CircRNA Information

General Information
circRNA Basic Information
CircID chr1:45008256|45008577
Strand +
CircType exon
Host Gene ENSG00000126107.13;
Algorism CIRI2;
Sequence CGACCCTGAAGTACTGTACCGCAGAGCTGTCCTCCTGCAGAGGTGGCTGTGGTCCTGGACCTATGGGCCCTTCCCTTCCCCCAACATTGAGCCTTGTGTGTCTGCATGGAGGAGGTTCCCAAGGTCTCATAGTATAAGCTGTTCAAGGGTCAGAGAAGCCCCCAGGTCCTGCCTTTTCCTGTCCCTTTATGTTGGGGAGTTGGGGGTGTTACAGGTATGCTAAACTCTTTAGCTGCAGTCTATCTACCCATGCCAGATTCATCAAGATCCTCGATAGTGTCCTGCACCACCTGGTACCTGCCTGGGACCACACACTGGGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:45008256|45008577 hsa-miR-21-5p 0 0 1
chr1:45008256|45008577 hsa-miR-21-3p 0 0 1
chr1:45008256|45008577 hsa-miR-144-5p 0 0 1
chr1:45008256|45008577 hsa-miR-144-3p 0 0 1
chr1:45008256|45008577 hsa-miR-492 0 1 1
chr1:45008256|45008577 hsa-miR-504-5p 0 0 1
chr1:45008256|45008577 hsa-miR-504-3p 0 0 1
chr1:45008256|45008577 hsa-miR-583 0 0 1
chr1:45008256|45008577 hsa-miR-611 0 0 1
chr1:45008256|45008577 hsa-miR-625-5p 0 0 1
chr1:45008256|45008577 hsa-miR-625-3p 0 0 1
chr1:45008256|45008577 hsa-miR-631 0 0 1
chr1:45008256|45008577 hsa-miR-637 1 1 1
chr1:45008256|45008577 hsa-miR-1301-5p 0 0 1
chr1:45008256|45008577 hsa-miR-1301-3p 0 0 1
chr1:45008256|45008577 hsa-miR-665 0 0 1
chr1:45008256|45008577 hsa-miR-940 0 1 1
chr1:45008256|45008577 hsa-miR-942-5p 0 0 1
chr1:45008256|45008577 hsa-miR-942-3p 0 0 1
chr1:45008256|45008577 hsa-miR-1205 0 1 1
chr1:45008256|45008577 hsa-miR-1286 0 0 1
chr1:45008256|45008577 hsa-miR-1275 0 0 1
chr1:45008256|45008577 hsa-miR-1276 0 0 1
chr1:45008256|45008577 hsa-miR-1292-5p 0 0 1
chr1:45008256|45008577 hsa-miR-1292-3p 0 0 1
chr1:45008256|45008577 hsa-miR-1197 0 0 1
chr1:45008256|45008577 hsa-miR-769-5p 0 1 1
chr1:45008256|45008577 hsa-miR-199a-5p 0 0 1
chr1:45008256|45008577 hsa-miR-1184 0 0 1
chr1:45008256|45008577 hsa-miR-140-3p 0 0 1
chr1:45008256|45008577 hsa-miR-409-3p 0 0 1
chr1:45008256|45008577 hsa-miR-199b-5p 0 0 1
chr1:45008256|45008577 hsa-miR-509-3-5p 0 0 1
chr1:45008256|45008577 hsa-miR-509-5p 0 0 1
chr1:45008256|45008577 hsa-miR-590-5p 0 0 1
chr1:45008256|45008577 hsa-miR-151-5p 0 0 1
chr1:45008256|45008577 hsa-miR-1308 0 0 1
chr1:45008256|45008577 hsa-miR-644 0 0 1
chr1:45008256|45008577 hsa-miR-147 0 0 1
chr1:45008256|45008577 hsa-miR-194 0 0 1
chr1:45008256|45008577 hsa-miR-151-3p 0 0 1
chr1:45008256|45008577 hsa-miR-101 0 0 1
chr1:45008256|45008577 hsa-miR-661 1 0 0
chr1:45008256|45008577 hsa-miR-663a 1 0 0
chr1:45008256|45008577 hsa-miR-658 1 0 0
chr1:45008256|45008577 hsa-miR-1182 1 0 0
chr1:45008256|45008577 hsa-miR-3131 1 0 0
chr1:45008256|45008577 hsa-miR-3132 1 1 0
chr1:45008256|45008577 hsa-miR-4298 1 1 0
chr1:45008256|45008577 hsa-miR-4271 0 1 0
chr1:45008256|45008577 hsa-miR-4281 1 0 0
chr1:45008256|45008577 hsa-miR-4277 0 1 0
chr1:45008256|45008577 hsa-miR-3661 1 0 0
chr1:45008256|45008577 hsa-miR-4462 1 0 0
chr1:45008256|45008577 hsa-miR-4466 1 0 0
chr1:45008256|45008577 hsa-miR-4514 1 1 0
chr1:45008256|45008577 hsa-miR-4673 1 1 0
chr1:45008256|45008577 hsa-miR-4688 1 0 0
chr1:45008256|45008577 hsa-miR-4734 1 0 0
chr1:45008256|45008577 hsa-miR-4780 0 1 0
chr1:45008256|45008577 hsa-miR-6124 0 1 0
chr1:45008256|45008577 hsa-miR-7515 0 1 0
chr1:45008256|45008577 hsa-miR-211-3p 0 1 0
chr1:45008256|45008577 hsa-miR-6861-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6894-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6089 1 0 0
chr1:45008256|45008577 hsa-miR-6757-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4695-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4722-5p 1 1 0
chr1:45008256|45008577 hsa-miR-7154-3p 1 1 0
chr1:45008256|45008577 hsa-miR-3622b-5p 1 1 0
chr1:45008256|45008577 hsa-miR-197-5p 1 1 0
chr1:45008256|45008577 hsa-miR-7845-5p 1 1 0
chr1:45008256|45008577 hsa-miR-6881-5p 1 0 0
chr1:45008256|45008577 hsa-miR-2467-3p 1 0 0
chr1:45008256|45008577 hsa-miR-6815-3p 0 1 0
chr1:45008256|45008577 hsa-miR-5088-5p 1 0 0
chr1:45008256|45008577 hsa-miR-7109-5p 1 0 0
chr1:45008256|45008577 hsa-miR-1226-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4640-5p 1 0 0
chr1:45008256|45008577 hsa-miR-3127-5p 1 0 0
chr1:45008256|45008577 hsa-miR-7161-3p 0 1 0
chr1:45008256|45008577 hsa-miR-149-3p 1 0 0
chr1:45008256|45008577 hsa-miR-6824-5p 1 0 0
chr1:45008256|45008577 hsa-miR-450a-2-3p 0 1 0
chr1:45008256|45008577 hsa-miR-6825-3p 1 0 0
chr1:45008256|45008577 hsa-miR-7160-3p 0 1 0
chr1:45008256|45008577 hsa-miR-6813-3p 0 1 0
chr1:45008256|45008577 hsa-miR-6793-3p 0 1 0
chr1:45008256|45008577 hsa-miR-5000-3p 0 1 0
chr1:45008256|45008577 hsa-miR-4746-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4717-5p 1 0 0
chr1:45008256|45008577 hsa-miR-5699-5p 0 1 0
chr1:45008256|45008577 hsa-miR-4520-3p 0 1 0
chr1:45008256|45008577 hsa-miR-1233-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4763-3p 1 0 0
chr1:45008256|45008577 hsa-miR-6787-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6812-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6816-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6893-5p 1 1 0
chr1:45008256|45008577 hsa-miR-6743-5p 1 1 0
chr1:45008256|45008577 hsa-miR-6756-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6803-5p 1 0 0
chr1:45008256|45008577 hsa-miR-1249-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6722-3p 1 0 0
chr1:45008256|45008577 hsa-miR-6779-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6780a-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6797-5p 1 1 0
chr1:45008256|45008577 hsa-miR-6808-5p 0 1 0
chr1:45008256|45008577 hsa-miR-6879-5p 1 0 0
chr1:45008256|45008577 hsa-miR-7111-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4728-5p 1 0 0
chr1:45008256|45008577 hsa-miR-5196-5p 1 1 0
chr1:45008256|45008577 hsa-miR-642b-3p 1 0 0
chr1:45008256|45008577 hsa-miR-6836-5p 0 1 0
chr1:45008256|45008577 hsa-miR-4649-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4685-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6848-5p 0 1 0
chr1:45008256|45008577 hsa-miR-939-5p 1 0 0
chr1:45008256|45008577 hsa-miR-6511b-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4665-5p 0 1 0
chr1:45008256|45008577 hsa-miR-3679-5p 1 0 0
chr1:45008256|45008577 hsa-miR-4747-5p 0 1 0
chr1:45008256|45008577 hsa-miR-3184-5p 1 0 0
chr1:45008256|45008577 hsa-miR-11181-5p 1 0 0
chr1:45008256|45008577 hsa-miR-708-5p 1 0 0
chr1:45008256|45008577 hsa-miR-5588-5p 0 1 0
chr1:45008256|45008577 hsa-miR-450a-1-3p 0 1 0
chr1:45008256|45008577 hsa-miR-151a-3p 0 1 0
chr1:45008256|45008577 hsa-miR-3117-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:45008256|45008577
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MFKGQRSPQVLPFPVPLCWGVGGVTGMLNSLAAVYLPMPDSSRSSIVSCTTWYLPGTTHWA
Nucleotide Sequence CTGTTCAAGGGTCAGAGAAGCCCCCAGGTCCTGCCTTTTCCTGTCCCTTTATGTTGGGGAGTTGGGGGTGTTACAGGTATGCTAAACTCTTTAGCTGCAGTCTATCTACCCATGCCAGATTCATCAAGATCCTCGATAGTGTCCTGCACCACCTGGTACCTGCCTGGGACCACACACTGGGCA

CircID chr1:45008256|45008577
ORF Type ORF2
Protein Length 69
Nucleotide Length 210
Protein Sequence MYRRAVLLQRWLWSWTYGPFPSPNIEPCVSAWRRFPRSHSISCSRVREAPRSCLFLSLYVGELGVLQVC
Nucleotide Sequence CTGTACCGCAGAGCTGTCCTCCTGCAGAGGTGGCTGTGGTCCTGGACCTATGGGCCCTTCCCTTCCCCCAACATTGAGCCTTGTGTGTCTGCATGGAGGAGGTTCCCAAGGTCTCATAGTATAAGCTGTTCAAGGGTCAGAGAAGCCCCCAGGTCCTGCCTTTTCCTGTCCCTTTATGTTGGGGAGTTGGGGGTGTTACAGGTATGCTAA

CircID chr1:45008256|45008577
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MKYCTAELSSCRGGCGPGPMGPSLPPTLSLVCLHGGGSQGLIV
Nucleotide Sequence CTGAAGTACTGTACCGCAGAGCTGTCCTCCTGCAGAGGTGGCTGTGGTCCTGGACCTATGGGCCCTTCCCTTCCCCCAACATTGAGCCTTGTGTGTCTGCATGGAGGAGGTTCCCAAGGTCTCATAGTATAA

CircID chr1:45008256|45008577
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MLGSWGCYRYAKLFSCSLSTHARFIKILDSVLHHLVPAWDHTLG
Nucleotide Sequence ATGTTGGGGAGTTGGGGGTGTTACAGGTATGCTAAACTCTTTAGCTGCAGTCTATCTACCCATGCCAGATTCATCAAGATCCTCGATAGTGTCCTGCACCACCTGGTACCTGCCTGGGACCACACACTGGGC

CircID chr1:45008256|45008577
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MRPWEPPPCRHTRLNVGGREGPIGPGPQPPLQEDSSAVQYFRV
Nucleotide Sequence ATGAGACCTTGGGAACCTCCTCCATGCAGACACACAAGGCTCAATGTTGGGGGAAGGGAAGGGCCCATAGGTCCAGGACCACAGCCACCTCTGCAGGAGGACAGCTCTGCGGTACAGTACTTCAGGGTC

CircID chr1:45008256|45008577
ORF Type ORF6
Protein Length 48
Nucleotide Length 144
Protein Sequence MNSLYYETLGTSSMQTHKAQCWGKGRAHRSRTTATSAGGQLCGTVLQG
Nucleotide Sequence TTGAACAGCTTATACTATGAGACCTTGGGAACCTCCTCCATGCAGACACACAAGGCTCAATGTTGGGGGAAGGGAAGGGCCCATAGGTCCAGGACCACAGCCACCTCTGCAGGAGGACAGCTCTGCGGTACAGTACTTCAGGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites