CircNet

General Information

circRNA Basic Information

CircID	chr1:58578548\|58578693
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	GCGGGAGACTTGCTTGAACCTGGGCGGCGGAGGTTGTGGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGGGCAAAACTCCGTCTCAAAAAAAAAAAAGAAAAAAGAAATTGTCCCTCACATGTCTCTGCTTCCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:58578548\|58578693	hsa-miR-197-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-197-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-122-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-122-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-130a-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-130a-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-301a-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-301a-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-130b-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-130b-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-498-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-498-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-454-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-454-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-874-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-874-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-301b-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-301b-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-938	0	0	1
chr1:58578548\|58578693	hsa-miR-1294	0	0	1
chr1:58578548\|58578693	hsa-miR-1307-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-1307-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-129-5p	0	0	1
chr1:58578548\|58578693	hsa-miR-139-3p	0	0	1
chr1:58578548\|58578693	hsa-miR-220b	0	0	1
chr1:58578548\|58578693	hsa-miR-608	1	0	0
chr1:58578548\|58578693	hsa-miR-1303	1	1	0
chr1:58578548\|58578693	hsa-miR-3135a	1	1	0
chr1:58578548\|58578693	hsa-miR-4284	0	1	0
chr1:58578548\|58578693	hsa-miR-3615	0	1	0
chr1:58578548\|58578693	hsa-miR-3652	0	1	0
chr1:58578548\|58578693	hsa-miR-4430	0	1	0
chr1:58578548\|58578693	hsa-miR-3135b	0	1	0
chr1:58578548\|58578693	hsa-miR-4739	1	0	0
chr1:58578548\|58578693	hsa-miR-6734-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-504-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-4726-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-6765-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-671-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-7847-3p	1	0	0
chr1:58578548\|58578693	hsa-miR-7845-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-3126-5p	0	1	0
chr1:58578548\|58578693	hsa-miR-2467-3p	1	1	0
chr1:58578548\|58578693	hsa-miR-3934-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-6834-5p	0	1	0
chr1:58578548\|58578693	hsa-miR-6828-5p	1	1	0
chr1:58578548\|58578693	hsa-miR-423-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-2355-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-5001-5p	0	1	0
chr1:58578548\|58578693	hsa-miR-6743-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6780a-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6875-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6795-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6887-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6511a-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-4665-5p	1	0	0
chr1:58578548\|58578693	hsa-miR-6511a-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-6511b-3p	0	1	0
chr1:58578548\|58578693	hsa-miR-19a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:58578548\|58578693
ORF Type	ORF1
Protein Length	29
Nucleotide Length	87
Protein Sequence	MHSSLGNKGKTPSQKKKRKKKLSLTCLCF
Nucleotide Sequence	TTGCACTCCAGCCTGGGCAACAAGGGCAAAACTCCGTCTCAAAAAAAAAAAAGAAAAAAGAAATTGTCCCTCACATGTCTCTGCTTC

CircID	chr1:58578548\|58578693
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MNLGGGGCGEPRSRHCTPAWATRAKLRLKKKKEKRNCPSHVSAS
Nucleotide Sequence	TTGAACCTGGGCGGCGGAGGTTGTGGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGGGCAAAACTCCGTCTCAAAAAAAAAAAAGAAAAAAGAAATTGTCCCTCACATGTCTCTGCTTCC

CircID	chr1:58578548\|58578693
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MPLLPRLECNGVISAHHNLRRPGSSKSP
Nucleotide Sequence	TTGCCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACCACAACCTCCGCCGCCCAGGTTCAAGCAAGTCTCCC

CircID	chr1:58578548\|58578693
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MRRSFALVAQAGVQWRDLGSPQPPPPRFKQVSR
Nucleotide Sequence	TTGAGACGGAGTTTTGCCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACCACAACCTCCGCCGCCCAGGTTCAAGCAAGTCTCCCGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information