CircRNA Information

General Information
circRNA Basic Information
CircID chr1:52431149|52431279
Strand +
CircType exon
Host Gene ENSG00000134744.12;
Algorism CIRI2;
Sequence CAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGCCAATGCACCCTCTCCAGATCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCCCAGCAATATTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:52431149|52431279 hsa-miR-33a-5p 0 0 1
chr1:52431149|52431279 hsa-miR-33a-3p 0 0 1
chr1:52431149|52431279 hsa-miR-182-5p 0 0 1
chr1:52431149|52431279 hsa-miR-182-3p 0 0 1
chr1:52431149|52431279 hsa-miR-200b-5p 0 0 1
chr1:52431149|52431279 hsa-miR-200b-3p 0 0 1
chr1:52431149|52431279 hsa-miR-137-5p 0 0 1
chr1:52431149|52431279 hsa-miR-137-3p 0 0 1
chr1:52431149|52431279 hsa-miR-185-5p 0 0 1
chr1:52431149|52431279 hsa-miR-185-3p 0 0 1
chr1:52431149|52431279 hsa-miR-200c-5p 0 0 1
chr1:52431149|52431279 hsa-miR-200c-3p 0 0 1
chr1:52431149|52431279 hsa-miR-429 0 0 1
chr1:52431149|52431279 hsa-miR-558 0 0 1
chr1:52431149|52431279 hsa-miR-33b-5p 0 0 1
chr1:52431149|52431279 hsa-miR-33b-3p 0 0 1
chr1:52431149|52431279 hsa-miR-637 1 0 1
chr1:52431149|52431279 hsa-miR-661 0 0 1
chr1:52431149|52431279 hsa-miR-1279 0 0 1
chr1:52431149|52431279 hsa-miR-486-3p 0 0 1
chr1:52431149|52431279 hsa-miR-490-5p 0 0 1
chr1:52431149|52431279 hsa-miR-1207-5p 1 0 1
chr1:52431149|52431279 hsa-miR-516b 0 0 1
chr1:52431149|52431279 hsa-miR-1254 0 0 1
chr1:52431149|52431279 hsa-miR-612 1 0 0
chr1:52431149|52431279 hsa-miR-638 1 0 0
chr1:52431149|52431279 hsa-miR-663a 1 0 0
chr1:52431149|52431279 hsa-miR-762 1 0 0
chr1:52431149|52431279 hsa-miR-1268a 1 0 0
chr1:52431149|52431279 hsa-miR-2861 1 0 0
chr1:52431149|52431279 hsa-miR-3141 1 0 0
chr1:52431149|52431279 hsa-miR-3178 1 0 0
chr1:52431149|52431279 hsa-miR-3196 1 0 0
chr1:52431149|52431279 hsa-miR-4298 1 0 0
chr1:52431149|52431279 hsa-miR-4260 1 0 0
chr1:52431149|52431279 hsa-miR-4270 1 0 0
chr1:52431149|52431279 hsa-miR-3911 1 0 0
chr1:52431149|52431279 hsa-miR-1268b 1 0 0
chr1:52431149|52431279 hsa-miR-4466 1 0 0
chr1:52431149|52431279 hsa-miR-4488 1 0 0
chr1:52431149|52431279 hsa-miR-4505 1 0 0
chr1:52431149|52431279 hsa-miR-2392 1 0 0
chr1:52431149|52431279 hsa-miR-4651 1 0 0
chr1:52431149|52431279 hsa-miR-4688 1 0 0
chr1:52431149|52431279 hsa-miR-4706 1 0 0
chr1:52431149|52431279 hsa-miR-4734 1 0 0
chr1:52431149|52431279 hsa-miR-4736 1 0 0
chr1:52431149|52431279 hsa-miR-4767 1 0 0
chr1:52431149|52431279 hsa-miR-5090 1 0 0
chr1:52431149|52431279 hsa-miR-5192 1 0 0
chr1:52431149|52431279 hsa-miR-5787 1 0 0
chr1:52431149|52431279 hsa-miR-6132 1 0 0
chr1:52431149|52431279 hsa-miR-6860 1 0 0
chr1:52431149|52431279 hsa-miR-7150 1 0 0
chr1:52431149|52431279 hsa-miR-8072 1 0 0
chr1:52431149|52431279 hsa-miR-8089 1 0 0
chr1:52431149|52431279 hsa-miR-12131 1 0 0
chr1:52431149|52431279 hsa-miR-211-3p 1 0 0
chr1:52431149|52431279 hsa-miR-135a-3p 1 0 0
chr1:52431149|52431279 hsa-miR-4433b-3p 1 0 0
chr1:52431149|52431279 hsa-miR-92a-1-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4731-5p 1 0 0
chr1:52431149|52431279 hsa-miR-7155-5p 1 0 0
chr1:52431149|52431279 hsa-miR-125b-1-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6757-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6890-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6727-5p 1 0 0
chr1:52431149|52431279 hsa-miR-3622b-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6759-5p 1 0 0
chr1:52431149|52431279 hsa-miR-3187-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6721-5p 1 0 0
chr1:52431149|52431279 hsa-miR-197-5p 1 0 0
chr1:52431149|52431279 hsa-miR-5589-5p 1 0 0
chr1:52431149|52431279 hsa-miR-3180-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6748-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6881-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6782-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6821-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1226-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1229-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4640-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6753-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1908-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1228-5p 1 0 0
chr1:52431149|52431279 hsa-miR-92b-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4787-5p 1 0 0
chr1:52431149|52431279 hsa-miR-149-3p 1 0 0
chr1:52431149|52431279 hsa-miR-937-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4776-5p 1 0 0
chr1:52431149|52431279 hsa-miR-7112-5p 1 0 0
chr1:52431149|52431279 hsa-miR-423-5p 1 0 0
chr1:52431149|52431279 hsa-miR-744-5p 1 0 0
chr1:52431149|52431279 hsa-miR-3675-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4763-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6787-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6816-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6775-5p 1 0 0
chr1:52431149|52431279 hsa-miR-3180 1 0 0
chr1:52431149|52431279 hsa-miR-6726-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6743-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6754-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6756-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6803-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6722-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6751-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6808-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6879-5p 1 0 0
chr1:52431149|52431279 hsa-miR-7111-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4728-5p 1 0 0
chr1:52431149|52431279 hsa-miR-5189-5p 1 0 0
chr1:52431149|52431279 hsa-miR-5196-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6780b-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6836-5p 1 0 0
chr1:52431149|52431279 hsa-miR-10396a-5p 1 0 0
chr1:52431149|52431279 hsa-miR-10396b-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1237-5p 1 0 0
chr1:52431149|52431279 hsa-miR-1909-3p 1 0 0
chr1:52431149|52431279 hsa-miR-328-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4649-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4685-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4726-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4745-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4749-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6729-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6795-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6846-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6848-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6858-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4697-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6885-5p 1 0 0
chr1:52431149|52431279 hsa-miR-939-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4758-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6856-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4665-5p 1 0 0
chr1:52431149|52431279 hsa-miR-324-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6724-5p 1 0 0
chr1:52431149|52431279 hsa-miR-6762-5p 1 0 0
chr1:52431149|52431279 hsa-miR-769-3p 1 0 0
chr1:52431149|52431279 hsa-miR-6837-5p 1 0 0
chr1:52431149|52431279 hsa-miR-4781-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:52431149|52431279
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIG
Nucleotide Sequence ATGCACAATATGGGATTGTTGCCAATGCACCCTCTCCAGATCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCCCAGCAATATTGGC
CircID chr1:52431149|52431279
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MDGPGRGRDLERVHWQQSHIVHGRILS
Nucleotide Sequence ATGGATGGGCCAGGACGGGGCAGGGATCTGGAGAGGGTGCATTGGCAACAATCCCATATTGTGCATGGGAGAATACTGAGC
CircID chr1:52431149|52431279
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MLGALPGAEWITGPWMGQDGAGIWRGCIGNNPILCMGEY
Nucleotide Sequence TTGCTGGGGGCACTGCCTGGTGCAGAGTGGATCACTGGGCCATGGATGGGCCAGGACGGGGCAGGGATCTGGAGAGGGTGCATTGGCAACAATCCCATATTGTGCATGGGAGAATACTGA
CircID chr1:52431149|52431279
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MVQSGSLGHGWARTGQGSGEGALATIPYCAWENTEL
Nucleotide Sequence CTGGTGCAGAGTGGATCACTGGGCCATGGATGGGCCAGGACGGGGCAGGGATCTGGAGAGGGTGCATTGGCAACAATCCCATATTGTGCATGGGAGAATACTGAGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab