CircNet

General Information

circRNA Basic Information

CircID	chr1:44308310\|44319744
Strand	-
CircType	exon
Host Gene	ENSG00000117419.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAATCATCGAGTTCCCCATCCTAAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAATGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:44308310\|44319744	hsa-miR-9-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:44308310\|44319744
ORF Type	ORF1
Protein Length	75
Nucleotide Length	225
Protein Sequence	MEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKV
Nucleotide Sequence	ATGGAGATTGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAATGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTC

CircID	chr1:44308310\|44319744
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MTFKSQSPQVTKIDLTFGSKRPSFAIHSSTLSSTCCRLG*
Nucleotide Sequence	ATGACTTTTAAGTCCCAGTCTCCACAGGTGACAAAAATTGACTTGACGTTTGGATCTAAGAGGCCTTCCTTCGCCATCCATTCATCGACCCTCTCCAGCACTTGCTGCAGGCTTGGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:44308310\|44319744	NOP56	1	0	0
chr1:44308310\|44319744	MOV10	0	0	4
chr1:44308310\|44319744	ELAVL1	3	1	3
chr1:44308310\|44319744	CELF2	0	2	2
chr1:44308310\|44319744	TAF15	1	0	0
chr1:44308310\|44319744	FMR1	0	0	1
chr1:44308310\|44319744	FUS	2	0	0
chr1:44308310\|44319744	DGCR8	0	0	1
chr1:44308310\|44319744	SRSF1	0	1	0
chr1:44308310\|44319744	NOP58	1	0	0
chr1:44308310\|44319744	U2AF2	7	1	0
chr1:44308310\|44319744	DDX54	0	0	5
chr1:44308310\|44319744	RBM10	3	0	0
chr1:44308310\|44319744	FIP1L1	0	0	1
chr1:44308310\|44319744	PTBP1	1	1	1
chr1:44308310\|44319744	HNRNPC	1	0	1
chr1:44308310\|44319744	HNRNPA1	0	1	0
chr1:44308310\|44319744	MSI2	0	0	1
chr1:44308310\|44319744	ACIN1	0	0	3
chr1:44308310\|44319744	IGF2BP1	0	0	2
chr1:44308310\|44319744	IGF2BP3	0	0	1
chr1:44308310\|44319744	IGF2BP2	0	1	3
chr1:44308310\|44319744	TARDBP	0	4	1
chr1:44308310\|44319744	CSTF2T	0	0	1
chr1:44308310\|44319744	CSTF2	0	0	1
chr1:44308310\|44319744	FBL	1	1	2
chr1:44308310\|44319744	AGO1	0	0	1
chr1:44308310\|44319744	EIF4A3	3	6	4
chr1:44308310\|44319744	AGO2	0	1	2

CircRNA Information