CircNet

General Information

circRNA Basic Information

CircID	chr1:58506060\|58536741
Strand	-
CircType	exon
Host Gene	ENSG00000162600.11;
Algorism	find_circ;CIRI2;CIRC
Sequence	GGGCATAAGGAAATGGTGGCAGGCACTTCCTCCTAACAAGAAGGAAGTAGTTAAAGAAAATATAAGGAAGAATAAATGGAAGCTATTCCTTGGTTTGAGTAGTTTTGGATTGCTCTTTGTGGTGTTTTATTTTACTCACCTGGAAGTAAGTCCAATCACAGGAAGGAGCAAGCTACTATTATTGGGGAAAGAACAGTTCAGACTTTTATCGGAACTGGAATATGAAGCATGGATGGAAGAATTTAAAAATGATATGCTAACTGAGAAAGATGCCCGATACCTGGCTGTTAAAGAAGTGCTTTGTCATCTAATTGAATGCAATAAAGATGTTCCAGGGATCTCTCAGATCAATTGGGTTATTCATGTGGTTGATTCCCCAATTATTAATGCCTTCGTGCTTCCAAATGGACAAATGTTTGTTTTCACTGGATTTTTAAATAGTGTAACCGATATTCATCAACTTTCTTTCCTTCTGGGCCATGAAATAGCACATGCAGTACTTGGGCATGCTGCAGAAAAGGCTGGCATGGTTCATTTGTTGGATTTCCTAGGTATGATTTTCCTCACAATGATTTGGGCCATTTGTCCTCGAGATAGCTTGGCACTTTTGTGCCAGTGGATACAGTCTAAATTGCAGGAGAGAGAAAACCCAGCCACTGACCCTTCCTTTCGTAGTAACTGAATGACTCCCAAATTCAGCTGTCCCTTGGTATACAGGACTTCTTGTGGATACCAAAATCTGAGTATGCTCAAGTCCTTGATAAAAAATGGCATGGTATTGGCCGGGCGCCGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGTATATGTTTAATAGACCATACAGCAGAAAATTGGAGGCCGAAGCTGACAAAATTGGACTACTGCTTGCTGCAAAGAAATTACAAAGTATCTCCATTAAGTTACACTGATTATGCCTGCCTTTCCTGTCTCCCGTTCTACCTCTGCCACCCCTGGAACTGCAAGACCAACTCTCCTCTTCCTTCTCAGTCTACTCAGTGTGAAGATAAGGATGGAGACATTTATGATGATCCACTTCCACTTAATGAATAAGGTATTCTCTGTGCTAAGTGGTCACTTAGAGCATAGCAGATCTCTTCACTCATTCAGAGCCTGAGATAAGAAAACCAGAGTCTAAAGATGTAAAGTGATTTATCTAATAACCTATACCTAGTTAGTAGGAAGACCCTTAGTTCTTATTTTTCAGGCTTGTGCAGACATAAGAGCCAGTTCAGTGTTTTGGCAGCAAATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCCAGAATGGTTATCTACACACCCTTCTCATGGCAATCGAGTTGAGTACTTGGATAGACTTATACCTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:58506060\|58536741	hsa-miR-96-5p	0	0	1
chr1:58506060\|58536741	hsa-miR-96-3p	0	0	1
chr1:58506060\|58536741	hsa-miR-182-5p	0	0	1
chr1:58506060\|58536741	hsa-miR-182-3p	0	0	1
chr1:58506060\|58536741	hsa-miR-545-5p	0	0	1
chr1:58506060\|58536741	hsa-miR-545-3p	0	0	1
chr1:58506060\|58536741	hsa-miR-575	0	0	1
chr1:58506060\|58536741	hsa-miR-596	1	1	1
chr1:58506060\|58536741	hsa-miR-603	0	0	1
chr1:58506060\|58536741	hsa-miR-618	1	1	1
chr1:58506060\|58536741	hsa-miR-1271-5p	0	0	1
chr1:58506060\|58536741	hsa-miR-1271-3p	0	0	1
chr1:58506060\|58536741	hsa-miR-890	1	1	1
chr1:58506060\|58536741	hsa-miR-1261	0	0	1
chr1:58506060\|58536741	hsa-miR-4533	1	1	1
chr1:58506060\|58536741	hsa-miR-8060	1	1	1
chr1:58506060\|58536741	hsa-miR-132-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-6747-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-4687-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-219a-1-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-486-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-6089	1	1	1
chr1:58506060\|58536741	hsa-miR-6757-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-3064-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-3622b-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-181a-2-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-6858-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-4713-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-4436b-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-4763-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-6894-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-4640-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-5010-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-4715-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-5004-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-6514-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-3691-5p	1	1	1
chr1:58506060\|58536741	hsa-miR-5001-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-6757-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-885-3p	1	1	1
chr1:58506060\|58536741	hsa-miR-875-5p	0	0	1
chr1:58506060\|58536741	hsa-miR-362-3p	0	1	1
chr1:58506060\|58536741	hsa-miR-329	0	0	1
chr1:58506060\|58536741	hsa-miR-219-1-3p	0	0	1
chr1:58506060\|58536741	hsa-miR-4538	1	0	0
chr1:58506060\|58536741	hsa-miR-6807-5p	1	0	0
chr1:58506060\|58536741	hsa-miR-5189-3p	0	1	0
chr1:58506060\|58536741	hsa-miR-4714-3p	0	1	0
chr1:58506060\|58536741	hsa-miR-6862-5p	0	1	0
chr1:58506060\|58536741	hsa-miR-4726-5p	1	0	0
chr1:58506060\|58536741	hsa-miR-675-5p	1	0	0
chr1:58506060\|58536741	hsa-miR-487b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:58506060\|58536741
ORF Type	ORF1
Protein Length	150
Nucleotide Length	450
Protein Sequence	MEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWAICPRDSLALLCQWIQSKLQERENPATDPSFRSN*
Nucleotide Sequence	ATGGAAGAATTTAAAAATGATATGCTAACTGAGAAAGATGCCCGATACCTGGCTGTTAAAGAAGTGCTTTGTCATCTAATTGAATGCAATAAAGATGTTCCAGGGATCTCTCAGATCAATTGGGTTATTCATGTGGTTGATTCCCCAATTATTAATGCCTTCGTGCTTCCAAATGGACAAATGTTTGTTTTCACTGGATTTTTAAATAGTGTAACCGATATTCATCAACTTTCTTTCCTTCTGGGCCATGAAATAGCACATGCAGTACTTGGGCATGCTGCAGAAAAGGCTGGCATGGTTCATTTGTTGGATTTCCTAGGTATGATTTTCCTCACAATGATTTGGGCCATTTGTCCTCGAGATAGCTTGGCACTTTTGTGCCAGTGGATACAGTCTAAATTGCAGGAGAGAGAAAACCCAGCCACTGACCCTTCCTTTCGTAGTAACTGA

CircID	chr1:58506060\|58536741
ORF Type	ORF2
Protein Length	81
Nucleotide Length	243
Protein Sequence	MPFFIKDLSILRFWYPQEVLYTKGQLNLGVIQLLRKEGSVAGFSLSCNLDCIHWHKSAKLSRGQMAQIIVRKIIPRKSNK*
Nucleotide Sequence	ATGCCATTTTTTATCAAGGACTTGAGCATACTCAGATTTTGGTATCCACAAGAAGTCCTGTATACCAAGGGACAGCTGAATTTGGGAGTCATTCAGTTACTACGAAAGGAAGGGTCAGTGGCTGGGTTTTCTCTCTCCTGCAATTTAGACTGTATCCACTGGCACAAAAGTGCCAAGCTATCTCGAGGACAAATGGCCCAAATCATTGTGAGGAAAATCATACCTAGGAAATCCAACAAATGA

CircID	chr1:58506060\|58536741
ORF Type	ORF3
Protein Length	68
Nucleotide Length	204
Protein Sequence	MPAFPVSRSTSATPGTARPTLLFLLSLLSVKIRMETFMMIHFHLMNKVFSVLSGHLEHSRSLHSFRA*
Nucleotide Sequence	ATGCCTGCCTTTCCTGTCTCCCGTTCTACCTCTGCCACCCCTGGAACTGCAAGACCAACTCTCCTCTTCCTTCTCAGTCTACTCAGTGTGAAGATAAGGATGGAGACATTTATGATGATCCACTTCCACTTAATGAATAAGGTATTCTCTGTGCTAAGTGGTCACTTAGAGCATAGCAGATCTCTTCACTCATTCAGAGCCTGA

CircID	chr1:58506060\|58536741
ORF Type	ORF4
Protein Length	59
Nucleotide Length	177
Protein Sequence	MEILCNFFAASSSPILSASASNFLLYGLLNIYLASQSAEITGMSHGARPIPCHFLSRT*
Nucleotide Sequence	ATGGAGATACTTTGTAATTTCTTTGCAGCAAGCAGTAGTCCAATTTTGTCAGCTTCGGCCTCCAATTTTCTGCTGTATGGTCTATTAAACATATACTTGGCCTCCCAAAGTGCTGAGATTACAGGCATGAGCCACGGCGCCCGGCCAATACCATGCCATTTTTTATCAAGGACTTGA

CircID	chr1:58506060\|58536741
ORF Type	ORF5
Protein Length	47
Nucleotide Length	141
Protein Sequence	MPVISALWEAKYMFNRPYSRKLEAEADKIGLLLAAKKLQSISIKLH*
Nucleotide Sequence	ATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGTATATGTTTAATAGACCATACAGCAGAAAATTGGAGGCCGAAGCTGACAAAATTGGACTACTGCTTGCTGCAAAGAAATTACAAAGTATCTCCATTAAGTTACACTGA

CircID	chr1:58506060\|58536741
ORF Type	ORF6
Protein Length	42
Nucleotide Length	126
Protein Sequence	MTPKFSCPLVYRTSCGYQNLSMLKSLIKNGMVLAGRRGSCL*
Nucleotide Sequence	ATGACTCCCAAATTCAGCTGTCCCTTGGTATACAGGACTTCTTGTGGATACCAAAATCTGAGTATGCTCAAGTCCTTGATAAAAAATGGCATGGTATTGGCCGGGCGCCGTGGCTCATGCCTGTAA

CircID	chr1:58506060\|58536741
ORF Type	ORF7
Protein Length	37
Nucleotide Length	111
Protein Sequence	MFQGSLRSIGLFMWLIPQLLMPSCFQMDKCLFSLDF*
Nucleotide Sequence	ATGTTCCAGGGATCTCTCAGATCAATTGGGTTATTCATGTGGTTGATTCCCCAATTATTAATGCCTTCGTGCTTCCAAATGGACAAATGTTTGTTTTCACTGGATTTTTAA

CircID	chr1:58506060\|58536741
ORF Type	ORF8
Protein Length	36
Nucleotide Length	108
Protein Sequence	MEFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQ
Nucleotide Sequence	ATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCCAGAATGGTTATCTACACACCCTTCTCATGGCAATCGAGTTGAGTACTTGGATAGACTTATACCTCAG

CircID	chr1:58506060\|58536741
ORF Type	ORF9
Protein Length	34
Nucleotide Length	102
Protein Sequence	MNHASLFCSMPKYCMCYFMAQKERKLMNIGYTI*
Nucleotide Sequence	ATGAACCATGCCAGCCTTTTCTGCAGCATGCCCAAGTACTGCATGTGCTATTTCATGGCCCAGAAGGAAAGAAAGTTGATGAATATCGGTTACACTATTTAA

CircID	chr1:58506060\|58536741
ORF Type	ORF10
Protein Length	66
Nucleotide Length	198
Protein Sequence	LDYCLLQRNYKVSPLSYTDYACLSCLPFYLCHPWNCKTNSPLPSQSTQCEDKDGDIYDDPLPLNE*
Nucleotide Sequence	TTGGACTACTGCTTGCTGCAAAGAAATTACAAAGTATCTCCATTAAGTTACACTGATTATGCCTGCCTTTCCTGTCTCCCGTTCTACCTCTGCCACCCCTGGAACTGCAAGACCAACTCTCCTCTTCCTTCTCAGTCTACTCAGTGTGAAGATAAGGATGGAGACATTTATGATGATCCACTTCCACTTAATGAATAA

CircID	chr1:58506060\|58536741
ORF Type	ORF11
Protein Length	63
Nucleotide Length	189
Protein Sequence	LVSTRSPVYQGTAEFGSHSVTTKGRVSGWVFSLLQFRLYPLAQKCQAISRTNGPNHCEENHT*
Nucleotide Sequence	TTGGTATCCACAAGAAGTCCTGTATACCAAGGGACAGCTGAATTTGGGAGTCATTCAGTTACTACGAAAGGAAGGGTCAGTGGCTGGGTTTTCTCTCTCCTGCAATTTAGACTGTATCCACTGGCACAAAAGTGCCAAGCTATCTCGAGGACAAATGGCCCAAATCATTGTGAGGAAAATCATACCTAG

CircID	chr1:58506060\|58536741
ORF Type	ORF1
Protein Length	27
Nucleotide Length	81
Protein Sequence	MGWPCRLSTNSICCQNTELALMSAQAC
Nucleotide Sequence	TTGGGTTGGCCATGCAGGCTATCAACGAACTCCATTTGCTGCCAAAACACTGAACTGGCTCTTATGTCTGCACAAGCATGC

CircID	chr1:58506060\|58536741
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MASWVGHAGYQRTPFAAKTLNWLLCLHKHA
Nucleotide Sequence	CTGGCATCTTGGGTTGGCCATGCAGGCTATCAACGAACTCCATTTGCTGCCAAAACACTGAACTGGCTCTTATGTCTGCACAAGCATGCC

CircID	chr1:58506060\|58536741
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MEFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQ
Nucleotide Sequence	ATGGAGTTCGTTGATAGCCTGCATGGCCAACCCAAGATGCCAGAATGGTTATCTACACACCCTTCTCATGGCAATCGAGTTGAGTACTTGGATAGACTTATACCTCAG

CircID	chr1:58506060\|58536741
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MIACMANPRCQNGYLHTLLMAIELSTWIDLYL
Nucleotide Sequence	TTGATAGCCTGCATGGCCAACCCAAGATGCCAGAATGGTTATCTACACACCCTTCTCATGGCAATCGAGTTGAGTACTTGGATAGACTTATACCTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:58506060\|58536741	NOP56	1	0	0
chr1:58506060\|58536741	MOV10	0	0	3
chr1:58506060\|58536741	ELAVL1	5	3	6
chr1:58506060\|58536741	SF3B4	0	0	1
chr1:58506060\|58536741	PRPF8	1	1	6
chr1:58506060\|58536741	TAF15	0	1	0
chr1:58506060\|58536741	CPSF6	1	0	0
chr1:58506060\|58536741	FUS	1	1	0
chr1:58506060\|58536741	DGCR8	0	0	1
chr1:58506060\|58536741	QKI	0	0	1
chr1:58506060\|58536741	DROSHA	0	0	1
chr1:58506060\|58536741	SRSF1	2	0	3
chr1:58506060\|58536741	NOP58	1	0	9
chr1:58506060\|58536741	U2AF1	0	0	2
chr1:58506060\|58536741	U2AF2	28	7	22
chr1:58506060\|58536741	DDX54	0	1	10
chr1:58506060\|58536741	EFTUD2	0	0	4
chr1:58506060\|58536741	RBM10	1	0	0
chr1:58506060\|58536741	HNRNPM	1	1	0
chr1:58506060\|58536741	RBM15	0	0	4
chr1:58506060\|58536741	FIP1L1	0	0	1
chr1:58506060\|58536741	HNRNPC	1	0	1
chr1:58506060\|58536741	TRA2A	0	0	1
chr1:58506060\|58536741	DHX9	0	0	1
chr1:58506060\|58536741	DDX3X	0	0	1
chr1:58506060\|58536741	ZC3H7B	0	0	1
chr1:58506060\|58536741	HNRNPA1	4	0	1
chr1:58506060\|58536741	LIN28B	0	0	7
chr1:58506060\|58536741	FXR1	1	0	3
chr1:58506060\|58536741	IGF2BP1	0	0	10
chr1:58506060\|58536741	IGF2BP3	0	0	4
chr1:58506060\|58536741	IGF2BP2	2	1	10
chr1:58506060\|58536741	FTO	1	0	0
chr1:58506060\|58536741	TARDBP	1	0	0
chr1:58506060\|58536741	RBM47	2	0	5
chr1:58506060\|58536741	GEMIN5	0	0	1
chr1:58506060\|58536741	ILF3	0	0	1
chr1:58506060\|58536741	AGO2	0	0	3
chr1:58506060\|58536741	EIF4A3	0	0	9
chr1:58506060\|58536741	FBL	0	1	5

CircRNA Information