CircRNA Information

General Information
circRNA Basic Information
CircID chr1:71070827|71070996
Strand -
CircType exon
Host Gene ENSG00000132485.11;
Algorism CIRI2;
Sequence CTGGACCTAGACCTTGAACTTGAGGGGGAGGATGAGCGTGATGAAGATCGTGAATGTGAAGATCGAGACTTTGAGCGACTTCGTCTATTAGATTTCTTTTTATTACTATCTTCTTCTTCACTGGCATCAAGATTATATTTTGAGAGATCAGCGTCATCTTCATCCTCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:71070827|71070996
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence LDLDLELEGEDERDEDRECEDRDFERLRLLDFFLLLSSSSLASRLYFERSASSSSS
Nucleotide Sequence CTGGACCTAGACCTTGAACTTGAGGGGGAGGATGAGCGTGATGAAGATCGTGAATGTGAAGATCGAGACTTTGAGCGACTTCGTCTATTAGATTTCTTTTTATTACTATCTTCTTCTTCACTGGCATCAAGATTATATTTTGAGAGATCAGCGTCATCTTCATCCTCA

CircID chr1:71070827|71070996
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MNLRGRMSVMKIVNVKIETLSDFVY
Nucleotide Sequence TTGAACTTGAGGGGGAGGATGAGCGTGATGAAGATCGTGAATGTGAAGATCGAGACTTTGAGCGACTTCGTCTATTAG

CircID chr1:71070827|71070996
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MRMKMTLISQNIILMPVKKKIVIKRNLIDEVAQSLDLHIHDLHHAHPPPQVQGLGP
Nucleotide Sequence ATGAGGATGAAGATGACGCTGATCTCTCAAAATATAATCTTGATGCCAGTGAAGAAGAAGATAGTAATAAAAAGAAATCTAATAGACGAAGTCGCTCAAAGTCTCGATCTTCACATTCACGATCTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCTAGGTCCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites