CircNet

General Information

circRNA Basic Information

CircID	chr1:54053327\|54053439
Strand	-
CircType	exon
Host Gene	ENSG00000116209.10;
Algorism	CIRI2;
Sequence	CCGCCAGAAACTGCCGCCTCCTGCCTCACCTCTGGGACTACGAACTTCTTCTCCTAGGCTGGCGTGAGGAGGGGAATTCAACCATCGCAAGCGTTAGCGCGAAGCGGGGCCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr1:54053327\|54053439	hsa-miR-563	0	1
chr1:54053327\|54053439	hsa-miR-940	0	1
chr1:54053327\|54053439	hsa-miR-1253	0	1
chr1:54053327\|54053439	hsa-miR-1827	0	1
chr1:54053327\|54053439	hsa-miR-3147	1	0
chr1:54053327\|54053439	hsa-miR-4298	1	0
chr1:54053327\|54053439	hsa-miR-3937	1	0
chr1:54053327\|54053439	hsa-miR-4449	1	0
chr1:54053327\|54053439	hsa-miR-4458	1	0
chr1:54053327\|54053439	hsa-miR-4656	1	0
chr1:54053327\|54053439	hsa-miR-4710	1	0
chr1:54053327\|54053439	hsa-miR-4739	1	0
chr1:54053327\|54053439	hsa-miR-5090	1	0
chr1:54053327\|54053439	hsa-miR-6125	1	0
chr1:54053327\|54053439	hsa-miR-6133	1	0
chr1:54053327\|54053439	hsa-miR-8072	1	0
chr1:54053327\|54053439	hsa-miR-6765-5p	1	0
chr1:54053327\|54053439	hsa-miR-7851-3p	1	0
chr1:54053327\|54053439	hsa-miR-6089	1	0
chr1:54053327\|54053439	hsa-miR-6746-5p	1	0
chr1:54053327\|54053439	hsa-miR-6805-5p	1	0
chr1:54053327\|54053439	hsa-miR-6782-5p	1	0
chr1:54053327\|54053439	hsa-miR-6821-5p	1	0
chr1:54053327\|54053439	hsa-miR-5006-5p	1	0
chr1:54053327\|54053439	hsa-miR-6786-5p	1	0
chr1:54053327\|54053439	hsa-miR-4640-5p	1	0
chr1:54053327\|54053439	hsa-let-7b-5p	1	0
chr1:54053327\|54053439	hsa-miR-6825-3p	1	0
chr1:54053327\|54053439	hsa-let-7c-5p	1	0
chr1:54053327\|54053439	hsa-let-7e-5p	1	0
chr1:54053327\|54053439	hsa-miR-1207-5p	1	0
chr1:54053327\|54053439	hsa-miR-4763-3p	1	0
chr1:54053327\|54053439	hsa-miR-6812-5p	1	0
chr1:54053327\|54053439	hsa-miR-6743-5p	1	0
chr1:54053327\|54053439	hsa-miR-6808-5p	1	0
chr1:54053327\|54053439	hsa-miR-6879-5p	1	0
chr1:54053327\|54053439	hsa-miR-1915-3p	1	0
chr1:54053327\|54053439	hsa-miR-10396b-5p	1	0
chr1:54053327\|54053439	hsa-miR-328-5p	1	0
chr1:54053327\|54053439	hsa-miR-6729-5p	1	0
chr1:54053327\|54053439	hsa-miR-6858-5p	1	0
chr1:54053327\|54053439	hsa-miR-6799-3p	1	0
chr1:54053327\|54053439	hsa-miR-6791-5p	1	0
chr1:54053327\|54053439	hsa-miR-10392-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:54053327\|54053439
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MPHLWDYELLLLGWREEGNSTIASVSAKRGL
Nucleotide Sequence	CTGCCTCACCTCTGGGACTACGAACTTCTTCTCCTAGGCTGGCGTGAGGAGGGGAATTCAACCATCGCAAGCGTTAGCGCGAAGCGGGGCCTC

CircID	chr1:54053327\|54053439
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRWLNSPPHASLGEEVRSPRGEAGGGSFWR
Nucleotide Sequence	TTGCGATGGTTGAATTCCCCTCCTCACGCCAGCCTAGGAGAAGAAGTTCGTAGTCCCAGAGGTGAGGCAGGAGGCGGCAGTTTCTGGCGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information