CircRNA Information

General Information
circRNA Basic Information
CircID chr1:61461551|61461674
Strand +
CircType exon
Host Gene ENSG00000162599.14;
Algorism CIRI2;
Sequence CAGGCACACAGATGAGGTCCCACCCCCACACACTGTCTCCCTGTTCTCACGACCAGCTGTGGGTGGTCCCCCTTATCTTTCTAAGCATTTCCGCTATCTGCTCCCCACATACCATCCCCCTAAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:61461551|61461674 hsa-miR-146a-5p 0 0 1
chr1:61461551|61461674 hsa-miR-146a-3p 0 0 1
chr1:61461551|61461674 hsa-miR-589-5p 0 0 1
chr1:61461551|61461674 hsa-miR-589-3p 0 0 1
chr1:61461551|61461674 hsa-miR-608 1 1 1
chr1:61461551|61461674 hsa-miR-939-5p 0 0 1
chr1:61461551|61461674 hsa-miR-939-3p 0 0 1
chr1:61461551|61461674 hsa-miR-491-5p 0 0 1
chr1:61461551|61461674 hsa-miR-299-3p 0 0 1
chr1:61461551|61461674 hsa-miR-1207-3p 0 0 1
chr1:61461551|61461674 hsa-miR-146b-5p 0 0 1
chr1:61461551|61461674 hsa-miR-550 0 0 1
chr1:61461551|61461674 hsa-miR-644 0 0 1
chr1:61461551|61461674 hsa-miR-147 0 0 1
chr1:61461551|61461674 hsa-miR-1268a 1 0 0
chr1:61461551|61461674 hsa-miR-3175 1 0 0
chr1:61461551|61461674 hsa-miR-4322 1 0 0
chr1:61461551|61461674 hsa-miR-4321 1 0 0
chr1:61461551|61461674 hsa-miR-4270 1 1 0
chr1:61461551|61461674 hsa-miR-3621 1 0 0
chr1:61461551|61461674 hsa-miR-1268b 1 0 0
chr1:61461551|61461674 hsa-miR-4450 1 0 0
chr1:61461551|61461674 hsa-miR-4525 1 1 0
chr1:61461551|61461674 hsa-miR-4648 0 1 0
chr1:61461551|61461674 hsa-miR-4651 1 0 0
chr1:61461551|61461674 hsa-miR-4706 1 0 0
chr1:61461551|61461674 hsa-miR-5090 1 0 0
chr1:61461551|61461674 hsa-miR-5698 1 0 0
chr1:61461551|61461674 hsa-miR-6081 1 1 0
chr1:61461551|61461674 hsa-miR-6090 1 0 0
chr1:61461551|61461674 hsa-miR-6131 1 0 0
chr1:61461551|61461674 hsa-miR-6734-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6747-5p 1 0 0
chr1:61461551|61461674 hsa-miR-7106-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6825-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6894-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6728-5p 1 0 0
chr1:61461551|61461674 hsa-miR-5187-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6757-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6867-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6759-5p 1 0 0
chr1:61461551|61461674 hsa-miR-8069 1 0 0
chr1:61461551|61461674 hsa-miR-6742-5p 1 0 0
chr1:61461551|61461674 hsa-miR-3151-5p 1 0 0
chr1:61461551|61461674 hsa-miR-1292-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6796-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6732-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6805-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6827-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6798-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6760-5p 0 1 0
chr1:61461551|61461674 hsa-miR-6782-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6810-5p 1 0 0
chr1:61461551|61461674 hsa-miR-7109-5p 1 0 0
chr1:61461551|61461674 hsa-miR-885-3p 1 0 0
chr1:61461551|61461674 hsa-miR-4787-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6824-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6789-5p 1 0 0
chr1:61461551|61461674 hsa-miR-3162-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6802-5p 1 0 0
chr1:61461551|61461674 hsa-miR-5010-5p 1 1 0
chr1:61461551|61461674 hsa-miR-423-5p 1 0 0
chr1:61461551|61461674 hsa-miR-7152-3p 1 0 0
chr1:61461551|61461674 hsa-miR-4773 0 1 0
chr1:61461551|61461674 hsa-miR-4774-5p 1 0 0
chr1:61461551|61461674 hsa-miR-7113-5p 1 1 0
chr1:61461551|61461674 hsa-miR-155-5p 0 1 0
chr1:61461551|61461674 hsa-miR-1233-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6769b-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6778-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6812-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6870-5p 1 0 0
chr1:61461551|61461674 hsa-miR-1343-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6726-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6737-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6743-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6752-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6754-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6756-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6803-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6819-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6842-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6851-5p 1 0 0
chr1:61461551|61461674 hsa-miR-7110-5p 1 1 0
chr1:61461551|61461674 hsa-miR-10401-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6751-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6763-5p 1 1 0
chr1:61461551|61461674 hsa-miR-7111-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4728-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6780b-5p 1 0 0
chr1:61461551|61461674 hsa-miR-1237-5p 1 0 0
chr1:61461551|61461674 hsa-miR-328-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4725-3p 1 0 0
chr1:61461551|61461674 hsa-miR-4745-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6735-5p 1 0 0
chr1:61461551|61461674 hsa-miR-675-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6777-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6794-5p 1 1 0
chr1:61461551|61461674 hsa-miR-6795-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6846-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6848-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6883-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6887-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4723-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6885-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4758-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4769-5p 1 0 0
chr1:61461551|61461674 hsa-miR-6731-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4665-5p 1 0 0
chr1:61461551|61461674 hsa-miR-4472 1 0 0
chr1:61461551|61461674 hsa-miR-4716-3p 1 1 0
chr1:61461551|61461674 hsa-miR-6766-5p 0 1 0
chr1:61461551|61461674 hsa-miR-4667-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:61461551|61461674
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MFSRPAVGGPPYLSKHFRYLLPTYHPPN
Nucleotide Sequence CTGTTCTCACGACCAGCTGTGGGTGGTCCCCCTTATCTTTCTAAGCATTTCCGCTATCTGCTCCCCACATACCATCCCCCTAAT
CircID chr1:61461551|61461674
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MRSHPHTLSPCSHDQLWVVPLIFLSISAICSPHTIPL
Nucleotide Sequence ATGAGGTCCCACCCCCACACACTGTCTCCCTGTTCTCACGACCAGCTGTGGGTGGTCCCCCTTATCTTTCTAAGCATTTCCGCTATCTGCTCCCCACATACCATCCCCCTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab