa-miR-193b-5p 1 1 0
chr1:43452160|43452369 hsa-miR-3127-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4690-5p 0 1 0
chr1:43452160|43452369 hsa-miR-889-5p 0 1 0
chr1:43452160|43452369 hsa-miR-7156-3p 1 0 0
chr1:43452160|43452369 hsa-miR-3925-3p 0 1 0
chr1:43452160|43452369 hsa-miR-3922-5p 0 1 0
chr1:43452160|43452369 hsa-miR-4661-3p 0 1 0
chr1:43452160|43452369 hsa-miR-4649-3p 0 1 0
chr1:43452160|43452369 hsa-miR-1207-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6812-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6775-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6726-5p 1 1 0
chr1:43452160|43452369 hsa-miR-6754-5p 1 1 0
chr1:43452160|43452369 hsa-miR-6756-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6851-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6722-3p 1 0 0
chr1:43452160|43452369 hsa-miR-3620-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4685-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6735-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6777-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6846-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6848-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6858-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6831-5p 1 0 0
chr1:43452160|43452369 hsa-miR-939-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4769-5p 1 0 0
chr1:43452160|43452369 hsa-miR-1266-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6758-5p 0 1 0
chr1:43452160|43452369 hsa-miR-6855-5p 1 1 0
chr1:43452160|43452369 hsa-miR-4646-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4747-5p 1 0 0
chr1:43452160|43452369 hsa-miR-302c-3p 1 0 0
chr1:43452160|43452369 hsa-miR-6762-5p 1 0 0
chr1:43452160|43452369 hsa-miR-4756-5p 0 1 0
chr1:43452160|43452369 hsa-miR-6884-5p 1 0 0
chr1:43452160|43452369 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:43452160|43452369
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MSQNPSCMPQVLQKNGLHLSLDCYSISSLGYSASHQVDPVGKMDWRPCLPWLSLH
Nucleotide Sequence CTGAGCCAAAACCCCAGCTGCATGCCTCAGGTTCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTGCTATTCGATCAGCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGGGAAGATGGACTGGAGGCCTTGCCTCCCTTGGCTCTCTCTGCAC

CircID chr1:43452160|43452369
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MTAIRSAPWGTRPAIRWILWGRWTGGLASLGSLC
Nucleotide Sequence TTGACTGCTATTCGATCAGCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGGGAAGATGGACTGGAGGCCTTGCCTCCCTTGGCTCTCTCTGC

CircID chr1:43452160|43452369
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MLFDQLPGVLGQPSGGSCGEDGLEALPPLALSA
Nucleotide Sequence CTGCTATTCGATCAGCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGGGAAGATGGACTGGAGGCCTTGCCTCCCTTGGCTCTCTCTGCA

CircID chr1:43452160|43452369
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MMAGRVPQGADRIAVKAEMEAVFLENLRHAAGVLAQVRKVETHTYLHVSVG
Nucleotide Sequence CTGATGGCTGGCCGAGTACCCCAGGGAGCTGATCGAATAGCAGTCAAGGCTGAGATGGAGGCCGTTTTTCTGGAGAACCTGAGGCATGCAGCTGGGGTTTTGGCTCAGGTGAGAAAGGTGGAAACACACACGTACTTACATGTCTCTGTGGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites