CircRNA Information

General Information
circRNA Basic Information
CircID chr1:45693890|45694005
Strand +
CircType exon
Host Gene ENSG00000159596.6;
Algorism CIRI2;
Sequence TTCCCAGATGGTCAGGCGGCCAGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCAGCAGCTGGGCAGAGGTGCTCCTCACTTCCCAGACTTTTATATTTTTTATACTTGACCAGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:45693890|45694005 hsa-miR-26b-5p 0 0 1
chr1:45693890|45694005 hsa-miR-26b-3p 0 0 1
chr1:45693890|45694005 hsa-miR-591 0 0 1
chr1:45693890|45694005 hsa-miR-661 1 0 1
chr1:45693890|45694005 hsa-miR-1297 0 0 1
chr1:45693890|45694005 hsa-miR-548n 0 0 1
chr1:45693890|45694005 hsa-miR-339-3p 0 1 1
chr1:45693890|45694005 hsa-miR-324-3p 0 0 1
chr1:45693890|45694005 hsa-miR-26a 0 0 1
chr1:45693890|45694005 hsa-miR-1254 0 0 1
chr1:45693890|45694005 hsa-miR-346 0 1 0
chr1:45693890|45694005 hsa-miR-1231 1 0 0
chr1:45693890|45694005 hsa-miR-1295a 1 0 0
chr1:45693890|45694005 hsa-miR-1913 1 0 0
chr1:45693890|45694005 hsa-miR-4314 0 1 0
chr1:45693890|45694005 hsa-miR-3609 0 1 0
chr1:45693890|45694005 hsa-miR-4421 1 1 0
chr1:45693890|45694005 hsa-miR-4689 0 1 0
chr1:45693890|45694005 hsa-miR-6078 0 1 0
chr1:45693890|45694005 hsa-miR-7706 1 0 0
chr1:45693890|45694005 hsa-miR-8073 1 0 0
chr1:45693890|45694005 hsa-miR-18a-3p 1 0 0
chr1:45693890|45694005 hsa-miR-6861-5p 1 0 0
chr1:45693890|45694005 hsa-miR-6825-5p 1 0 0
chr1:45693890|45694005 hsa-miR-6799-5p 0 1 0
chr1:45693890|45694005 hsa-miR-7114-5p 1 0 0
chr1:45693890|45694005 hsa-miR-3192-5p 0 1 0
chr1:45693890|45694005 hsa-miR-1301-3p 1 0 0
chr1:45693890|45694005 hsa-miR-6787-3p 1 1 0
chr1:45693890|45694005 hsa-miR-1915-5p 1 0 0
chr1:45693890|45694005 hsa-miR-6728-3p 0 1 0
chr1:45693890|45694005 hsa-miR-6882-3p 1 0 0
chr1:45693890|45694005 hsa-miR-6740-5p 1 1 0
chr1:45693890|45694005 hsa-miR-1909-5p 1 1 0
chr1:45693890|45694005 hsa-miR-204-3p 0 1 0
chr1:45693890|45694005 hsa-miR-3191-5p 1 0 0
chr1:45693890|45694005 hsa-miR-4485-5p 0 1 0
chr1:45693890|45694005 hsa-miR-1343-5p 1 0 0
chr1:45693890|45694005 hsa-miR-10401-5p 1 0 0
chr1:45693890|45694005 hsa-miR-6858-5p 0 1 0
chr1:45693890|45694005 hsa-miR-10396a-3p 1 0 0
chr1:45693890|45694005 hsa-miR-10396b-3p 1 0 0
chr1:45693890|45694005 hsa-miR-6877-3p 1 0 0
chr1:45693890|45694005 hsa-miR-4700-5p 0 1 0
chr1:45693890|45694005 hsa-miR-4646-5p 1 1 0
chr1:45693890|45694005 hsa-miR-6775-3p 1 0 0
chr1:45693890|45694005 hsa-miR-10392-3p 1 0 0
chr1:45693890|45694005 hsa-miR-3085-3p 1 0 0
chr1:45693890|45694005 hsa-miR-4690-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:45693890|45694005
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MVRRPGRGAPHFPDGAAAGQRCSSLPRLLYFLYLTR
Nucleotide Sequence ATGGTCAGGCGGCCAGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCAGCAGCTGGGCAGAGGTGCTCCTCACTTCCCAGACTTTTATATTTTTTATACTTGACCAGG

CircID chr1:45693890|45694005
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence LVKYKKYKSLGSEEHLCPAAAPSGK
Nucleotide Sequence CTGGTCAAGTATAAAAAATATAAAAGTCTGGGAAGTGAGGAGCACCTCTGCCCAGCTGCTGCCCCGTCTGGGAAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites