CircNet

General Information

circRNA Basic Information

CircID	chr1:5927649\|5961949
Strand	-
CircType	exon
Host Gene	ENSG00000131697.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAAACAGACACATGACCCTCATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAACCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGAAGCTGATTCTGGAAGGGTGACCCTGCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTCTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:5927649\|5961949	hsa-miR-17-3p	0	1	1
chr1:5927649\|5961949	hsa-miR-145-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:5927649\|5961949
ORF Type	ORF1
Protein Length	111
Nucleotide Length	333
Protein Sequence	MENPAASVTSLSNLACMHMVRWAVWNPLLEADSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAPTEPVSGPKVERRPSRKPPTSPS
Nucleotide Sequence	ATGGAGAATCCGGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGAAGCTGATTCTGGAAGGGTGACCCTGCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTCTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCG

CircID	chr1:5927649\|5961949
ORF Type	ORF2
Protein Length	76
Nucleotide Length	228
Protein Sequence	MTLIENCSLQYTLKPHPALEPAFHLLPENLLVSGLQQIPGLLPAHGESGSFGHLSVQPGMHAHGPLGCLEPLAGS*
Nucleotide Sequence	ATGACCCTCATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAACCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGAAGCTGA

CircID	chr1:5927649\|5961949
ORF Type	ORF3
Protein Length	66
Nucleotide Length	198
Protein Sequence	MCMHARLDREVTEAAGFSMSWKQARYLLQTRHQKVLRKKVERRLQGRVWLQRVLQAAVLNEGHVSV
Nucleotide Sequence	ATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCCGGATTCTCCATGAGCTGGAAGCAGGCCAGGTATCTGCTGCAGACCAGACACCAGAAGGTTCTCAGGAAGAAGGTGGAACGCAGGCTCCAGGGCCGGGTGTGGCTTCAGCGTGTACTGCAGGCTGCAGTTCTCAATGAGGGTCATGTGTCTGTT

CircID	chr1:5927649\|5961949
ORF Type	ORF4
Protein Length	92
Nucleotide Length	276
Protein Sequence	VRGVGLDPTLQRQGHPSRISFQQGVPNSPADHVHACQVGQRGDRSCRILHELEAGQVSAADQTPEGSQEEGGTQAPGPGVASACTAGCSSQ*
Nucleotide Sequence	GTGCGAGGGGTTGGGCTGGATCCCACCCTGCAGAGGCAGGGTCACCCTTCCAGAATCAGCTTCCAGCAAGGGGTTCCAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCCGGATTCTCCATGAGCTGGAAGCAGGCCAGGTATCTGCTGCAGACCAGACACCAGAAGGTTCTCAGGAAGAAGGTGGAACGCAGGCTCCAGGGCCGGGTGTGGCTTCAGCGTGTACTGCAGGCTGCAGTTCTCAATGA

CircID	chr1:5927649\|5961949
ORF Type	ORF5
Protein Length	81
Nucleotide Length	243
Protein Sequence	VHPGVLLSPARTGTGVYPTPPASPLQSSCWLRVPCRPDSARGWAGSHPAEAGSPFQNQLPARGSKQPSGPCACMPGWTER*
Nucleotide Sequence	GTGCATCCAGGTGTTCTTCTGAGCCCAGCGAGAACTGGAACCGGAGTGTACCCGACTCCACCTGCTTCACCTCTTCAGAGCTCATGCTGGCTGAGGGTACCTTGTAGACCAGACAGTGCGAGGGGTTGGGCTGGATCCCACCCTGCAGAGGCAGGGTCACCCTTCCAGAATCAGCTTCCAGCAAGGGGTTCCAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGA

CircID	chr1:5927649\|5961949
ORF Type	ORF6
Protein Length	53
Nucleotide Length	159
Protein Sequence	EPSGVWSAADTWPASSSWRIRQLRSPLCPTWHACTWSAGLFGTPCWKLILEG*
Nucleotide Sequence	GAACCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGAAGCTGATTCTGGAAGGGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:5927649\|5961949	MOV10	0	0	4
chr1:5927649\|5961949	FUS	2	1	0
chr1:5927649\|5961949	ZRANB2	2	0	0
chr1:5927649\|5961949	CELF2	0	2	0
chr1:5927649\|5961949	PRPF8	0	3	0
chr1:5927649\|5961949	NUDT21	0	1	0
chr1:5927649\|5961949	CPSF4	0	1	0
chr1:5927649\|5961949	TROVE2	0	0	1
chr1:5927649\|5961949	ELAVL1	0	4	0
chr1:5927649\|5961949	SRSF7	0	0	2
chr1:5927649\|5961949	DDX59	0	0	1
chr1:5927649\|5961949	SRSF1	0	1	4
chr1:5927649\|5961949	U2AF2	1	1	0
chr1:5927649\|5961949	RBM10	2	2	0
chr1:5927649\|5961949	PCBP2	0	0	4
chr1:5927649\|5961949	HNRNPA2B1	0	1	0
chr1:5927649\|5961949	FIP1L1	0	1	0
chr1:5927649\|5961949	PTBP1	1	11	0
chr1:5927649\|5961949	HNRNPC	0	11	0
chr1:5927649\|5961949	TRA2A	0	1	0
chr1:5927649\|5961949	HNRNPM	0	2	0
chr1:5927649\|5961949	ZNF184	0	1	0
chr1:5927649\|5961949	DDX3X	0	0	1
chr1:5927649\|5961949	LIN28B	0	0	3
chr1:5927649\|5961949	FXR2	0	0	2
chr1:5927649\|5961949	IGF2BP3	0	0	1
chr1:5927649\|5961949	IGF2BP2	1	0	3
chr1:5927649\|5961949	TARDBP	2	0	0
chr1:5927649\|5961949	CSTF2	0	2	0
chr1:5927649\|5961949	WDR33	0	1	0
chr1:5927649\|5961949	HNRNPK	1	0	0
chr1:5927649\|5961949	FBL	0	0	1
chr1:5927649\|5961949	EIF4A3	1	2	8
chr1:5927649\|5961949	AGO2	1	0	0

CircRNA Information