CircNet

General Information

circRNA Basic Information

CircID	chr1:46344801\|46347075
Strand	+
CircType	exon
Host Gene	ENSG00000117481.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTGGCTTTGCAGAATTTTGACATGACTTACAGTGTGCAGTTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGGTAGGATCTGGAGCCATGACTGGAGCGGTCCTGAGTGTCTGCTGGAAGTAGACATGTTGAGACCCAGCTTCTACCCTCTGTAATAAGGACCATAATATTGCTAATATTTATGGCATGTTTATACAGACTAGGCATTTTTTTGAGGTGCTGTACATATGTTATCTCTTTTTGTTCTGTCAGCAGCCTTATGAAGTAGGTAATATTATTGCTGTTTTACATTTGGAGAAACTACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTGCAGCCTGGGGACATCGTGCTTGACCTATGTGCAGCTCCTGGGGGAAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:46344801\|46347075	hsa-miR-212-5p	0	1	1
chr1:46344801\|46347075	hsa-miR-138-1-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:46344801\|46347075
ORF Type	ORF1
Protein Length	107
Nucleotide Length	321
Protein Sequence	MPSLYKHAINISNIMVLITEGRSWVSTCLLPADTQDRSSHGSRSYLAGGKRLISPLSKVKHRRFGLQAQEAGDGAADWPPSDCSSQWEMASFTKSLALSCSSLALT*
Nucleotide Sequence	ATGCCTAGTCTGTATAAACATGCCATAAATATTAGCAATATTATGGTCCTTATTACAGAGGGTAGAAGCTGGGTCTCAACATGTCTACTTCCAGCAGACACTCAGGACCGCTCCAGTCATGGCTCCAGATCCTACCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGGGATGGGGCTGCAGATTGGCCACCCTCAGACTGCAGTTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAGCACTTACATGA

CircID	chr1:46344801\|46347075
ORF Type	ORF2
Protein Length	98
Nucleotide Length	294
Protein Sequence	MTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPAR*
Nucleotide Sequence	ATGACTTACAGTGTGCAGTTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGGTAG

CircID	chr1:46344801\|46347075
ORF Type	ORF3
Protein Length	96
Nucleotide Length	288
Protein Sequence	MSTSSRHSGPLQSWLQILPGRREATDIPSVKSEASKVRTAGPGGRGWGCRLATLRLQFPVGDGFIHKILGTQLLQLSTYMIPGSKVIDQCTILLL*
Nucleotide Sequence	ATGTCTACTTCCAGCAGACACTCAGGACCGCTCCAGTCATGGCTCCAGATCCTACCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGGGATGGGGCTGCAGATTGGCCACCCTCAGACTGCAGTTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAGCACTTACATGATCCCAGGCAGCAAAGTTATTGACCAGTGCACCATACTTCTGCTCTGA

CircID	chr1:46344801\|46347075
ORF Type	ORF4
Protein Length	90
Nucleotide Length	270
Protein Sequence	MFIQTRHFFEVLYICYLFLFCQQPYEVGNIIAVLHLEKLPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC
Nucleotide Sequence	ATGTTTATACAGACTAGGCATTTTTTTGAGGTGCTGTACATATGTTATCTCTTTTTGTTCTGTCAGCAGCCTTATGAAGTAGGTAATATTATTGCTGTTTTACATTTGGAGAAACTACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTGCAGCCTGGGGACATCGTGCTTGACCTATGTGCAGCTCCTGGGGGAAAGACACTAGCGTTGCTTCAGACTGGCTGTTGC

CircID	chr1:46344801\|46347075
ORF Type	ORF5
Protein Length	74
Nucleotide Length	222
Protein Sequence	MKPSPTGNCSLRVANLQPHPLPPGPAVRTFDASLLTEGISVASLLPGRIWSHDWSGPECLLEVDMLRPSFYPL*
Nucleotide Sequence	ATGAAGCCATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGGTAGGATCTGGAGCCATGACTGGAGCGGTCCTGAGTGTCTGCTGGAAGTAGACATGTTGAGACCCAGCTTCTACCCTCTGTAA

CircID	chr1:46344801\|46347075
ORF Type	ORF6
Protein Length	31
Nucleotide Length	93
Protein Sequence	MGLQIGHPQTAVPSGRWLHSQNPWHSAAPA*
Nucleotide Sequence	ATGGGGCTGCAGATTGGCCACCCTCAGACTGCAGTTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAG

CircID	chr1:46344801\|46347075
ORF Type	ORF7
Protein Length	31
Nucleotide Length	93
Protein Sequence	MLPPCCLFWPSACSLGTSCLTYVQLLGERH*
Nucleotide Sequence	ATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTGCAGCCTGGGGACATCGTGCTTGACCTATGTGCAGCTCCTGGGGGAAAGACACTAG

CircID	chr1:46344801\|46347075
ORF Type	ORF8
Protein Length	30
Nucleotide Length	90
Protein Sequence	MAKDLQTAHCKSCQNSAKPVEQQGIWALWQ
Nucleotide Sequence	ATGGCCAAAGATCTCCAAACTGCACACTGTAAGTCATGTCAAAATTCTGCAAAGCCAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:46344801\|46347075	NOP56	1	0	1
chr1:46344801\|46347075	ELAVL1	0	4	2
chr1:46344801\|46347075	ZNF184	1	0	0
chr1:46344801\|46347075	CELF2	0	1	0
chr1:46344801\|46347075	PRPF8	1	3	5
chr1:46344801\|46347075	UPF1	0	1	0
chr1:46344801\|46347075	TNRC6A	0	0	1
chr1:46344801\|46347075	FMR1	0	0	5
chr1:46344801\|46347075	CPSF6	0	0	1
chr1:46344801\|46347075	TIA1	0	1	0
chr1:46344801\|46347075	TROVE2	0	1	1
chr1:46344801\|46347075	FUS	2	0	0
chr1:46344801\|46347075	DGCR8	0	1	1
chr1:46344801\|46347075	SRSF7	0	1	2
chr1:46344801\|46347075	SRSF1	0	1	11
chr1:46344801\|46347075	NOP58	1	1	2
chr1:46344801\|46347075	SRSF3	0	1	0
chr1:46344801\|46347075	RBM27	0	0	2
chr1:46344801\|46347075	NONO	0	0	1
chr1:46344801\|46347075	ADAR	1	0	0
chr1:46344801\|46347075	U2AF2	7	2	6
chr1:46344801\|46347075	SRSF9	0	0	4
chr1:46344801\|46347075	LSM11	0	1	2
chr1:46344801\|46347075	HNRNPK	2	0	0
chr1:46344801\|46347075	PCBP2	1	0	0
chr1:46344801\|46347075	HNRNPA2B1	0	4	0
chr1:46344801\|46347075	PTBP1	1	3	0
chr1:46344801\|46347075	HNRNPC	0	1	0
chr1:46344801\|46347075	TRA2A	0	0	2
chr1:46344801\|46347075	HNRNPM	0	2	0
chr1:46344801\|46347075	DHX9	1	2	1
chr1:46344801\|46347075	RBFOX2	3	1	0
chr1:46344801\|46347075	DDX3X	2	0	2
chr1:46344801\|46347075	SMNDC1	0	0	3
chr1:46344801\|46347075	HNRNPA1	0	2	1
chr1:46344801\|46347075	LIN28B	0	1	6
chr1:46344801\|46347075	RANGAP1	0	0	2
chr1:46344801\|46347075	FTO	0	1	0
chr1:46344801\|46347075	FXR1	0	0	4
chr1:46344801\|46347075	FXR2	0	0	3
chr1:46344801\|46347075	SND1	0	0	3
chr1:46344801\|46347075	IGF2BP1	0	0	1
chr1:46344801\|46347075	BUD13	1	1	3
chr1:46344801\|46347075	IGF2BP2	0	2	5
chr1:46344801\|46347075	NPM1	0	0	1
chr1:46344801\|46347075	HNRNPUL1	0	0	1
chr1:46344801\|46347075	TARDBP	1	0	1
chr1:46344801\|46347075	YTHDC1	2	0	0
chr1:46344801\|46347075	TAF15	0	3	1
chr1:46344801\|46347075	FBL	0	2	4
chr1:46344801\|46347075	DICER1	0	0	1
chr1:46344801\|46347075	KHSRP	0	4	2
chr1:46344801\|46347075	CNBP	0	0	1
chr1:46344801\|46347075	SLTM	3	0	4
chr1:46344801\|46347075	EIF4G2	0	0	1
chr1:46344801\|46347075	CSTF2T	2	0	2
chr1:46344801\|46347075	SAFB2	2	0	0
chr1:46344801\|46347075	U2AF1	4	1	4
chr1:46344801\|46347075	RBM22	0	0	1
chr1:46344801\|46347075	ILF3	0	7	0
chr1:46344801\|46347075	XRN2	0	1	1
chr1:46344801\|46347075	DKC1	1	0	0
chr1:46344801\|46347075	ALKBH5	0	0	1
chr1:46344801\|46347075	EIF4A3	3	4	8
chr1:46344801\|46347075	AGO2	0	0	1

CircRNA Information