CircNet

General Information

circRNA Basic Information

CircID	chr1:51818066\|51825382
Strand	-
CircType	exon
Host Gene	ENSG00000078618.20;
Algorism	find_circ;CIRI2;DCC;
Sequence	AATATCAACTTGCAAGGCCTTCTGATGCAAACAGAAAGGAAATGTTGTTTGGAAGCCTTGCTAGACCTGGACATCCTATGGGAAAATTTTTTTGGGGAAATGCTGAGACGCTCAAGCATGAGCCAAGAAAGAATAATATTGATACACATGCTAGATTGAGAGAATTCTGGATGCGTTACTACTCTTCTCATTACATGACTTTAGTGGTTCAATCCAAAGAAACACTGGATACTTTGGAAAAGTGGGTGACTGAAATCTTCTCTCAGATACCAAACAATGGGTTACCCAGACCAAACTTTGGCCATTTAACGGATCCATTTGACACACCAGCATTTAACAAACTTTATAGAGTTGTTCCAATCAGAAAAATTCATGCTCTGACCATCACATGGGCACTTCCTCCTCAACAGCAACATTACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:51818066\|51825382	hsa-miR-127-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:51818066\|51825382
ORF Type	ORF1
Protein Length	126
Nucleotide Length	378
Protein Sequence	MLFGSLARPGHPMGKFFWGNAETLKHEPRKNNIDTHARLREFWMRYYSSHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPRPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHY
Nucleotide Sequence	ATGTTGTTTGGAAGCCTTGCTAGACCTGGACATCCTATGGGAAAATTTTTTTGGGGAAATGCTGAGACGCTCAAGCATGAGCCAAGAAAGAATAATATTGATACACATGCTAGATTGAGAGAATTCTGGATGCGTTACTACTCTTCTCATTACATGACTTTAGTGGTTCAATCCAAAGAAACACTGGATACTTTGGAAAAGTGGGTGACTGAAATCTTCTCTCAGATACCAAACAATGGGTTACCCAGACCAAACTTTGGCCATTTAACGGATCCATTTGACACACCAGCATTTAACAAACTTTATAGAGTTGTTCCAATCAGAAAAATTCATGCTCTGACCATCACATGGGCACTTCCTCCTCAACAGCAACATTAC

CircID	chr1:51818066\|51825382
ORF Type	ORF2
Protein Length	63
Nucleotide Length	189
Protein Sequence	MRRVVTHPEFSQSSMCINIILSWLMLERLSISPKKFSHRMSRSSKASKQHFLSVCIRRPCKLI
Nucleotide Sequence	ATGAGAAGAGTAGTAACGCATCCAGAATTCTCTCAATCTAGCATGTGTATCAATATTATTCTTTCTTGGCTCATGCTTGAGCGTCTCAGCATTTCCCCAAAAAAATTTTCCCATAGGATGTCCAGGTCTAGCAAGGCTTCCAAACAACATTTCCTTTCTGTTTGCATCAGAAGGCCTTGCAAGTTGATA

CircID	chr1:51818066\|51825382
ORF Type	ORF3
Protein Length	61
Nucleotide Length	183
Protein Sequence	MLVCQMDPLNGQSLVWVTHCLVSERRFQSPTFPKYPVFLWIEPLKSCNEKSSNASRILSI*
Nucleotide Sequence	ATGCTGGTGTGTCAAATGGATCCGTTAAATGGCCAAAGTTTGGTCTGGGTAACCCATTGTTTGGTATCTGAGAGAAGATTTCAGTCACCCACTTTTCCAAAGTATCCAGTGTTTCTTTGGATTGAACCACTAAAGTCATGTAATGAGAAGAGTAGTAACGCATCCAGAATTCTCTCAATCTAG

CircID	chr1:51818066\|51825382
ORF Type	ORF4
Protein Length	45
Nucleotide Length	135
Protein Sequence	MQTERKCCLEALLDLDILWENFFGEMLRRSSMSQERIILIHMLD*
Nucleotide Sequence	ATGCAAACAGAAAGGAAATGTTGTTTGGAAGCCTTGCTAGACCTGGACATCCTATGGGAAAATTTTTTTGGGGAAATGCTGAGACGCTCAAGCATGAGCCAAGAAAGAATAATATTGATACACATGCTAGATTGA

CircID	chr1:51818066\|51825382
ORF Type	ORF5
Protein Length	37
Nucleotide Length	111
Protein Sequence	MLLLRRKCPCDGQSMNFSDWNNSIKFVKCWCVKWIR*
Nucleotide Sequence	ATGTTGCTGTTGAGGAGGAAGTGCCCATGTGATGGTCAGAGCATGAATTTTTCTGATTGGAACAACTCTATAAAGTTTGTTAAATGCTGGTGTGTCAAATGGATCCGTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:51818066\|51825382	NOP56	0	2	0
chr1:51818066\|51825382	MOV10	0	0	1
chr1:51818066\|51825382	ELAVL1	3	1	3
chr1:51818066\|51825382	CELF2	1	0	0
chr1:51818066\|51825382	PRPF8	0	1	1
chr1:51818066\|51825382	UPF1	1	0	0
chr1:51818066\|51825382	TAF15	1	0	0
chr1:51818066\|51825382	FMR1	0	1	3
chr1:51818066\|51825382	NUDT21	0	1	0
chr1:51818066\|51825382	CSTF2	0	1	0
chr1:51818066\|51825382	FUS	0	2	1
chr1:51818066\|51825382	DGCR8	0	0	1
chr1:51818066\|51825382	SRSF1	0	0	1
chr1:51818066\|51825382	NOP58	0	2	4
chr1:51818066\|51825382	SRSF3	1	0	0
chr1:51818066\|51825382	U2AF2	11	5	5
chr1:51818066\|51825382	SRSF9	0	1	0
chr1:51818066\|51825382	DDX54	0	2	10
chr1:51818066\|51825382	PTBP1	0	0	2
chr1:51818066\|51825382	HNRNPC	5	2	0
chr1:51818066\|51825382	HNRNPD	2	2	0
chr1:51818066\|51825382	YWHAG	0	0	1
chr1:51818066\|51825382	HNRNPA1	0	2	0
chr1:51818066\|51825382	DDX3X	0	0	1
chr1:51818066\|51825382	ACIN1	0	0	3
chr1:51818066\|51825382	FXR1	0	0	8
chr1:51818066\|51825382	FXR2	0	1	4
chr1:51818066\|51825382	SND1	0	0	1
chr1:51818066\|51825382	IGF2BP1	0	4	8
chr1:51818066\|51825382	IGF2BP3	0	1	4
chr1:51818066\|51825382	IGF2BP2	2	1	13
chr1:51818066\|51825382	TARDBP	0	1	0
chr1:51818066\|51825382	BUD13	0	0	1
chr1:51818066\|51825382	RBM47	0	1	3
chr1:51818066\|51825382	EIF4G2	0	0	2
chr1:51818066\|51825382	CSTF2T	0	1	1
chr1:51818066\|51825382	TRA2A	0	0	1
chr1:51818066\|51825382	ZFP36	1	0	0
chr1:51818066\|51825382	FBL	0	1	4
chr1:51818066\|51825382	EWSR1	0	1	0
chr1:51818066\|51825382	EIF4A3	2	1	9
chr1:51818066\|51825382	AGO2	0	0	5

CircRNA Information