CircRNA Information

General Information
circRNA Basic Information
CircID chr1:44218395|44218731
Strand -
CircType exon
Host Gene ENSG00000178028.12;
Algorism CIRI2;
Sequence CTCTTTGACCTCAGCCGCCGCTTTGACCTGCGTTTTGTTGTTATCCATGACCGGTATGACCACCAGCAGTTCAAGGTGAGCCATTGTGTATTTGCATGGGTGCCCAGCTTCTGGGTCTAGCAGGCCCTACTTTTATGCCATCTCTTCCACATGCCCCTGAATGTTCATTCCTCTACCCTGTCTTGCTCCTCAGAAGCGTTCTGTGGAAGACCTGAAGGAGCGGTACTACCACATCTGTGCTAAGCTTGCCAACGTGCGGGCTGTGCCAGGCACAGACCTTAAGATACCAGTATTTGATGCTGGGCACGAACGACGGCGGAAGGAACAGCTTGAGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:44218395|44218731 hsa-miR-31-5p 0 0 1
chr1:44218395|44218731 hsa-miR-31-3p 0 0 1
chr1:44218395|44218731 hsa-miR-181c-5p 0 0 1
chr1:44218395|44218731 hsa-miR-181c-3p 0 0 1
chr1:44218395|44218731 hsa-miR-182-5p 0 0 1
chr1:44218395|44218731 hsa-miR-182-3p 0 0 1
chr1:44218395|44218731 hsa-miR-205-5p 0 0 1
chr1:44218395|44218731 hsa-miR-205-3p 0 0 1
chr1:44218395|44218731 hsa-miR-200b-5p 0 0 1
chr1:44218395|44218731 hsa-miR-200b-3p 0 0 1
chr1:44218395|44218731 hsa-miR-200c-5p 0 0 1
chr1:44218395|44218731 hsa-miR-200c-3p 0 0 1
chr1:44218395|44218731 hsa-miR-429 0 0 1
chr1:44218395|44218731 hsa-miR-181d-5p 0 0 1
chr1:44218395|44218731 hsa-miR-181d-3p 0 0 1
chr1:44218395|44218731 hsa-miR-517-5p 0 0 1
chr1:44218395|44218731 hsa-miR-517a-3p 0 0 1
chr1:44218395|44218731 hsa-miR-517c-3p 0 0 1
chr1:44218395|44218731 hsa-miR-612 0 0 1
chr1:44218395|44218731 hsa-miR-661 0 0 1
chr1:44218395|44218731 hsa-miR-1296-5p 0 0 1
chr1:44218395|44218731 hsa-miR-1296-3p 0 0 1
chr1:44218395|44218731 hsa-miR-877-5p 0 0 1
chr1:44218395|44218731 hsa-miR-877-3p 0 0 1
chr1:44218395|44218731 hsa-miR-543 0 0 1
chr1:44218395|44218731 hsa-miR-1261 0 0 1
chr1:44218395|44218731 hsa-miR-548n 0 0 1
chr1:44218395|44218731 hsa-miR-1306-5p 0 0 1
chr1:44218395|44218731 hsa-miR-1306-3p 0 0 1
chr1:44218395|44218731 hsa-miR-330-3p 0 0 1
chr1:44218395|44218731 hsa-miR-490-5p 0 0 1
chr1:44218395|44218731 hsa-miR-876-3p 0 0 1
chr1:44218395|44218731 hsa-miR-576-3p 0 0 1
chr1:44218395|44218731 hsa-miR-338-3p 0 1 1
chr1:44218395|44218731 hsa-miR-574-3p 0 0 1
chr1:44218395|44218731 hsa-miR-323-5p 0 0 1
chr1:44218395|44218731 hsa-miR-550 0 0 1
chr1:44218395|44218731 hsa-miR-7 0 0 1
chr1:44218395|44218731 hsa-miR-138 0 0 1
chr1:44218395|44218731 hsa-miR-181a 0 0 1
chr1:44218395|44218731 hsa-miR-181b 0 0 1
chr1:44218395|44218731 hsa-miR-1285 0 0 1
chr1:44218395|44218731 hsa-miR-1254 0 0 1
chr1:44218395|44218731 hsa-miR-24 0 0 1
chr1:44218395|44218731 hsa-miR-768-3p 0 0 1
chr1:44218395|44218731 hsa-miR-636 0 1 0
chr1:44218395|44218731 hsa-miR-638 1 0 0
chr1:44218395|44218731 hsa-miR-2113 0 1 0
chr1:44218395|44218731 hsa-miR-1268a 1 0 0
chr1:44218395|44218731 hsa-miR-3125 1 0 0
chr1:44218395|44218731 hsa-miR-3132 1 1 0
chr1:44218395|44218731 hsa-miR-3169 0 1 0
chr1:44218395|44218731 hsa-miR-3197 1 0 0
chr1:44218395|44218731 hsa-miR-4253 0 1 0
chr1:44218395|44218731 hsa-miR-4271 1 0 0
chr1:44218395|44218731 hsa-miR-3651 0 1 0
chr1:44218395|44218731 hsa-miR-3665 1 0 0
chr1:44218395|44218731 hsa-miR-1268b 1 0 0
chr1:44218395|44218731 hsa-miR-4436a 1 0 0
chr1:44218395|44218731 hsa-miR-4448 0 1 0
chr1:44218395|44218731 hsa-miR-4463 1 0 0
chr1:44218395|44218731 hsa-miR-4514 1 0 0
chr1:44218395|44218731 hsa-miR-3960 0 1 0
chr1:44218395|44218731 hsa-miR-4657 1 1 0
chr1:44218395|44218731 hsa-miR-4688 1 1 0
chr1:44218395|44218731 hsa-miR-4689 1 1 0
chr1:44218395|44218731 hsa-miR-4739 1 0 0
chr1:44218395|44218731 hsa-miR-5687 0 1 0
chr1:44218395|44218731 hsa-miR-6076 1 0 0
chr1:44218395|44218731 hsa-miR-6081 1 0 0
chr1:44218395|44218731 hsa-miR-6165 1 0 0
chr1:44218395|44218731 hsa-miR-6863 1 0 0
chr1:44218395|44218731 hsa-miR-7150 1 0 0
chr1:44218395|44218731 hsa-miR-8072 0 1 0
chr1:44218395|44218731 hsa-miR-8085 1 0 0
chr1:44218395|44218731 hsa-miR-8089 1 0 0
chr1:44218395|44218731 hsa-miR-11399 0 1 0
chr1:44218395|44218731 hsa-miR-12119 1 1 0
chr1:44218395|44218731 hsa-miR-12128 1 0 0
chr1:44218395|44218731 hsa-miR-370-3p 0 1 0
chr1:44218395|44218731 hsa-miR-6734-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6747-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6720-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6728-5p 1 0 0
chr1:44218395|44218731 hsa-miR-3692-5p 0 1 0
chr1:44218395|44218731 hsa-miR-6833-5p 0 1 0
chr1:44218395|44218731 hsa-miR-7114-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6880-5p 1 0 0
chr1:44218395|44218731 hsa-miR-7847-3p 1 0 0
chr1:44218395|44218731 hsa-miR-7160-5p 0 1 0
chr1:44218395|44218731 hsa-miR-6727-5p 1 0 0
chr1:44218395|44218731 hsa-miR-197-5p 1 1 0
chr1:44218395|44218731 hsa-miR-5589-5p 1 0 0
chr1:44218395|44218731 hsa-miR-27b-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6868-3p 0 1 0
chr1:44218395|44218731 hsa-miR-3190-3p 0 1 0
chr1:44218395|44218731 hsa-miR-6798-5p 1 0 0
chr1:44218395|44218731 hsa-miR-3127-5p 1 0 0
chr1:44218395|44218731 hsa-miR-423-5p 1 0 0
chr1:44218395|44218731 hsa-miR-4529-3p 0 1 0
chr1:44218395|44218731 hsa-miR-483-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6755-5p 0 1 0
chr1:44218395|44218731 hsa-miR-3664-3p 1 0 0
chr1:44218395|44218731 hsa-miR-181a-5p 0 1 0
chr1:44218395|44218731 hsa-miR-1207-5p 1 0 0
chr1:44218395|44218731 hsa-miR-1233-5p 1 0 0
chr1:44218395|44218731 hsa-miR-4763-3p 1 0 0
chr1:44218395|44218731 hsa-miR-6778-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6893-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6775-5p 1 1 0
chr1:44218395|44218731 hsa-miR-1343-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6743-5p 1 1 0
chr1:44218395|44218731 hsa-miR-6752-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6813-5p 1 0 0
chr1:44218395|44218731 hsa-miR-7110-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6763-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6808-5p 1 0 0
chr1:44218395|44218731 hsa-miR-5189-5p 1 1 0
chr1:44218395|44218731 hsa-miR-5196-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6862-5p 1 1 0
chr1:44218395|44218731 hsa-miR-328-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6858-5p 1 1 0
chr1:44218395|44218731 hsa-miR-3187-5p 0 1 0
chr1:44218395|44218731 hsa-miR-4723-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6831-5p 1 0 0
chr1:44218395|44218731 hsa-miR-939-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6758-5p 1 0 0
chr1:44218395|44218731 hsa-miR-1271-3p 0 1 0
chr1:44218395|44218731 hsa-miR-4700-5p 1 1 0
chr1:44218395|44218731 hsa-miR-3679-5p 1 0 0
chr1:44218395|44218731 hsa-miR-4667-5p 1 0 0
chr1:44218395|44218731 hsa-miR-6753-3p 0 1 0
chr1:44218395|44218731 hsa-miR-6529-3p 0 1 0
chr1:44218395|44218731 hsa-miR-6859-5p 0 1 0
chr1:44218395|44218731 hsa-miR-1295b-5p 0 1 0
chr1:44218395|44218731 hsa-miR-487b-5p 0 1 0
chr1:44218395|44218731 hsa-miR-151a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:44218395|44218731
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MRFVVIHDRYDHQQFKVSHCVFAWVPSFWV
Nucleotide Sequence CTGCGTTTTGTTGTTATCCATGACCGGTATGACCACCAGCAGTTCAAGGTGAGCCATTGTGTATTTGCATGGGTGCCCAGCTTCTGGGTCTAG

CircID chr1:44218395|44218731
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MPLNVHSSTLSCSSEAFCGRPEGAVLPHLC
Nucleotide Sequence ATGCCCCTGAATGTTCATTCCTCTACCCTGTCTTGCTCCTCAGAAGCGTTCTGTGGAAGACCTGAAGGAGCGGTACTACCACATCTGTGCTAA

CircID chr1:44218395|44218731
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MFIPLPCLAPQKRSVEDLKERYYHICAKLANVRAVPGTDLKIPVFDAGHERRRKEQLER
Nucleotide Sequence ATGTTCATTCCTCTACCCTGTCTTGCTCCTCAGAAGCGTTCTGTGGAAGACCTGAAGGAGCGGTACTACCACATCTGTGCTAAGCTTGCCAACGTGCGGGCTGTGCCAGGCACAGACCTTAAGATACCAGTATTTGATGCTGGGCACGAACGACGGCGGAAGGAACAGCTTGAGCGT

CircID chr1:44218395|44218731
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MCICMGAQLLGLAGPTFMPSLPHAPECSFLYPVLLLRSVLWKT
Nucleotide Sequence TTGTGTATTTGCATGGGTGCCCAGCTTCTGGGTCTAGCAGGCCCTACTTTTATGCCATCTCTTCCACATGCCCCTGAATGTTCATTCCTCTACCCTGTCTTGCTCCTCAGAAGCGTTCTGTGGAAGACCTGA

CircID chr1:44218395|44218731
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MPTCGLCQAQTLRYQYLMLGTNDGGRNSLS
Nucleotide Sequence TTGCCAACGTGCGGGCTGTGCCAGGCACAGACCTTAAGATACCAGTATTTGATGCTGGGCACGAACGACGGCGGAAGGAACAGCTTGAGC

CircID chr1:44218395|44218731
ORF Type ORF6
Protein Length 51
Nucleotide Length 156
Protein Sequence MFLPPSFVPSIKYWYLKVCAWHSPHVGKLSTDVVVPLLQVFHRTLLRSKTG
Nucleotide Sequence CTGTTCCTTCCGCCGTCGTTCGTGCCCAGCATCAAATACTGGTATCTTAAGGTCTGTGCCTGGCACAGCCCGCACGTTGGCAAGCTTAGCACAGATGTGGTAGTACCGCTCCTTCAGGTCTTCCACAGAACGCTTCTGAGGAGCAAGACAGGGTAG

CircID chr1:44218395|44218731
ORF Type ORF7
Protein Length 41
Nucleotide Length 123
Protein Sequence MLDPEAGHPCKYTMAHLELLVVIPVMDNNKTQVKAAAEVKE
Nucleotide Sequence CTGCTAGACCCAGAAGCTGGGCACCCATGCAAATACACAATGGCTCACCTTGAACTGCTGGTGGTCATACCGGTCATGGATAACAACAAAACGCAGGTCAAAGCGGCGGCTGAGGTCAAAGAG

CircID chr1:44218395|44218731
ORF Type ORF8
Protein Length 35
Nucleotide Length 105
Protein Sequence MGTHANTQWLTLNCWWSYRSWITTKRRSKRRLRSK
Nucleotide Sequence CTGGGCACCCATGCAAATACACAATGGCTCACCTTGAACTGCTGGTGGTCATACCGGTCATGGATAACAACAAAACGCAGGTCAAAGCGGCGGCTGAGGTCAAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites