CircRNA Information

General Information
circRNA Basic Information
CircID chr1:6591674|6591921
Strand +
CircType exon
Host Gene ENSG00000162413.15;
Algorism CIRI2;
Sequence CTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACCAGGCACCCTCTGGCACTGTTGCTTGCCCTGTGCCCTGGACCTTTTCCTGCCCTTCTCCTTCCTCTGCTCCCTTGGGGCTACCCCTTGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAGCCCCCCTGCCCTGTAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:6591674|6591921 hsa-miR-214-5p 0 0 1
chr1:6591674|6591921 hsa-miR-214-3p 0 0 1
chr1:6591674|6591921 hsa-miR-507 0 0 1
chr1:6591674|6591921 hsa-miR-557 0 1 1
chr1:6591674|6591921 hsa-miR-661 0 0 1
chr1:6591674|6591921 hsa-miR-665 0 1 1
chr1:6591674|6591921 hsa-miR-1234-3p 0 0 1
chr1:6591674|6591921 hsa-miR-1234 0 0 1
chr1:6591674|6591921 hsa-miR-671-5p 1 0 1
chr1:6591674|6591921 hsa-miR-296-5p 0 1 1
chr1:6591674|6591921 hsa-miR-512-3p 0 0 1
chr1:6591674|6591921 hsa-miR-423-5p 0 1 1
chr1:6591674|6591921 hsa-miR-513a-5p 0 0 1
chr1:6591674|6591921 hsa-miR-1207-5p 1 1 1
chr1:6591674|6591921 hsa-miR-125a-5p 0 0 1
chr1:6591674|6591921 hsa-miR-125b 0 0 1
chr1:6591674|6591921 hsa-miR-550 0 0 1
chr1:6591674|6591921 hsa-miR-220c 0 0 1
chr1:6591674|6591921 hsa-miR-1254 0 0 1
chr1:6591674|6591921 hsa-miR-184 1 0 0
chr1:6591674|6591921 hsa-miR-658 1 0 0
chr1:6591674|6591921 hsa-miR-762 1 0 0
chr1:6591674|6591921 hsa-miR-765 1 1 0
chr1:6591674|6591921 hsa-miR-920 1 0 0
chr1:6591674|6591921 hsa-miR-936 1 0 0
chr1:6591674|6591921 hsa-miR-3125 1 1 0
chr1:6591674|6591921 hsa-miR-3141 1 0 0
chr1:6591674|6591921 hsa-miR-3154 1 0 0
chr1:6591674|6591921 hsa-miR-3185 1 0 0
chr1:6591674|6591921 hsa-miR-4257 1 0 0
chr1:6591674|6591921 hsa-miR-4270 1 0 0
chr1:6591674|6591921 hsa-miR-4271 1 0 0
chr1:6591674|6591921 hsa-miR-3916 1 1 0
chr1:6591674|6591921 hsa-miR-3945 1 0 0
chr1:6591674|6591921 hsa-miR-4428 1 1 0
chr1:6591674|6591921 hsa-miR-4441 1 0 0
chr1:6591674|6591921 hsa-miR-4468 1 1 0
chr1:6591674|6591921 hsa-miR-4476 1 1 0
chr1:6591674|6591921 hsa-miR-4510 1 1 0
chr1:6591674|6591921 hsa-miR-4516 1 1 0
chr1:6591674|6591921 hsa-miR-4530 0 1 0
chr1:6591674|6591921 hsa-miR-4533 1 1 0
chr1:6591674|6591921 hsa-miR-4534 1 0 0
chr1:6591674|6591921 hsa-miR-4656 1 0 0
chr1:6591674|6591921 hsa-miR-4681 0 1 0
chr1:6591674|6591921 hsa-miR-4688 1 0 0
chr1:6591674|6591921 hsa-miR-4689 1 0 0
chr1:6591674|6591921 hsa-miR-4710 1 0 0
chr1:6591674|6591921 hsa-miR-4739 1 1 0
chr1:6591674|6591921 hsa-miR-4741 1 0 0
chr1:6591674|6591921 hsa-miR-4779 1 0 0
chr1:6591674|6591921 hsa-miR-5090 1 0 0
chr1:6591674|6591921 hsa-miR-5192 1 0 0
chr1:6591674|6591921 hsa-miR-5703 1 1 0
chr1:6591674|6591921 hsa-miR-6081 1 1 0
chr1:6591674|6591921 hsa-miR-6090 1 0 0
chr1:6591674|6591921 hsa-miR-6124 1 1 0
chr1:6591674|6591921 hsa-miR-6127 1 1 0
chr1:6591674|6591921 hsa-miR-6129 1 1 0
chr1:6591674|6591921 hsa-miR-6133 1 1 0
chr1:6591674|6591921 hsa-miR-6165 1 0 0
chr1:6591674|6591921 hsa-miR-7977 0 1 0
chr1:6591674|6591921 hsa-miR-12115 1 0 0
chr1:6591674|6591921 hsa-miR-12118 1 0 0
chr1:6591674|6591921 hsa-miR-12122 0 1 0
chr1:6591674|6591921 hsa-miR-150-3p 1 0 0
chr1:6591674|6591921 hsa-miR-4433b-3p 1 0 0
chr1:6591674|6591921 hsa-miR-4700-3p 0 1 0
chr1:6591674|6591921 hsa-miR-3157-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6765-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6861-5p 1 0 0
chr1:6591674|6591921 hsa-miR-7106-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6894-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1972 1 1 0
chr1:6591674|6591921 hsa-miR-6799-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6510-5p 1 1 0
chr1:6591674|6591921 hsa-miR-766-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6804-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6873-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6880-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4695-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6746-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4722-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4755-3p 0 1 0
chr1:6591674|6591921 hsa-miR-6820-5p 1 0 0
chr1:6591674|6591921 hsa-miR-874-5p 0 1 0
chr1:6591674|6591921 hsa-miR-3928-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6727-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6806-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6721-5p 1 1 0
chr1:6591674|6591921 hsa-miR-197-5p 1 0 0
chr1:6591674|6591921 hsa-miR-3605-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6716-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1292-5p 1 0 0
chr1:6591674|6591921 hsa-miR-503-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6772-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6732-5p 1 0 0
chr1:6591674|6591921 hsa-miR-3190-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6805-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6827-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6798-5p 0 1 0
chr1:6591674|6591921 hsa-miR-486-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6760-5p 1 0 0
chr1:6591674|6591921 hsa-miR-2467-3p 1 1 0
chr1:6591674|6591921 hsa-miR-6786-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1226-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1247-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1229-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6784-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4640-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6753-5p 1 0 0
chr1:6591674|6591921 hsa-miR-885-3p 1 0 0
chr1:6591674|6591921 hsa-miR-619-3p 0 1 0
chr1:6591674|6591921 hsa-miR-1228-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4690-5p 1 1 0
chr1:6591674|6591921 hsa-miR-877-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4732-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6847-5p 1 1 0
chr1:6591674|6591921 hsa-miR-3202 1 0 0
chr1:6591674|6591921 hsa-miR-4638-3p 0 1 0
chr1:6591674|6591921 hsa-miR-5196-3p 0 1 0
chr1:6591674|6591921 hsa-miR-4446-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6824-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6789-5p 1 0 0
chr1:6591674|6591921 hsa-miR-3162-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6781-5p 1 0 0
chr1:6591674|6591921 hsa-miR-7112-5p 1 0 0
chr1:6591674|6591921 hsa-miR-7846-3p 1 0 0
chr1:6591674|6591921 hsa-let-7e-5p 1 0 0
chr1:6591674|6591921 hsa-miR-7106-3p 0 1 0
chr1:6591674|6591921 hsa-miR-6801-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6814-5p 0 1 0
chr1:6591674|6591921 hsa-miR-670-5p 0 1 0
chr1:6591674|6591921 hsa-miR-3680-3p 1 0 0
chr1:6591674|6591921 hsa-miR-5699-5p 0 1 0
chr1:6591674|6591921 hsa-miR-5581-3p 0 1 0
chr1:6591674|6591921 hsa-miR-10400-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1233-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4763-3p 1 1 0
chr1:6591674|6591921 hsa-miR-6778-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6865-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6870-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6775-5p 1 1 0
chr1:6591674|6591921 hsa-miR-1343-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6726-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6743-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6752-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6754-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6803-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6851-5p 1 0 0
chr1:6591674|6591921 hsa-miR-11181-3p 1 1 0
chr1:6591674|6591921 hsa-miR-1249-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6722-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6788-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6797-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6875-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6879-5p 1 1 0
chr1:6591674|6591921 hsa-miR-7111-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4728-5p 1 1 0
chr1:6591674|6591921 hsa-miR-5196-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6780b-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6836-5p 1 0 0
chr1:6591674|6591921 hsa-miR-10526-3p 1 0 0
chr1:6591674|6591921 hsa-miR-1237-5p 1 0 0
chr1:6591674|6591921 hsa-miR-1909-3p 1 0 0
chr1:6591674|6591921 hsa-miR-328-5p 1 1 0
chr1:6591674|6591921 hsa-miR-4632-5p 1 1 0
chr1:6591674|6591921 hsa-miR-4649-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4685-5p 1 1 0
chr1:6591674|6591921 hsa-miR-4725-3p 1 0 0
chr1:6591674|6591921 hsa-miR-4726-5p 1 1 0
chr1:6591674|6591921 hsa-miR-4745-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4749-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6729-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6735-5p 1 1 0
chr1:6591674|6591921 hsa-miR-675-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6846-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6848-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6858-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6887-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4436b-3p 1 1 0
chr1:6591674|6591921 hsa-miR-6845-5p 1 0 0
chr1:6591674|6591921 hsa-miR-939-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4758-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6758-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6856-5p 1 0 0
chr1:6591674|6591921 hsa-miR-7843-5p 1 1 0
chr1:6591674|6591921 hsa-miR-3116 0 1 0
chr1:6591674|6591921 hsa-miR-3173-3p 1 0 0
chr1:6591674|6591921 hsa-miR-4747-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6876-5p 1 1 0
chr1:6591674|6591921 hsa-miR-6891-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4716-3p 1 0 0
chr1:6591674|6591921 hsa-miR-6750-5p 1 0 0
chr1:6591674|6591921 hsa-miR-4667-5p 1 0 0
chr1:6591674|6591921 hsa-miR-5591-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6724-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6791-5p 1 0 0
chr1:6591674|6591921 hsa-miR-550a-5p 1 0 0
chr1:6591674|6591921 hsa-miR-6762-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6756-3p 1 0 0
chr1:6591674|6591921 hsa-miR-10400-3p 1 1 0
chr1:6591674|6591921 hsa-miR-6837-5p 0 1 0
chr1:6591674|6591921 hsa-miR-6859-5p 1 1 0
chr1:6591674|6591921 hsa-miR-3619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:6591674|6591921
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence LLCWEGRGWGPSTVQACWGLAGSPVGSMEHAAGLPVTRHPLALLLALCPGPFPALLLPLLPWGYPLAPPGLCKLPQGAPLPC
Nucleotide Sequence CTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACCAGGCACCCTCTGGCACTGTTGCTTGCCCTGTGCCCTGGACCTTTTCCTGCCCTTCTCCTTCCTCTGCTCCCTTGGGGCTACCCCTTGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAGCCCCCCTGCCCTGT
CircID chr1:6591674|6591921
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MPCALDLFLPFSFLCSLGATPWPLLVCANSLREPPCPV
Nucleotide Sequence TTGCCCTGTGCCCTGGACCTTTTCCTGCCCTTCTCCTTCCTCTGCTCCCTTGGGGCTACCCCTTGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAGCCCCCCTGCCCTGTA
CircID chr1:6591674|6591921
ORF Type ORF3
Protein Length 79
Nucleotide Length 240
Protein Sequence MGRPRMGAQHCPGLLGPGWESCGQHGTCSWASCDQAPSGTVACPVPWTFSCPSPSSAPLGLPLGPSWSVQTPSGSPPAL
Nucleotide Sequence CTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACCAGGCACCCTCTGGCACTGTTGCTTGCCCTGTGCCCTGGACCTTTTCCTGCCCTTCTCCTTCCTCTGCTCCCTTGGGGCTACCCCTTGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAGCCCCCCTGCCCTGTAG
CircID chr1:6591674|6591921
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MVTGSPAACSMLPTGLPARPQQAWTVLGPHPRPSQHS
Nucleotide Sequence CTGGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTGGACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGC
CircID chr1:6591674|6591921
ORF Type ORF5
Protein Length 31
Nucleotide Length 93
Protein Sequence MHVPCCPQDSQPGPSRPGQCWAPILGLPSTA
Nucleotide Sequence CTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTGGACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCA
CircID chr1:6591674|6591921
ORF Type ORF6
Protein Length 76
Nucleotide Length 228
Protein Sequence MREFAQTRRGQGVAPREQRKEKGRKRSRAQGKQQCQRVPGHRKPSCMFHAAHRTPSQAPAGLDSAGPPSSAFPAQQ
Nucleotide Sequence CTGAGGGAGTTTGCACAGACCAGGAGGGGCCAAGGGGTAGCCCCAAGGGAGCAGAGGAAGGAGAAGGGCAGGAAAAGGTCCAGGGCACAGGGCAAGCAACAGTGCCAGAGGGTGCCTGGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTGGACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab