CircRNA Information

General Information
circRNA Basic Information
CircID chr1:45002624|45002818
Strand +
CircType exon
Host Gene ENSG00000126107.13;
Algorism CIRI2;
Sequence CTCCCCATATTCCTCACTTCTCCATCACCTCCAGCCTGACTCCCTGTCTGCCCTTTCACCCCCAAGATTTTGCACAGGTTAAGGCCAGTTATGGCCTTTTTGAAATCTGTAATAGCTCCCCTTTCCCCAACTCTAAAGCCTAGACCTTAAACCTGTTCCTAGAGCTATGCACACCCCTGCCCCAGTTTACCGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:45002624|45002818 hsa-miR-19a-5p 0 0 1
chr1:45002624|45002818 hsa-miR-19a-3p 0 0 1
chr1:45002624|45002818 hsa-miR-484 0 0 1
chr1:45002624|45002818 hsa-miR-488-5p 0 0 1
chr1:45002624|45002818 hsa-miR-488-3p 0 0 1
chr1:45002624|45002818 hsa-miR-193b-5p 0 0 1
chr1:45002624|45002818 hsa-miR-193b-3p 0 0 1
chr1:45002624|45002818 hsa-miR-571 0 0 1
chr1:45002624|45002818 hsa-miR-601 1 1 1
chr1:45002624|45002818 hsa-miR-607 0 0 1
chr1:45002624|45002818 hsa-miR-635 0 0 1
chr1:45002624|45002818 hsa-miR-645 0 0 1
chr1:45002624|45002818 hsa-miR-649 0 0 1
chr1:45002624|45002818 hsa-miR-920 0 1 1
chr1:45002624|45002818 hsa-miR-939-5p 0 0 1
chr1:45002624|45002818 hsa-miR-939-3p 0 0 1
chr1:45002624|45002818 hsa-miR-1303 0 0 1
chr1:45002624|45002818 hsa-miR-548g-5p 0 0 1
chr1:45002624|45002818 hsa-miR-548g-3p 0 0 1
chr1:45002624|45002818 hsa-miR-1275 1 0 1
chr1:45002624|45002818 hsa-miR-1324 0 0 1
chr1:45002624|45002818 hsa-miR-486-3p 1 0 1
chr1:45002624|45002818 hsa-miR-490-3p 0 0 1
chr1:45002624|45002818 hsa-miR-1207-5p 1 1 1
chr1:45002624|45002818 hsa-miR-582-3p 0 0 1
chr1:45002624|45002818 hsa-miR-193a-3p 0 0 1
chr1:45002624|45002818 hsa-miR-153 0 0 1
chr1:45002624|45002818 hsa-miR-19b 0 0 1
chr1:45002624|45002818 hsa-miR-608 1 0 0
chr1:45002624|45002818 hsa-miR-762 1 0 0
chr1:45002624|45002818 hsa-miR-765 1 0 0
chr1:45002624|45002818 hsa-miR-760 1 0 0
chr1:45002624|45002818 hsa-miR-1182 1 0 0
chr1:45002624|45002818 hsa-miR-1231 1 0 0
chr1:45002624|45002818 hsa-miR-1258 1 0 0
chr1:45002624|45002818 hsa-miR-1262 1 0 0
chr1:45002624|45002818 hsa-miR-2110 1 1 0
chr1:45002624|45002818 hsa-miR-3132 1 1 0
chr1:45002624|45002818 hsa-miR-3141 1 0 0
chr1:45002624|45002818 hsa-miR-3153 0 1 0
chr1:45002624|45002818 hsa-miR-3154 1 0 0
chr1:45002624|45002818 hsa-miR-3188 1 0 0
chr1:45002624|45002818 hsa-miR-4298 1 0 0
chr1:45002624|45002818 hsa-miR-4257 1 0 0
chr1:45002624|45002818 hsa-miR-4259 1 1 0
chr1:45002624|45002818 hsa-miR-4270 1 1 0
chr1:45002624|45002818 hsa-miR-4271 1 0 0
chr1:45002624|45002818 hsa-miR-3652 1 1 0
chr1:45002624|45002818 hsa-miR-3936 1 0 0
chr1:45002624|45002818 hsa-miR-378g 1 0 0
chr1:45002624|45002818 hsa-miR-4430 1 1 0
chr1:45002624|45002818 hsa-miR-4455 0 1 0
chr1:45002624|45002818 hsa-miR-3135b 1 1 0
chr1:45002624|45002818 hsa-miR-4462 1 0 0
chr1:45002624|45002818 hsa-miR-4463 1 1 0
chr1:45002624|45002818 hsa-miR-4478 1 0 0
chr1:45002624|45002818 hsa-miR-3689c 1 0 0
chr1:45002624|45002818 hsa-miR-4498 1 0 0
chr1:45002624|45002818 hsa-miR-4505 1 0 0
chr1:45002624|45002818 hsa-miR-4507 1 0 0
chr1:45002624|45002818 hsa-miR-4510 1 0 0
chr1:45002624|45002818 hsa-miR-4514 1 0 0
chr1:45002624|45002818 hsa-miR-4516 1 0 0
chr1:45002624|45002818 hsa-miR-4534 1 1 0
chr1:45002624|45002818 hsa-miR-4651 1 0 0
chr1:45002624|45002818 hsa-miR-4673 1 0 0
chr1:45002624|45002818 hsa-miR-4688 1 0 0
chr1:45002624|45002818 hsa-miR-4706 1 0 0
chr1:45002624|45002818 hsa-miR-4739 1 0 0
chr1:45002624|45002818 hsa-miR-4748 1 0 0
chr1:45002624|45002818 hsa-miR-5090 1 0 0
chr1:45002624|45002818 hsa-miR-5572 1 0 0
chr1:45002624|45002818 hsa-miR-5698 1 0 0
chr1:45002624|45002818 hsa-miR-5703 1 1 0
chr1:45002624|45002818 hsa-miR-5787 1 0 0
chr1:45002624|45002818 hsa-miR-6081 1 0 0
chr1:45002624|45002818 hsa-miR-6124 1 0 0
chr1:45002624|45002818 hsa-miR-6127 1 0 0
chr1:45002624|45002818 hsa-miR-6129 1 0 0
chr1:45002624|45002818 hsa-miR-6134 1 0 0
chr1:45002624|45002818 hsa-miR-6745 1 0 0
chr1:45002624|45002818 hsa-miR-7150 1 0 0
chr1:45002624|45002818 hsa-miR-8063 1 0 0
chr1:45002624|45002818 hsa-miR-8075 1 0 0
chr1:45002624|45002818 hsa-miR-8078 1 0 0
chr1:45002624|45002818 hsa-miR-8082 1 1 0
chr1:45002624|45002818 hsa-miR-8085 1 0 0
chr1:45002624|45002818 hsa-miR-8089 1 0 0
chr1:45002624|45002818 hsa-miR-12114 1 0 0
chr1:45002624|45002818 hsa-miR-12115 1 0 0
chr1:45002624|45002818 hsa-miR-12118 1 0 0
chr1:45002624|45002818 hsa-miR-211-3p 1 0 0
chr1:45002624|45002818 hsa-miR-15a-3p 0 1 0
chr1:45002624|45002818 hsa-miR-6734-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4731-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6747-5p 1 1 0
chr1:45002624|45002818 hsa-miR-4433a-3p 1 0 0
chr1:45002624|45002818 hsa-miR-7106-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6857-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6799-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6515-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6757-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6880-5p 1 0 0
chr1:45002624|45002818 hsa-miR-7847-3p 1 0 0
chr1:45002624|45002818 hsa-miR-4653-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6730-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6820-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6727-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6759-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6721-5p 1 1 0
chr1:45002624|45002818 hsa-miR-197-5p 1 1 0
chr1:45002624|45002818 hsa-miR-7845-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6716-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6772-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6732-5p 1 1 0
chr1:45002624|45002818 hsa-miR-3190-3p 1 1 0
chr1:45002624|45002818 hsa-miR-6827-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6798-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6760-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6881-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6782-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6810-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6835-5p 1 0 0
chr1:45002624|45002818 hsa-miR-1226-5p 1 0 0
chr1:45002624|45002818 hsa-miR-3127-5p 1 0 0
chr1:45002624|45002818 hsa-miR-1228-5p 1 0 0
chr1:45002624|45002818 hsa-miR-296-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6823-5p 1 0 0
chr1:45002624|45002818 hsa-miR-92b-5p 1 0 0
chr1:45002624|45002818 hsa-miR-485-5p 1 1 0
chr1:45002624|45002818 hsa-miR-7854-3p 1 0 0
chr1:45002624|45002818 hsa-miR-4787-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4446-3p 1 0 0
chr1:45002624|45002818 hsa-miR-149-3p 1 0 0
chr1:45002624|45002818 hsa-miR-937-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6824-5p 1 0 0
chr1:45002624|45002818 hsa-miR-3162-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6781-5p 1 0 0
chr1:45002624|45002818 hsa-miR-5010-5p 1 0 0
chr1:45002624|45002818 hsa-miR-7112-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6832-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4750-5p 1 0 0
chr1:45002624|45002818 hsa-miR-7113-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6792-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6767-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6768-3p 0 1 0
chr1:45002624|45002818 hsa-miR-4524b-3p 0 1 0
chr1:45002624|45002818 hsa-miR-3689b-3p 1 0 0
chr1:45002624|45002818 hsa-miR-4763-3p 1 1 0
chr1:45002624|45002818 hsa-miR-6787-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6812-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6816-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6870-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6893-5p 1 0 0
chr1:45002624|45002818 hsa-miR-1343-5p 1 0 0
chr1:45002624|45002818 hsa-miR-5001-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6726-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6743-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6752-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6754-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6756-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6803-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6813-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6842-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6851-5p 1 0 0
chr1:45002624|45002818 hsa-miR-7107-5p 1 0 0
chr1:45002624|45002818 hsa-miR-7110-5p 1 1 0
chr1:45002624|45002818 hsa-miR-11181-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6722-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6751-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6763-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6808-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6879-5p 1 1 0
chr1:45002624|45002818 hsa-miR-7111-5p 1 0 0
chr1:45002624|45002818 hsa-miR-5196-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6780b-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6862-5p 1 0 0
chr1:45002624|45002818 hsa-miR-10526-3p 1 0 0
chr1:45002624|45002818 hsa-miR-328-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4632-5p 1 1 0
chr1:45002624|45002818 hsa-miR-4649-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4701-3p 1 0 0
chr1:45002624|45002818 hsa-miR-4725-3p 1 0 0
chr1:45002624|45002818 hsa-miR-4726-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4745-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6729-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6735-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6777-5p 1 1 0
chr1:45002624|45002818 hsa-miR-6794-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6795-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6848-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6887-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6889-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4436b-3p 0 1 0
chr1:45002624|45002818 hsa-miR-4723-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6885-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4758-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6511b-5p 1 0 0
chr1:45002624|45002818 hsa-miR-3940-5p 1 0 0
chr1:45002624|45002818 hsa-miR-30c-1-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6731-5p 1 0 0
chr1:45002624|45002818 hsa-miR-6758-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4665-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4700-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4747-5p 1 0 0
chr1:45002624|45002818 hsa-miR-4716-3p 1 0 0
chr1:45002624|45002818 hsa-miR-6750-5p 1 0 0
chr1:45002624|45002818 hsa-miR-5591-5p 0 1 0
chr1:45002624|45002818 hsa-miR-342-5p 1 0 0
chr1:45002624|45002818 hsa-miR-3529-5p 1 1 0
chr1:45002624|45002818 hsa-miR-10395-5p 0 1 0
chr1:45002624|45002818 hsa-miR-3059-3p 0 1 0
chr1:45002624|45002818 hsa-miR-7153-5p 1 0 0
chr1:45002624|45002818 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:45002624|45002818
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MHRLRPVMAFLKSVIAPLSPTLKPRP
Nucleotide Sequence TTGCACAGGTTAAGGCCAGTTATGGCCTTTTTGAAATCTGTAATAGCTCCCCTTTCCCCAACTCTAAAGCCTAGACCTTAA
CircID chr1:45002624|45002818
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MTPCLPFHPQDFAQVKASYGLFEICNSSPFPNSKA
Nucleotide Sequence CTGACTCCCTGTCTGCCCTTTCACCCCCAAGATTTTGCACAGGTTAAGGCCAGTTATGGCCTTTTTGAAATCTGTAATAGCTCCCCTTTCCCCAACTCTAAAGCCTAG
CircID chr1:45002624|45002818
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MCKILGVKGQTGSQAGGDGEVRNMG
Nucleotide Sequence CTGTGCAAAATCTTGGGGGTGAAAGGGCAGACAGGGAGTCAGGCTGGAGGTGATGGAGAAGTGAGGAATATGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab