CircNet

General Information

circRNA Basic Information

CircID	chr1:61404104\|61406727
Strand	+
CircType	exon
Host Gene	ENSG00000162599.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	CAAGTCCGCATGCAACACCATCGACTCTTCATTTCCCGACATCACCCATTATCCAGCAGCCTGGGCCTTACTTCTCACACCCAGCCATCCGCTATCACCCTCAGGAGACGCTGAAAGAATTTGTCCAACTTGTCTGCCCTGATGCTGGTCAGCAGGCTGGACAGGTGGGGTTCCTCAATCCCAATGGGAGCAGCCAAGGCAAGGTGCACAACCCATTCCTTCCCACCCCAATGTTGCCACCGCCACCGCCACCACCGATGGCCAGGCCTGTGCCTCTGCCGGTGCCAGACACAAAGCCTCCAACCACGTCAACAGAAGGAGGTGCAGCCTCCCCCACGTCACCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:61404104\|61406727	hsa-miR-93-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:61404104\|61406727
ORF Type	ORF1
Protein Length	68
Nucleotide Length	204
Protein Sequence	MLVSRLDRWGSSIPMGAAKARCTTHSFPPQCCHRHRHHRWPGLCLCRCQTQSLQPRQQKEVQPPPRHQ
Nucleotide Sequence	ATGCTGGTCAGCAGGCTGGACAGGTGGGGTTCCTCAATCCCAATGGGAGCAGCCAAGGCAAGGTGCACAACCCATTCCTTCCCACCCCAATGTTGCCACCGCCACCGCCACCACCGATGGCCAGGCCTGTGCCTCTGCCGGTGCCAGACACAAAGCCTCCAACCACGTCAACAGAAGGAGGTGCAGCCTCCCCCACGTCACCAA

CircID	chr1:61404104\|61406727
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSP
Nucleotide Sequence	ATGTTGCCACCGCCACCGCCACCACCGATGGCCAGGCCTGTGCCTCTGCCGGTGCCAGACACAAAGCCTCCAACCACGTCAACAGAAGGAGGTGCAGCCTCCCCCACGTCACCA

CircID	chr1:61404104\|61406727
ORF Type	ORF3
Protein Length	35
Nucleotide Length	105
Protein Sequence	MQHHRLFISRHHPLSSSLGLTSHTQPSAITLRRR*
Nucleotide Sequence	ATGCAACACCATCGACTCTTCATTTCCCGACATCACCCATTATCCAGCAGCCTGGGCCTTACTTCTCACACCCAGCCATCCGCTATCACCCTCAGGAGACGCTGA

CircID	chr1:61404104\|61406727
ORF Type	ORF4
Protein Length	63
Nucleotide Length	189
Protein Sequence	VGEAAPPSVDVVGGFVSGTGRGTGLAIGGGGGGGNIGVGRNGLCTLPWLLPLGLRNPTCPAC*
Nucleotide Sequence	GTGGGGGAGGCTGCACCTCCTTCTGTTGACGTGGTTGGAGGCTTTGTGTCTGGCACCGGCAGAGGCACAGGCCTGGCCATCGGTGGTGGCGGTGGCGGTGGCAACATTGGGGTGGGAAGGAATGGGTTGTGCACCTTGCCTTGGCTGCTCCCATTGGGATTGAGGAACCCCACCTGTCCAGCCTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:61404104\|61406727	ELAVL1	1	1	1
chr1:61404104\|61406727	PRPF8	0	1	0
chr1:61404104\|61406727	UPF1	1	0	0
chr1:61404104\|61406727	SRSF10	1	0	0
chr1:61404104\|61406727	TAF15	0	1	0
chr1:61404104\|61406727	FMR1	0	0	2
chr1:61404104\|61406727	FUS	1	0	0
chr1:61404104\|61406727	SRSF1	0	1	0
chr1:61404104\|61406727	NOP58	0	0	2
chr1:61404104\|61406727	U2AF2	6	4	0
chr1:61404104\|61406727	DDX54	0	0	6
chr1:61404104\|61406727	HNRNPL	1	0	0
chr1:61404104\|61406727	PTBP1	1	3	0
chr1:61404104\|61406727	HNRNPC	1	0	0
chr1:61404104\|61406727	IGF2BP1	0	0	4
chr1:61404104\|61406727	IGF2BP3	1	0	4
chr1:61404104\|61406727	IGF2BP2	3	0	6
chr1:61404104\|61406727	TARDBP	1	1	0
chr1:61404104\|61406727	YTHDC1	1	0	0
chr1:61404104\|61406727	CSTF2T	0	3	1
chr1:61404104\|61406727	WDR33	1	1	0
chr1:61404104\|61406727	FBL	0	1	0
chr1:61404104\|61406727	EWSR1	0	1	0
chr1:61404104\|61406727	EIF4A3	1	9	1
chr1:61404104\|61406727	AGO2	0	0	3

CircRNA Information