CircRNA Information

General Information
circRNA Basic Information
CircID chr1:46633541|46633755
Strand -
CircType exon
Host Gene ENSG00000123472.11;
Algorism CIRI2;
Sequence ACCATGCTAGCACCAGGGGACAAATTTACTGATTAAATGGTACAATTTTCTTTGAGTTCTTTGCCAGATCTTTCTAGGTAAATAAATATAAAGAACAGCTACGTGGTACTTTAGTCATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:46633541|46633755 hsa-miR-559 0 0 1
chr1:46633541|46633755 hsa-miR-621 0 0 1
chr1:46633541|46633755 hsa-miR-888-5p 0 0 1
chr1:46633541|46633755 hsa-miR-888-3p 0 0 1
chr1:46633541|46633755 hsa-miR-548j-5p 0 0 1
chr1:46633541|46633755 hsa-miR-548j-3p 0 0 1
chr1:46633541|46633755 hsa-miR-1290 0 0 1
chr1:46633541|46633755 hsa-miR-548k 0 0 1
chr1:46633541|46633755 hsa-miR-548l 0 0 1
chr1:46633541|46633755 hsa-miR-1261 0 0 1
chr1:46633541|46633755 hsa-miR-1265 0 0 1
chr1:46633541|46633755 hsa-miR-491-5p 0 0 1
chr1:46633541|46633755 hsa-miR-486-3p 0 0 1
chr1:46633541|46633755 hsa-miR-490-5p 0 0 1
chr1:46633541|46633755 hsa-miR-331-3p 0 1 1
chr1:46633541|46633755 hsa-miR-455-3p 0 0 1
chr1:46633541|46633755 hsa-miR-513a-3p 0 0 1
chr1:46633541|46633755 hsa-miR-548b-5p 0 0 1
chr1:46633541|46633755 hsa-miR-548d-5p 0 0 1
chr1:46633541|46633755 hsa-miR-876-5p 0 0 1
chr1:46633541|46633755 hsa-miR-548c-5p 0 0 1
chr1:46633541|46633755 hsa-miR-548a-5p 0 0 1
chr1:46633541|46633755 hsa-miR-548i 0 0 1
chr1:46633541|46633755 hsa-miR-644 0 0 1
chr1:46633541|46633755 hsa-miR-147 0 0 1
chr1:46633541|46633755 hsa-miR-548h 0 0 1
chr1:46633541|46633755 hsa-miR-325 1 0 0
chr1:46633541|46633755 hsa-miR-5697 0 1 0
chr1:46633541|46633755 hsa-miR-378j 0 1 0
chr1:46633541|46633755 hsa-miR-6809-5p 0 1 0
chr1:46633541|46633755 hsa-miR-6742-5p 1 0 0
chr1:46633541|46633755 hsa-miR-3156-5p 0 1 0
chr1:46633541|46633755 hsa-miR-5004-3p 0 1 0
chr1:46633541|46633755 hsa-miR-619-3p 0 1 0
chr1:46633541|46633755 hsa-miR-4795-5p 0 1 0
chr1:46633541|46633755 hsa-miR-335-3p 0 1 0
chr1:46633541|46633755 hsa-miR-624-5p 0 1 0
chr1:46633541|46633755 hsa-miR-6839-3p 0 1 0
chr1:46633541|46633755 hsa-miR-4639-5p 0 1 0
chr1:46633541|46633755 hsa-miR-1233-5p 1 0 0
chr1:46633541|46633755 hsa-miR-6775-5p 1 0 0
chr1:46633541|46633755 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:46633541|46633755
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MPHTFIHGHILLGSWGLRTNPGGMIKTNGHFLL
Nucleotide Sequence ATGCCCCACACATTTATCCATGGACACATCCTACTTGGCAGTTGGGGACTGAGGACAAATCCAGGAGGAATGATTAAAACGAATGGCCACTTCTTACTC

CircID chr1:46633541|46633755
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MPSRMCPWINVWGMTKVPRSCSLYLFT
Nucleotide Sequence CTGCCAAGTAGGATGTGTCCATGGATAAATGTGTGGGGCATGACTAAAGTACCACGTAGCTGTTCTTTATATTTATTTACCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites