CircNet

General Information

circRNA Basic Information

CircID	chr1:54850000\|54850139
Strand	-
CircType	exon
Host Gene	ENSG00000116133.10;
Algorism	CIRI2;
Sequence	CATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAAAAGCCATGAACTCAGCTCACCATGCTAAGAAGACTGCCTCTTTCCAGGCAAGATTTTACTGGAGCAACATAACCGGAGGGTGTGATTCCAAAATACCTTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:54850000\|54850139	hsa-miR-135b-5p	0	0	1
chr1:54850000\|54850139	hsa-miR-135b-3p	0	0	1
chr1:54850000\|54850139	hsa-miR-558	0	0	1
chr1:54850000\|54850139	hsa-miR-575	0	0	1
chr1:54850000\|54850139	hsa-miR-583	0	0	1
chr1:54850000\|54850139	hsa-miR-661	0	0	1
chr1:54850000\|54850139	hsa-miR-1228-5p	0	0	1
chr1:54850000\|54850139	hsa-miR-1228-3p	0	0	1
chr1:54850000\|54850139	hsa-miR-1206	0	0	1
chr1:54850000\|54850139	hsa-miR-1827	0	0	1
chr1:54850000\|54850139	hsa-miR-129-5p	0	0	1
chr1:54850000\|54850139	hsa-miR-770-5p	0	0	1
chr1:54850000\|54850139	hsa-miR-671-3p	0	0	1
chr1:54850000\|54850139	hsa-miR-875-3p	0	0	1
chr1:54850000\|54850139	hsa-miR-135a	0	0	1
chr1:54850000\|54850139	hsa-miR-1254	0	0	1
chr1:54850000\|54850139	hsa-miR-220a	0	0	1
chr1:54850000\|54850139	hsa-miR-554	0	1	0
chr1:54850000\|54850139	hsa-miR-4322	1	0	0
chr1:54850000\|54850139	hsa-miR-4656	1	0	0
chr1:54850000\|54850139	hsa-miR-4682	1	1	0
chr1:54850000\|54850139	hsa-miR-8077	1	0	0
chr1:54850000\|54850139	hsa-miR-219a-1-3p	1	0	0
chr1:54850000\|54850139	hsa-miR-8071	1	0	0
chr1:54850000\|54850139	hsa-miR-4695-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-7160-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-6821-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-3191-5p	0	1	0
chr1:54850000\|54850139	hsa-miR-3160-3p	1	0	0
chr1:54850000\|54850139	hsa-miR-3190-5p	0	1	0
chr1:54850000\|54850139	hsa-miR-654-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-1910-5p	1	1	0
chr1:54850000\|54850139	hsa-miR-34a-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-6748-3p	0	1	0
chr1:54850000\|54850139	hsa-miR-6838-3p	0	1	0
chr1:54850000\|54850139	hsa-miR-2116-5p	0	1	0
chr1:54850000\|54850139	hsa-miR-3620-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-449c-5p	0	1	0
chr1:54850000\|54850139	hsa-miR-6848-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-939-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-34b-5p	0	1	0
chr1:54850000\|54850139	hsa-miR-3116	0	1	0
chr1:54850000\|54850139	hsa-miR-4646-5p	1	0	0
chr1:54850000\|54850139	hsa-miR-4659b-3p	1	1	0
chr1:54850000\|54850139	hsa-miR-4659a-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:54850000\|54850139
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MDGQGQDWLQKKAMNSAHHAKKTASFQARFYWSNITGGCDSKIP
Nucleotide Sequence	ATGGATGGCCAGGGACAGGACTGGCTACAAAAAAAAGCCATGAACTCAGCTCACCATGCTAAGAAGACTGCCTCTTTCCAGGCAAGATTTTACTGGAGCAACATAACCGGAGGGTGTGATTCCAAAATACCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information