CircRNA Information

General Information
circRNA Basic Information
CircID chr1:7780832|7781021
Strand -
CircType exon
Host Gene ENSG00000049245.11;
Algorism CIRI2;
Sequence CAGAGACCTTTGCTTTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAATGCTGGAAGCAGAAACTTTGTCATCGGAAAAACTTTTCTTGTATGCATGAGACTCAACATCAGGATCCACAGCTTAAAGATGGGAATTCAGGTATGAAAGAAAACAGGCAAGGAGGCACTGAGGGAGAAAGACACAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:7780832|7781021 hsa-miR-148a-5p 0 0 1
chr1:7780832|7781021 hsa-miR-148a-3p 0 0 1
chr1:7780832|7781021 hsa-miR-152-5p 0 0 1
chr1:7780832|7781021 hsa-miR-152-3p 0 0 1
chr1:7780832|7781021 hsa-miR-381-5p 0 0 1
chr1:7780832|7781021 hsa-miR-381-3p 0 0 1
chr1:7780832|7781021 hsa-miR-148b-5p 0 0 1
chr1:7780832|7781021 hsa-miR-148b-3p 0 0 1
chr1:7780832|7781021 hsa-miR-511-5p 0 0 1
chr1:7780832|7781021 hsa-miR-511-3p 0 0 1
chr1:7780832|7781021 hsa-miR-519e-5p 0 0 1
chr1:7780832|7781021 hsa-miR-519e-3p 0 0 1
chr1:7780832|7781021 hsa-miR-561-5p 0 0 1
chr1:7780832|7781021 hsa-miR-561-3p 0 0 1
chr1:7780832|7781021 hsa-miR-593-5p 0 0 1
chr1:7780832|7781021 hsa-miR-593-3p 0 0 1
chr1:7780832|7781021 hsa-miR-627-5p 0 0 1
chr1:7780832|7781021 hsa-miR-627-3p 0 0 1
chr1:7780832|7781021 hsa-miR-421 0 1 1
chr1:7780832|7781021 hsa-miR-300 0 0 1
chr1:7780832|7781021 hsa-miR-924 0 0 1
chr1:7780832|7781021 hsa-miR-1179 0 1 1
chr1:7780832|7781021 hsa-miR-1205 0 0 1
chr1:7780832|7781021 hsa-miR-1184 0 0 1
chr1:7780832|7781021 hsa-miR-330-3p 0 0 1
chr1:7780832|7781021 hsa-miR-502-5p 0 0 1
chr1:7780832|7781021 hsa-miR-338-3p 0 0 1
chr1:7780832|7781021 hsa-miR-485-3p 0 0 1
chr1:7780832|7781021 hsa-miR-515-3p 0 1 1
chr1:7780832|7781021 hsa-miR-516a-3p 0 0 1
chr1:7780832|7781021 hsa-miR-544 0 0 1
chr1:7780832|7781021 hsa-miR-3911 1 1 0
chr1:7780832|7781021 hsa-miR-4452 0 1 0
chr1:7780832|7781021 hsa-miR-4469 0 1 0
chr1:7780832|7781021 hsa-miR-4752 0 1 0
chr1:7780832|7781021 hsa-miR-6875-3p 1 0 0
chr1:7780832|7781021 hsa-miR-3682-3p 0 1 0
chr1:7780832|7781021 hsa-miR-7110-3p 1 0 0
chr1:7780832|7781021 hsa-miR-4697-3p 0 1 0
chr1:7780832|7781021 hsa-miR-6514-3p 0 1 0
chr1:7780832|7781021 hsa-miR-7113-3p 1 0 0
chr1:7780832|7781021 hsa-miR-7111-3p 1 0 0
chr1:7780832|7781021 hsa-miR-6830-3p 1 1 0
chr1:7780832|7781021 hsa-miR-211-5p 1 0 0
chr1:7780832|7781021 hsa-miR-6867-3p 0 1 0
chr1:7780832|7781021 hsa-miR-6794-3p 1 0 0
chr1:7780832|7781021 hsa-miR-204-5p 1 0 0
chr1:7780832|7781021 hsa-miR-6885-3p 0 1 0
chr1:7780832|7781021 hsa-miR-550b-3p 1 0 0
chr1:7780832|7781021 hsa-miR-4685-3p 1 0 0
chr1:7780832|7781021 hsa-miR-6791-3p 0 1 0
chr1:7780832|7781021 hsa-miR-550a-3p 1 0 0
chr1:7780832|7781021 hsa-miR-7157-5p 0 1 0
chr1:7780832|7781021 hsa-miR-3140-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:7780832|7781021
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MHETQHQDPQLKDGNSGMKENRQGGTEGERHR
Nucleotide Sequence ATGCATGAGACTCAACATCAGGATCCACAGCTTAAAGATGGGAATTCAGGTATGAAAGAAAACAGGCAAGGAGGCACTGAGGGAGAAAGACACAGA

CircID chr1:7780832|7781021
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MISSTAENAVDGNAGSRNFVIGKTFLVCMRLNIRIHSLKMGIQV
Nucleotide Sequence TTGATATCATCAACTGCAGAGAATGCTGTTGATGGGAATGCTGGAAGCAGAAACTTTGTCATCGGAAAAACTTTTCTTGTATGCATGAGACTCAACATCAGGATCCACAGCTTAAAGATGGGAATTCAGGTATGA

CircID chr1:7780832|7781021
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MWILMLSLMHTRKVFPMTKFLLPAFPSTAFSAVDDIKAKVS
Nucleotide Sequence CTGTGGATCCTGATGTTGAGTCTCATGCATACAAGAAAAGTTTTTCCGATGACAAAGTTTCTGCTTCCAGCATTCCCATCAACAGCATTCTCTGCAGTTGATGATATCAAAGCAAAGGTCTCT

CircID chr1:7780832|7781021
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence LCLSPSVPPCLFSFIPEFPSLSCGS
Nucleotide Sequence CTGTGTCTTTCTCCCTCAGTGCCTCCTTGCCTGTTTTCTTTCATACCTGAATTCCCATCTTTAAGCTGTGGATCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites