CircNet

General Information

circRNA Basic Information

CircID	chr1:61827422\|61990364
Strand	+
CircType	exon
Host Gene	ENSG00000132849.19;
Algorism	find_circ;CIRI2;CIRC
Sequence	AGGCAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTCCTTATAAAGCTCTGACTGATGACAGTGATGAAAATGAAGAAGAAGATGCCTTTACCGACCAAAAAATCAGACAAAGATATGCAGATCTGCCTGGAGAACTGCACATTATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGACCGATCACGCATGAGCATATTTGTGGTGGGAATTAACCCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGTATTGGAGATGAACTCTTAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:61827422\|61990364	hsa-miR-143-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:61827422\|61990364
ORF Type	ORF1
Protein Length	91
Nucleotide Length	273
Protein Sequence	MKLPPPYKALTDDSDENEEEDAFTDQKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLE
Nucleotide Sequence	ATGAAACTTCCTCCTCCTTATAAAGCTCTGACTGATGACAGTGATGAAAATGAAGAAGAAGATGCCTTTACCGACCAAAAAATCAGACAAAGATATGCAGATCTGCCTGGAGAACTGCACATTATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGACCGATCACGCATGAGCATATTTGTGGTGGGAATTAACCCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGTATTGGAGATGAACTCTTAGAG

CircID	chr1:61827422\|61990364
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	MLMRDRSLLPARLSPSPFLSFSSSIMCSSPGRSAYLCLIFWSVKASSSSFSSLSSVRAL*
Nucleotide Sequence	ATGCTCATGCGTGATCGGTCTTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATAATGTGCAGTTCTCCAGGCAGATCTGCATATCTTTGTCTGATTTTTTGGTCGGTAAAGGCATCTTCTTCTTCATTTTCATCACTGTCATCAGTCAGAGCTTTATAA

CircID	chr1:61827422\|61990364
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	MTVMKMKKKMPLPTKKSDKDMQICLENCTLLNLKKIRMDLDSALLVIKTDHA*
Nucleotide Sequence	ATGACAGTGATGAAAATGAAGAAGAAGATGCCTTTACCGACCAAAAAATCAGACAAAGATATGCAGATCTGCCTGGAGAACTGCACATTATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGACCGATCACGCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:61827422\|61990364	ELAVL1	2	3	0
chr1:61827422\|61990364	SF3B4	2	0	0
chr1:61827422\|61990364	PRPF8	0	1	1
chr1:61827422\|61990364	UPF1	1	0	0
chr1:61827422\|61990364	TAF15	0	2	0
chr1:61827422\|61990364	FMR1	0	0	5
chr1:61827422\|61990364	DGCR8	0	0	1
chr1:61827422\|61990364	CPSF7	0	1	0
chr1:61827422\|61990364	SRSF1	0	0	2
chr1:61827422\|61990364	NOP58	0	1	1
chr1:61827422\|61990364	SRSF3	0	1	0
chr1:61827422\|61990364	U2AF2	7	8	5
chr1:61827422\|61990364	SRSF9	0	0	2
chr1:61827422\|61990364	DDX54	1	2	10
chr1:61827422\|61990364	FIP1L1	0	1	0
chr1:61827422\|61990364	PTBP1	0	1	1
chr1:61827422\|61990364	HNRNPC	1	8	0
chr1:61827422\|61990364	HNRNPA1	0	2	0
chr1:61827422\|61990364	ACIN1	0	0	2
chr1:61827422\|61990364	IGF2BP2	0	0	1
chr1:61827422\|61990364	MBNL2	1	0	0
chr1:61827422\|61990364	BUD13	1	0	0
chr1:61827422\|61990364	CSTF2T	0	0	2
chr1:61827422\|61990364	TIA1	0	2	0
chr1:61827422\|61990364	EIF4A3	3	3	4
chr1:61827422\|61990364	FBL	1	0	1

CircRNA Information