CircRNA Information

General Information
circRNA Basic Information
CircID chr1:46413596|46413728
Strand -
CircType exon
Host Gene ENSG00000117480.14;
Algorism CIRI2;
Sequence CTGAGACTCACACTCTCTGCAGCCCAGCCTAGTCAGGGCACAGCTGCCCTGCTGCCACAGCAAGGAAATGTCCTGCATGGGGCAGAGGCTTCCGTGTCCTCTCCCCCAACCCCCTGCAAGAAGCGCCGACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:46413596|46413728 hsa-miR-214-5p 0 0 1
chr1:46413596|46413728 hsa-miR-214-3p 0 0 1
chr1:46413596|46413728 hsa-miR-625-5p 0 0 1
chr1:46413596|46413728 hsa-miR-625-3p 0 0 1
chr1:46413596|46413728 hsa-miR-627-5p 0 0 1
chr1:46413596|46413728 hsa-miR-627-3p 0 0 1
chr1:46413596|46413728 hsa-miR-645 0 1 1
chr1:46413596|46413728 hsa-miR-874-5p 0 0 1
chr1:46413596|46413728 hsa-miR-874-3p 0 0 1
chr1:46413596|46413728 hsa-miR-924 0 0 1
chr1:46413596|46413728 hsa-miR-1286 0 0 1
chr1:46413596|46413728 hsa-miR-1275 1 1 1
chr1:46413596|46413728 hsa-miR-1197 0 0 1
chr1:46413596|46413728 hsa-miR-671-5p 0 0 1
chr1:46413596|46413728 hsa-miR-885-3p 1 0 1
chr1:46413596|46413728 hsa-miR-146b-3p 0 0 1
chr1:46413596|46413728 hsa-miR-574-5p 0 0 1
chr1:46413596|46413728 hsa-miR-502-5p 0 0 1
chr1:46413596|46413728 hsa-miR-324-3p 0 0 1
chr1:46413596|46413728 hsa-miR-604 1 0 0
chr1:46413596|46413728 hsa-miR-612 1 0 0
chr1:46413596|46413728 hsa-miR-762 1 0 0
chr1:46413596|46413728 hsa-miR-761 0 1 0
chr1:46413596|46413728 hsa-miR-936 1 0 0
chr1:46413596|46413728 hsa-miR-1469 1 0 0
chr1:46413596|46413728 hsa-miR-3135a 1 0 0
chr1:46413596|46413728 hsa-miR-3147 1 1 0
chr1:46413596|46413728 hsa-miR-3175 0 1 0
chr1:46413596|46413728 hsa-miR-4270 1 0 0
chr1:46413596|46413728 hsa-miR-4278 1 0 0
chr1:46413596|46413728 hsa-miR-3652 1 0 0
chr1:46413596|46413728 hsa-miR-4430 1 0 0
chr1:46413596|46413728 hsa-miR-4462 0 1 0
chr1:46413596|46413728 hsa-miR-4478 1 0 0
chr1:46413596|46413728 hsa-miR-4492 1 0 0
chr1:46413596|46413728 hsa-miR-4498 1 0 0
chr1:46413596|46413728 hsa-miR-4505 1 1 0
chr1:46413596|46413728 hsa-miR-4507 1 0 0
chr1:46413596|46413728 hsa-miR-4508 1 0 0
chr1:46413596|46413728 hsa-miR-1587 1 0 0
chr1:46413596|46413728 hsa-miR-4651 1 0 0
chr1:46413596|46413728 hsa-miR-4656 1 0 0
chr1:46413596|46413728 hsa-miR-4706 1 0 0
chr1:46413596|46413728 hsa-miR-4741 1 0 0
chr1:46413596|46413728 hsa-miR-4785 1 1 0
chr1:46413596|46413728 hsa-miR-5787 1 1 0
chr1:46413596|46413728 hsa-miR-6086 1 0 0
chr1:46413596|46413728 hsa-miR-6860 1 0 0
chr1:46413596|46413728 hsa-miR-7150 1 0 0
chr1:46413596|46413728 hsa-miR-8085 1 0 0
chr1:46413596|46413728 hsa-miR-4731-5p 1 0 0
chr1:46413596|46413728 hsa-miR-4687-3p 1 0 0
chr1:46413596|46413728 hsa-miR-6510-5p 1 0 0
chr1:46413596|46413728 hsa-miR-4722-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6820-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6741-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6762-3p 1 0 0
chr1:46413596|46413728 hsa-miR-6727-5p 1 0 0
chr1:46413596|46413728 hsa-miR-3180-3p 1 0 0
chr1:46413596|46413728 hsa-miR-6829-5p 1 1 0
chr1:46413596|46413728 hsa-miR-6732-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6798-5p 1 1 0
chr1:46413596|46413728 hsa-miR-2467-3p 0 1 0
chr1:46413596|46413728 hsa-miR-7109-3p 0 1 0
chr1:46413596|46413728 hsa-miR-7109-5p 1 0 0
chr1:46413596|46413728 hsa-miR-1228-5p 1 0 0
chr1:46413596|46413728 hsa-miR-296-3p 1 0 0
chr1:46413596|46413728 hsa-miR-4690-5p 1 0 0
chr1:46413596|46413728 hsa-miR-149-3p 1 0 0
chr1:46413596|46413728 hsa-miR-3158-5p 1 1 0
chr1:46413596|46413728 hsa-miR-1250-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6889-3p 0 1 0
chr1:46413596|46413728 hsa-miR-5000-3p 0 1 0
chr1:46413596|46413728 hsa-miR-4746-3p 1 0 0
chr1:46413596|46413728 hsa-miR-937-3p 1 0 0
chr1:46413596|46413728 hsa-miR-5004-5p 0 1 0
chr1:46413596|46413728 hsa-miR-1207-5p 1 1 0
chr1:46413596|46413728 hsa-miR-4763-3p 1 0 0
chr1:46413596|46413728 hsa-miR-6787-5p 1 0 0
chr1:46413596|46413728 hsa-miR-5001-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6752-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6756-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6803-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6815-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6819-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6842-5p 1 0 0
chr1:46413596|46413728 hsa-miR-7110-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6722-3p 1 1 0
chr1:46413596|46413728 hsa-miR-6751-5p 1 0 0
chr1:46413596|46413728 hsa-miR-7111-5p 1 1 0
chr1:46413596|46413728 hsa-miR-3620-5p 1 1 0
chr1:46413596|46413728 hsa-miR-6836-5p 1 1 0
chr1:46413596|46413728 hsa-miR-10396b-5p 1 0 0
chr1:46413596|46413728 hsa-miR-1909-3p 1 0 0
chr1:46413596|46413728 hsa-miR-328-5p 1 0 0
chr1:46413596|46413728 hsa-miR-4632-5p 0 1 0
chr1:46413596|46413728 hsa-miR-675-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6794-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6846-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6848-5p 1 0 0
chr1:46413596|46413728 hsa-miR-939-5p 1 0 0
chr1:46413596|46413728 hsa-miR-365b-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6511b-5p 1 0 0
chr1:46413596|46413728 hsa-miR-3940-5p 1 0 0
chr1:46413596|46413728 hsa-miR-6855-5p 0 1 0
chr1:46413596|46413728 hsa-miR-6877-3p 0 1 0
chr1:46413596|46413728 hsa-miR-4716-3p 1 0 0
chr1:46413596|46413728 hsa-miR-6819-3p 0 1 0
chr1:46413596|46413728 hsa-miR-3619-5p 0 1 0
chr1:46413596|46413728 hsa-miR-135a-2-3p 1 0 0
chr1:46413596|46413728 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:46413596|46413728
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence LRLTLSAAQPSQGTAALLPQQGNVLHGAEASVSSPPTPCKKRRL
Nucleotide Sequence CTGAGACTCACACTCTCTGCAGCCCAGCCTAGTCAGGGCACAGCTGCCCTGCTGCCACAGCAAGGAAATGTCCTGCATGGGGCAGAGGCTTCCGTGTCCTCTCCCCCAACCCCCTGCAAGAAGCGCCGACTC

CircID chr1:46413596|46413728
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MQPSLVRAQLPCCHSKEMSCMGQRLPCPLPQPPARSADS
Nucleotide Sequence CTGCAGCCCAGCCTAGTCAGGGCACAGCTGCCCTGCTGCCACAGCAAGGAAATGTCCTGCATGGGGCAGAGGCTTCCGTGTCCTCTCCCCCAACCCCCTGCAAGAAGCGCCGACTCC

CircID chr1:46413596|46413728
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MGERTRKPLPHAGHFLAVAAGQLCPD
Nucleotide Sequence TTGGGGGAGAGGACACGGAAGCCTCTGCCCCATGCAGGACATTTCCTTGCTGTGGCAGCAGGGCAGCTGTGCCCTGACTAG

CircID chr1:46413596|46413728
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MQDISLLWQQGSCALTRLGCRECESQ
Nucleotide Sequence ATGCAGGACATTTCCTTGCTGTGGCAGCAGGGCAGCTGTGCCCTGACTAGGCTGGGCTGCAGAGAGTGTGAGTCTCAG

CircID chr1:46413596|46413728
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MQGVGGEDTEASAPCRTFPCCGSRAAVP
Nucleotide Sequence TTGCAGGGGGTTGGGGGAGAGGACACGGAAGCCTCTGCCCCATGCAGGACATTTCCTTGCTGTGGCAGCAGGGCAGCTGTGCCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites