CircRNA Information

General Information
circRNA Basic Information
CircID chr1:45012954|45013215
Strand +
CircType exon
Host Gene ENSG00000126088.11;
Algorism CIRI2;
Sequence CTGCAGAGTCAGTTCACAGCAGGCCTCAGGAGAGCGACACGTGCTGAAAAAGTCCTGGGCAGCCCGGGTTTCCCTAAACTCTGGTAAGTAACGGCCTGCCTGGCGCATGCACCAAACGGGAGTGTAGTCTGTTTCCTCTCCCCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:45012954|45013215 hsa-miR-370-5p 0 0 1
chr1:45012954|45013215 hsa-miR-370-3p 0 0 1
chr1:45012954|45013215 hsa-miR-345-5p 0 0 1
chr1:45012954|45013215 hsa-miR-345-3p 0 0 1
chr1:45012954|45013215 hsa-miR-561-5p 0 0 1
chr1:45012954|45013215 hsa-miR-561-3p 0 0 1
chr1:45012954|45013215 hsa-miR-577 0 0 1
chr1:45012954|45013215 hsa-miR-760 0 0 1
chr1:45012954|45013215 hsa-miR-939-5p 0 0 1
chr1:45012954|45013215 hsa-miR-939-3p 0 0 1
chr1:45012954|45013215 hsa-miR-940 0 0 1
chr1:45012954|45013215 hsa-miR-1182 1 1 1
chr1:45012954|45013215 hsa-miR-1200 0 1 1
chr1:45012954|45013215 hsa-miR-1203 0 0 1
chr1:45012954|45013215 hsa-miR-1205 0 0 1
chr1:45012954|45013215 hsa-miR-548e-5p 0 0 1
chr1:45012954|45013215 hsa-miR-548e-3p 0 0 1
chr1:45012954|45013215 hsa-miR-1299 0 1 1
chr1:45012954|45013215 hsa-miR-1225-3p 0 0 1
chr1:45012954|45013215 hsa-miR-486-3p 0 0 1
chr1:45012954|45013215 hsa-miR-146b-3p 0 0 1
chr1:45012954|45013215 hsa-miR-339-5p 0 1 1
chr1:45012954|45013215 hsa-miR-1184 0 0 1
chr1:45012954|45013215 hsa-miR-423-5p 1 1 1
chr1:45012954|45013215 hsa-miR-875-3p 0 0 1
chr1:45012954|45013215 hsa-miR-1207-5p 1 1 1
chr1:45012954|45013215 hsa-miR-548a-3p 0 0 1
chr1:45012954|45013215 hsa-miR-1233 0 0 1
chr1:45012954|45013215 hsa-miR-642 0 0 1
chr1:45012954|45013215 hsa-miR-548f 0 0 1
chr1:45012954|45013215 hsa-miR-516b 0 0 1
chr1:45012954|45013215 hsa-miR-637 1 0 0
chr1:45012954|45013215 hsa-miR-762 1 0 0
chr1:45012954|45013215 hsa-miR-1270 0 1 0
chr1:45012954|45013215 hsa-miR-3132 1 0 0
chr1:45012954|45013215 hsa-miR-3135a 1 0 0
chr1:45012954|45013215 hsa-miR-3141 1 0 0
chr1:45012954|45013215 hsa-miR-3175 0 1 0
chr1:45012954|45013215 hsa-miR-3195 1 0 0
chr1:45012954|45013215 hsa-miR-3196 1 0 0
chr1:45012954|45013215 hsa-miR-3197 1 0 0
chr1:45012954|45013215 hsa-miR-4270 1 0 0
chr1:45012954|45013215 hsa-miR-3665 1 0 0
chr1:45012954|45013215 hsa-miR-3916 0 1 0
chr1:45012954|45013215 hsa-miR-4478 0 1 0
chr1:45012954|45013215 hsa-miR-4512 0 1 0
chr1:45012954|45013215 hsa-miR-4516 1 0 0
chr1:45012954|45013215 hsa-miR-4656 1 0 0
chr1:45012954|45013215 hsa-miR-4673 0 1 0
chr1:45012954|45013215 hsa-miR-4688 1 1 0
chr1:45012954|45013215 hsa-miR-4689 1 0 0
chr1:45012954|45013215 hsa-miR-4692 0 1 0
chr1:45012954|45013215 hsa-miR-4706 1 0 0
chr1:45012954|45013215 hsa-miR-4736 1 0 0
chr1:45012954|45013215 hsa-miR-4739 1 0 0
chr1:45012954|45013215 hsa-miR-4741 1 0 0
chr1:45012954|45013215 hsa-miR-4767 1 0 0
chr1:45012954|45013215 hsa-miR-5090 1 0 0
chr1:45012954|45013215 hsa-miR-5194 1 0 0
chr1:45012954|45013215 hsa-miR-5739 1 0 0
chr1:45012954|45013215 hsa-miR-6085 1 0 0
chr1:45012954|45013215 hsa-miR-6088 1 0 0
chr1:45012954|45013215 hsa-miR-6090 1 0 0
chr1:45012954|45013215 hsa-miR-6124 1 0 0
chr1:45012954|45013215 hsa-miR-6127 1 0 0
chr1:45012954|45013215 hsa-miR-6133 1 1 0
chr1:45012954|45013215 hsa-miR-8085 0 1 0
chr1:45012954|45013215 hsa-miR-8089 1 1 0
chr1:45012954|45013215 hsa-miR-12119 1 0 0
chr1:45012954|45013215 hsa-miR-6734-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6840-3p 1 1 0
chr1:45012954|45013215 hsa-miR-6747-5p 1 0 0
chr1:45012954|45013215 hsa-miR-4726-3p 1 0 0
chr1:45012954|45013215 hsa-miR-210-3p 1 0 0
chr1:45012954|45013215 hsa-miR-7106-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6825-5p 0 1 0
chr1:45012954|45013215 hsa-miR-1233-3p 0 1 0
chr1:45012954|45013215 hsa-miR-6854-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6510-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6089 1 0 0
chr1:45012954|45013215 hsa-miR-6746-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6730-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6721-5p 1 1 0
chr1:45012954|45013215 hsa-miR-4655-5p 1 0 0
chr1:45012954|45013215 hsa-miR-197-5p 1 0 0
chr1:45012954|45013215 hsa-miR-7845-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6871-5p 1 0 0
chr1:45012954|45013215 hsa-miR-3180-3p 1 0 0
chr1:45012954|45013215 hsa-miR-6829-5p 0 1 0
chr1:45012954|45013215 hsa-miR-6732-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6798-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6760-5p 0 1 0
chr1:45012954|45013215 hsa-miR-6881-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6782-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6882-3p 1 0 0
chr1:45012954|45013215 hsa-miR-1343-3p 1 0 0
chr1:45012954|45013215 hsa-miR-6852-5p 0 1 0
chr1:45012954|45013215 hsa-miR-5088-5p 0 1 0
chr1:45012954|45013215 hsa-miR-7109-5p 1 1 0
chr1:45012954|45013215 hsa-miR-1229-5p 1 0 0
chr1:45012954|45013215 hsa-miR-4640-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6753-5p 1 1 0
chr1:45012954|45013215 hsa-miR-1228-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6771-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6501-5p 1 0 0
chr1:45012954|45013215 hsa-miR-149-3p 1 0 0
chr1:45012954|45013215 hsa-miR-937-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6824-5p 1 0 0
chr1:45012954|45013215 hsa-miR-516b-5p 0 1 0
chr1:45012954|45013215 hsa-miR-7112-5p 1 0 0
chr1:45012954|45013215 hsa-miR-3678-3p 0 1 0
chr1:45012954|45013215 hsa-miR-2276-5p 0 1 0
chr1:45012954|45013215 hsa-miR-4649-3p 0 1 0
chr1:45012954|45013215 hsa-miR-518c-5p 0 1 0
chr1:45012954|45013215 hsa-miR-6779-3p 0 1 0
chr1:45012954|45013215 hsa-miR-514a-5p 0 1 0
chr1:45012954|45013215 hsa-miR-10400-5p 1 0 0
chr1:45012954|45013215 hsa-miR-4763-3p 1 0 0
chr1:45012954|45013215 hsa-miR-6787-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6816-5p 1 1 0
chr1:45012954|45013215 hsa-miR-6870-5p 1 0 0
chr1:45012954|45013215 hsa-miR-1343-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6743-5p 1 1 0
chr1:45012954|45013215 hsa-miR-6754-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6756-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6803-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6813-5p 1 0 0
chr1:45012954|45013215 hsa-miR-1249-5p 1 1 0
chr1:45012954|45013215 hsa-miR-6722-3p 1 1 0
chr1:45012954|45013215 hsa-miR-6797-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6879-5p 1 0 0
chr1:45012954|45013215 hsa-miR-7111-5p 1 1 0
chr1:45012954|45013215 hsa-miR-4728-5p 1 1 0
chr1:45012954|45013215 hsa-miR-5196-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6780b-5p 1 0 0
chr1:45012954|45013215 hsa-miR-1909-3p 0 1 0
chr1:45012954|45013215 hsa-miR-328-5p 1 1 0
chr1:45012954|45013215 hsa-miR-4649-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6729-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6738-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6795-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6846-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6848-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6883-5p 0 1 0
chr1:45012954|45013215 hsa-miR-6887-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6889-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6885-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6731-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6856-5p 1 0 0
chr1:45012954|45013215 hsa-miR-1199-5p 0 1 0
chr1:45012954|45013215 hsa-miR-1914-3p 1 0 0
chr1:45012954|45013215 hsa-miR-4700-5p 1 1 0
chr1:45012954|45013215 hsa-miR-6750-5p 1 0 0
chr1:45012954|45013215 hsa-miR-6785-5p 0 1 0
chr1:45012954|45013215 hsa-miR-4667-5p 1 1 0
chr1:45012954|45013215 hsa-miR-3184-5p 1 0 0
chr1:45012954|45013215 hsa-miR-5009-5p 0 1 0
chr1:45012954|45013215 hsa-miR-6751-3p 0 1 0
chr1:45012954|45013215 hsa-miR-6859-5p 0 1 0
chr1:45012954|45013215 hsa-miR-4690-3p 1 0 0
chr1:45012954|45013215 hsa-miR-5699-3p 0 1 0
chr1:45012954|45013215 hsa-miR-6874-3p 1 0 0
chr1:45012954|45013215 hsa-miR-147b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:45012954|45013215
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LQSQFTAGLRRATRAEKVLGSPGFPKLW
Nucleotide Sequence CTGCAGAGTCAGTTCACAGCAGGCCTCAGGAGAGCGACACGTGCTGAAAAAGTCCTGGGCAGCCCGGGTTTCCCTAAACTCTGGTAA
CircID chr1:45012954|45013215
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQ
Nucleotide Sequence ATGCGCCAGGCAGGCCGTTACTTACCAGAGTTTAGGGAAACCCGGGCTGCCCAGGACTTTTTCAGCACGTGTCGCTCTCCTGAGGCCTGCTGTGAACTGACTCTGCAG
CircID chr1:45012954|45013215
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence LQSQFTAGLRRATRAEKVLGSPGFPKLCIQREDRAQP
Nucleotide Sequence CTGCAGAGTCAGTTCACAGCAGGCCTCAGGAGAGCGACACGTGCTGAAAAAGTCCTGGGCAGCCCGGGTTTCCCTAAACTCTGCATACAGAGGGAAGACAGGGCTCAGCCTTGA
CircID chr1:45012954|45013215
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MKKSWAARVSLNSAYRGKTGLSLEALQSPPLPLENFSPSGVLSRFPDPDSYLVSNGLPGACTKRECSLFPLPR
Nucleotide Sequence CTGAAAAAGTCCTGGGCAGCCCGGGTTTCCCTAAACTCTGCATACAGAGGGAAGACAGGGCTCAGCCTTGAGGCCCTCCAGAGCCCTCCCCTGCCCCTCGAAAACTTTTCTCCCTCCGGAGTTTTATCTAGATTTCCAGACCCTGACTCTTACCTGGTAAGTAACGGCCTGCCTGGCGCATGCACCAAACGGGAGTGTAGTCTGTTTCCTCTCCCCAGG
CircID chr1:45012954|45013215
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MHTEGRQGSALRPSRALPCPSKTFLPPEFYLDFQTLTLTW
Nucleotide Sequence CTGCATACAGAGGGAAGACAGGGCTCAGCCTTGAGGCCCTCCAGAGCCCTCCCCTGCCCCTCGAAAACTTTTCTCCCTCCGGAGTTTTATCTAGATTTCCAGACCCTGACTCTTACCTGGTAA
CircID chr1:45012954|45013215
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MSPVFPLYAEFRETRAAQDFFSTCRSPEACCELTLQ
Nucleotide Sequence CTGAGCCCTGTCTTCCCTCTGTATGCAGAGTTTAGGGAAACCCGGGCTGCCCAGGACTTTTTCAGCACGTGTCGCTCTCCTGAGGCCTGCTGTGAACTGACTCTGCAG
CircID chr1:45012954|45013215
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MSSLCMQSLGKPGLPRTFSARVALLRPAVN
Nucleotide Sequence CTGTCTTCCCTCTGTATGCAGAGTTTAGGGAAACCCGGGCTGCCCAGGACTTTTTCAGCACGTGTCGCTCTCCTGAGGCCTGCTGTGAACTGA
CircID chr1:45012954|45013215
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence LQSQFTAGLRRATRAEKVLGSPGFPKLP
Nucleotide Sequence CTGCAGAGTCAGTTCACAGCAGGCCTCAGGAGAGCGACACGTGCTGAAAAAGTCCTGGGCAGCCCGGGTTTCCCTAAACTCCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab