CircRNA Information

General Information
circRNA Basic Information
CircID chr1:46278653|46278791
Strand +
CircType exon
Host Gene ENSG00000132128.15;
Algorism CIRI2;
Sequence CCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTTTTTCTCTTTTTTCCTTCTTCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:46278653|46278791 hsa-miR-148a-5p 0 0 1
chr1:46278653|46278791 hsa-miR-148a-3p 0 0 1
chr1:46278653|46278791 hsa-miR-130a-5p 0 0 1
chr1:46278653|46278791 hsa-miR-130a-3p 0 0 1
chr1:46278653|46278791 hsa-miR-152-5p 0 0 1
chr1:46278653|46278791 hsa-miR-152-3p 0 0 1
chr1:46278653|46278791 hsa-miR-301a-5p 0 0 1
chr1:46278653|46278791 hsa-miR-301a-3p 0 0 1
chr1:46278653|46278791 hsa-miR-130b-5p 0 0 1
chr1:46278653|46278791 hsa-miR-130b-3p 0 0 1
chr1:46278653|46278791 hsa-miR-148b-5p 0 0 1
chr1:46278653|46278791 hsa-miR-148b-3p 0 0 1
chr1:46278653|46278791 hsa-miR-580-5p 0 0 1
chr1:46278653|46278791 hsa-miR-580-3p 0 0 1
chr1:46278653|46278791 hsa-miR-454-5p 0 0 1
chr1:46278653|46278791 hsa-miR-454-3p 0 0 1
chr1:46278653|46278791 hsa-miR-665 0 0 1
chr1:46278653|46278791 hsa-miR-301b-5p 0 0 1
chr1:46278653|46278791 hsa-miR-301b-3p 0 0 1
chr1:46278653|46278791 hsa-miR-1252-5p 0 0 1
chr1:46278653|46278791 hsa-miR-1252-3p 0 0 1
chr1:46278653|46278791 hsa-miR-876-3p 0 0 1
chr1:46278653|46278791 hsa-miR-582-3p 0 0 1
chr1:46278653|46278791 hsa-miR-542-3p 0 0 1
chr1:46278653|46278791 hsa-miR-323-5p 0 0 1
chr1:46278653|46278791 hsa-miR-3125 1 0 0
chr1:46278653|46278791 hsa-miR-3154 1 0 0
chr1:46278653|46278791 hsa-miR-3175 1 0 0
chr1:46278653|46278791 hsa-miR-4271 1 0 0
chr1:46278653|46278791 hsa-miR-3649 1 0 0
chr1:46278653|46278791 hsa-miR-3916 1 0 0
chr1:46278653|46278791 hsa-miR-4476 1 0 0
chr1:46278653|46278791 hsa-miR-4504 1 0 0
chr1:46278653|46278791 hsa-miR-4533 1 0 0
chr1:46278653|46278791 hsa-miR-4710 1 0 0
chr1:46278653|46278791 hsa-miR-4739 1 0 0
chr1:46278653|46278791 hsa-miR-6124 1 0 0
chr1:46278653|46278791 hsa-miR-7515 1 0 0
chr1:46278653|46278791 hsa-miR-9500 1 0 0
chr1:46278653|46278791 hsa-miR-12118 1 0 0
chr1:46278653|46278791 hsa-miR-6840-3p 1 0 0
chr1:46278653|46278791 hsa-miR-7106-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6894-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6510-5p 1 0 0
chr1:46278653|46278791 hsa-miR-1236-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6873-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6746-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6730-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6820-5p 1 0 0
chr1:46278653|46278791 hsa-miR-3190-3p 1 0 0
chr1:46278653|46278791 hsa-miR-6760-5p 1 0 0
chr1:46278653|46278791 hsa-miR-5006-5p 1 0 0
chr1:46278653|46278791 hsa-miR-149-3p 1 0 0
chr1:46278653|46278791 hsa-miR-6824-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6800-5p 1 0 0
chr1:46278653|46278791 hsa-miR-5584-5p 1 0 0
chr1:46278653|46278791 hsa-miR-2114-3p 1 0 0
chr1:46278653|46278791 hsa-miR-483-5p 1 0 0
chr1:46278653|46278791 hsa-miR-4763-3p 1 0 0
chr1:46278653|46278791 hsa-miR-6778-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6865-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6754-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6815-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6722-3p 1 0 0
chr1:46278653|46278791 hsa-miR-6780a-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6788-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6797-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6879-5p 1 0 0
chr1:46278653|46278791 hsa-miR-5196-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6780b-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6836-5p 1 0 0
chr1:46278653|46278791 hsa-miR-4649-5p 1 0 0
chr1:46278653|46278791 hsa-miR-4685-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6735-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6511a-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6739-5p 1 0 0
chr1:46278653|46278791 hsa-miR-4747-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6891-5p 1 0 0
chr1:46278653|46278791 hsa-miR-6837-5p 1 0 0
chr1:46278653|46278791 hsa-miR-4690-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:46278653|46278791
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPVCWASSRPPGPQCKGRRKKEKKGDRKRKIELVVG
Nucleotide Sequence ATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGAAGAAGGAAAAAAGAGAAAAAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGG
CircID chr1:46278653|46278791
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MFAGPHQGLQDLSAREEGKKRKKVTERER
Nucleotide Sequence CTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGAAGAAGGAAAAAAGAGAAAAAAGGTGACAGAAAGAGAAAGATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab