CircRNA Information

General Information
circRNA Basic Information
CircID chr1:43994871|43995030
Strand +
CircType exon
Host Gene ENSG00000159214.11;
Algorism CIRI2;
Sequence CTCCAGCCTCAGCAGGAGCCCCACCCAACCTGTCCTTCCTCAGCCCACACTGCCCTCTGCTGCTTGGGGGCTGACCCAGCATAGACGTCTGGCCCCTGTGAGGCTCTTTCTGGGCAGGAAGTATCTTCCCCTCGCCTGCCTCACCCTGGCAGGCATCCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:43994871|43995030 hsa-miR-15a-5p 0 0 1
chr1:43994871|43995030 hsa-miR-15a-3p 0 0 1
chr1:43994871|43995030 hsa-miR-34a-5p 0 0 1
chr1:43994871|43995030 hsa-miR-34a-3p 0 0 1
chr1:43994871|43995030 hsa-miR-15b-5p 0 0 1
chr1:43994871|43995030 hsa-miR-15b-3p 0 0 1
chr1:43994871|43995030 hsa-miR-195-5p 0 0 1
chr1:43994871|43995030 hsa-miR-195-3p 0 0 1
chr1:43994871|43995030 hsa-miR-370-5p 0 0 1
chr1:43994871|43995030 hsa-miR-370-3p 0 0 1
chr1:43994871|43995030 hsa-miR-424-5p 0 0 1
chr1:43994871|43995030 hsa-miR-424-3p 0 0 1
chr1:43994871|43995030 hsa-miR-449a 0 0 1
chr1:43994871|43995030 hsa-miR-497-5p 0 0 1
chr1:43994871|43995030 hsa-miR-497-3p 0 0 1
chr1:43994871|43995030 hsa-miR-449b-5p 0 0 1
chr1:43994871|43995030 hsa-miR-449b-3p 0 0 1
chr1:43994871|43995030 hsa-miR-922 0 1 1
chr1:43994871|43995030 hsa-miR-940 0 0 1
chr1:43994871|43995030 hsa-miR-1293 0 0 1
chr1:43994871|43995030 hsa-miR-1262 0 0 1
chr1:43994871|43995030 hsa-miR-1276 0 0 1
chr1:43994871|43995030 hsa-miR-1827 0 0 1
chr1:43994871|43995030 hsa-miR-485-5p 0 0 1
chr1:43994871|43995030 hsa-miR-513a-5p 0 1 1
chr1:43994871|43995030 hsa-miR-34c-5p 0 1 1
chr1:43994871|43995030 hsa-miR-16 0 0 1
chr1:43994871|43995030 hsa-miR-220c 0 0 1
chr1:43994871|43995030 hsa-miR-637 1 0 0
chr1:43994871|43995030 hsa-miR-658 1 0 0
chr1:43994871|43995030 hsa-miR-762 1 0 0
chr1:43994871|43995030 hsa-miR-936 1 0 0
chr1:43994871|43995030 hsa-miR-3132 1 0 0
chr1:43994871|43995030 hsa-miR-3141 1 0 0
chr1:43994871|43995030 hsa-miR-4296 1 1 0
chr1:43994871|43995030 hsa-miR-4302 0 1 0
chr1:43994871|43995030 hsa-miR-4322 1 1 0
chr1:43994871|43995030 hsa-miR-4265 1 1 0
chr1:43994871|43995030 hsa-miR-3907 1 0 0
chr1:43994871|43995030 hsa-miR-3911 1 0 0
chr1:43994871|43995030 hsa-miR-3943 0 1 0
chr1:43994871|43995030 hsa-miR-4481 1 0 0
chr1:43994871|43995030 hsa-miR-4498 1 0 0
chr1:43994871|43995030 hsa-miR-4505 1 0 0
chr1:43994871|43995030 hsa-miR-4507 1 0 0
chr1:43994871|43995030 hsa-miR-4533 0 1 0
chr1:43994871|43995030 hsa-miR-1587 1 1 0
chr1:43994871|43995030 hsa-miR-4651 1 0 0
chr1:43994871|43995030 hsa-miR-4656 1 1 0
chr1:43994871|43995030 hsa-miR-4688 1 0 0
chr1:43994871|43995030 hsa-miR-4689 1 0 0
chr1:43994871|43995030 hsa-miR-4710 0 1 0
chr1:43994871|43995030 hsa-miR-4721 1 0 0
chr1:43994871|43995030 hsa-miR-4739 1 0 0
chr1:43994871|43995030 hsa-miR-4741 1 0 0
chr1:43994871|43995030 hsa-miR-5787 1 0 0
chr1:43994871|43995030 hsa-miR-6127 1 0 0
chr1:43994871|43995030 hsa-miR-6133 1 1 0
chr1:43994871|43995030 hsa-miR-8072 1 0 0
chr1:43994871|43995030 hsa-miR-8077 1 0 0
chr1:43994871|43995030 hsa-miR-8089 1 0 0
chr1:43994871|43995030 hsa-miR-4435 1 0 0
chr1:43994871|43995030 hsa-miR-92a-2-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6765-5p 1 1 0
chr1:43994871|43995030 hsa-miR-6894-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6799-5p 1 0 0
chr1:43994871|43995030 hsa-miR-1227-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6089 1 0 0
chr1:43994871|43995030 hsa-miR-4695-5p 1 0 0
chr1:43994871|43995030 hsa-miR-3677-5p 1 0 0
chr1:43994871|43995030 hsa-miR-7154-3p 0 1 0
chr1:43994871|43995030 hsa-miR-7160-5p 1 1 0
chr1:43994871|43995030 hsa-miR-6820-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6759-5p 1 0 0
chr1:43994871|43995030 hsa-miR-197-5p 1 0 0
chr1:43994871|43995030 hsa-miR-5589-5p 0 1 0
chr1:43994871|43995030 hsa-miR-7845-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6783-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6742-5p 1 0 0
chr1:43994871|43995030 hsa-miR-3180-3p 1 0 0
chr1:43994871|43995030 hsa-miR-6748-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6793-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6796-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6829-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6805-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6798-5p 1 0 0
chr1:43994871|43995030 hsa-miR-2467-3p 1 1 0
chr1:43994871|43995030 hsa-miR-5006-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6786-5p 1 0 0
chr1:43994871|43995030 hsa-miR-1226-5p 1 0 0
chr1:43994871|43995030 hsa-miR-1229-5p 1 0 0
chr1:43994871|43995030 hsa-miR-4640-5p 1 0 0
chr1:43994871|43995030 hsa-miR-296-3p 1 0 0
chr1:43994871|43995030 hsa-miR-4690-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6847-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6789-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6781-5p 1 0 0
chr1:43994871|43995030 hsa-miR-664b-5p 1 0 0
chr1:43994871|43995030 hsa-miR-3074-5p 0 1 0
chr1:43994871|43995030 hsa-miR-2114-3p 0 1 0
chr1:43994871|43995030 hsa-miR-3675-5p 1 1 0
chr1:43994871|43995030 hsa-miR-4763-3p 1 0 0
chr1:43994871|43995030 hsa-miR-6778-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6812-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6816-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6865-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6893-5p 0 1 0
chr1:43994871|43995030 hsa-miR-5001-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6743-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6752-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6756-5p 1 1 0
chr1:43994871|43995030 hsa-miR-7110-5p 1 0 0
chr1:43994871|43995030 hsa-miR-10401-5p 1 1 0
chr1:43994871|43995030 hsa-miR-6722-3p 1 1 0
chr1:43994871|43995030 hsa-miR-6779-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6797-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6808-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6879-5p 1 1 0
chr1:43994871|43995030 hsa-miR-3620-5p 1 1 0
chr1:43994871|43995030 hsa-miR-5196-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6780b-5p 1 1 0
chr1:43994871|43995030 hsa-miR-10396b-5p 1 0 0
chr1:43994871|43995030 hsa-miR-1909-3p 1 0 0
chr1:43994871|43995030 hsa-miR-328-5p 1 0 0
chr1:43994871|43995030 hsa-miR-4632-5p 1 1 0
chr1:43994871|43995030 hsa-miR-4649-5p 1 0 0
chr1:43994871|43995030 hsa-miR-4725-3p 1 0 0
chr1:43994871|43995030 hsa-miR-4726-5p 1 1 0
chr1:43994871|43995030 hsa-miR-4745-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6735-5p 1 1 0
chr1:43994871|43995030 hsa-miR-6738-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6846-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6848-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6858-5p 1 1 0
chr1:43994871|43995030 hsa-miR-6845-5p 1 1 0
chr1:43994871|43995030 hsa-miR-939-5p 1 0 0
chr1:43994871|43995030 hsa-miR-4758-5p 1 0 0
chr1:43994871|43995030 hsa-miR-4769-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6511a-5p 1 0 0
chr1:43994871|43995030 hsa-miR-3940-5p 1 1 0
chr1:43994871|43995030 hsa-miR-4700-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6876-5p 0 1 0
chr1:43994871|43995030 hsa-miR-6766-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6785-5p 1 0 0
chr1:43994871|43995030 hsa-miR-3184-5p 1 0 0
chr1:43994871|43995030 hsa-miR-6762-5p 1 0 0
chr1:43994871|43995030 hsa-miR-10400-3p 1 0 0
chr1:43994871|43995030 hsa-miR-6838-5p 0 1 0
chr1:43994871|43995030 hsa-miR-10524-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:43994871|43995030
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MPSAAWGLTQHRRLAPVRLFLGRKYLPLACLTLAGIL
Nucleotide Sequence CTGCCCTCTGCTGCTTGGGGGCTGACCCAGCATAGACGTCTGGCCCCTGTGAGGCTCTTTCTGGGCAGGAAGTATCTTCCCCTCGCCTGCCTCACCCTGGCAGGCATCCTT
CircID chr1:43994871|43995030
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MLGQPPSSRGQCGLRKDRLGGAPAEAG
Nucleotide Sequence ATGCTGGGTCAGCCCCCAAGCAGCAGAGGGCAGTGTGGGCTGAGGAAGGACAGGTTGGGTGGGGCTCCTGCTGAGGCTGGA
CircID chr1:43994871|43995030
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MPARVRQARGRYFLPRKSLTGARRLCWVSPQAAEGSVG
Nucleotide Sequence ATGCCTGCCAGGGTGAGGCAGGCGAGGGGAAGATACTTCCTGCCCAGAAAGAGCCTCACAGGGGCCAGACGTCTATGCTGGGTCAGCCCCCAAGCAGCAGAGGGCAGTGTGGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab