CircNet

General Information

circRNA Basic Information

CircID	chr1:44339129\|44339274
Strand	-
CircType	exon
Host Gene	ENSG00000117419.13;
Algorism	CIRI2;
Sequence	CATTGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGGAGCAGAACTCCGGAACACCACAGGGAGAAAATAAGTGGGAGCCCAGCACTTTTCTTGCTCTTGAAAGTAAATACGAAGAAAATCGAGCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:44339129\|44339274	hsa-miR-17-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-17-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-20a-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-20a-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-93-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-93-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-106a-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-106a-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-320a-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-320a-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-106b-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-106b-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-302a-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-302a-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-302b-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-302b-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-302c-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-302c-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-302d-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-302d-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-372-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-372-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-373-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-373-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-335-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-335-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-20b-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-20b-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-498-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-498-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-520e-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-520e-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-520b-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-520b-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-519d-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-519d-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-1203	0	0	1
chr1:44339129\|44339274	hsa-miR-302e	0	0	1
chr1:44339129\|44339274	hsa-miR-512-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-532-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-339-5p	0	0	1
chr1:44339129\|44339274	hsa-miR-767-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-320b	0	0	1
chr1:44339129\|44339274	hsa-miR-320c	0	0	1
chr1:44339129\|44339274	hsa-miR-520d-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-320d	0	0	1
chr1:44339129\|44339274	hsa-miR-520a-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-520c-3p	0	0	1
chr1:44339129\|44339274	hsa-miR-1274a	0	0	1
chr1:44339129\|44339274	hsa-miR-1274b	0	0	1
chr1:44339129\|44339274	hsa-miR-548q	1	0	0
chr1:44339129\|44339274	hsa-miR-3907	1	0	0
chr1:44339129\|44339274	hsa-miR-3916	1	1	0
chr1:44339129\|44339274	hsa-miR-6075	1	1	0
chr1:44339129\|44339274	hsa-miR-323a-5p	1	0	0
chr1:44339129\|44339274	hsa-miR-6822-3p	1	0	0
chr1:44339129\|44339274	hsa-miR-4713-5p	1	0	0
chr1:44339129\|44339274	hsa-miR-146b-3p	0	1	0
chr1:44339129\|44339274	hsa-miR-3158-3p	1	0	0
chr1:44339129\|44339274	hsa-miR-6828-3p	0	1	0
chr1:44339129\|44339274	hsa-miR-6770-3p	0	1	0
chr1:44339129\|44339274	hsa-miR-10400-5p	1	0	0
chr1:44339129\|44339274	hsa-miR-4685-5p	1	0	0
chr1:44339129\|44339274	hsa-miR-10400-3p	0	1	0
chr1:44339129\|44339274	hsa-miR-6783-3p	1	0	0
chr1:44339129\|44339274	hsa-miR-6874-3p	0	1	0
chr1:44339129\|44339274	hsa-miR-9902	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:44339129\|44339274
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MDAPKPWAASFLVDMEQNSGTPQGENKWEPSTFLALESKYEENRA
Nucleotide Sequence	ATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGGAGCAGAACTCCGGAACACCACAGGGAGAAAATAAGTGGGAGCCCAGCACTTTTCTTGCTCTTGAAAGTAAATACGAAGAAAATCGAGCT

CircID	chr1:44339129\|44339274
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	LPPWMRQSRGPPAFWWIWSRTPEHHREKISGSPALFLLLKVNTKKIEL
Nucleotide Sequence	TTGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGGAGCAGAACTCCGGAACACCACAGGGAGAAAATAAGTGGGAGCCCAGCACTTTTCTTGCTCTTGAAAGTAAATACGAAGAAAATCGAGCTG

CircID	chr1:44339129\|44339274
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MWCSGVLLHIHQKAGGPRLWRIHGGN
Nucleotide Sequence	CTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAAT

CircID	chr1:44339129\|44339274
ORF Type	ORF4
Protein Length	34
Nucleotide Length	102
Protein Sequence	MGSHLFSPCGVPEFCSISTRKLAAHGFGASMAAM
Nucleotide Sequence	CTGGGCTCCCACTTATTTTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information