CircNet

General Information

circRNA Basic Information

CircID	chr1:85190057\|85190752
Strand	-
CircType	exon
Host Gene	ENSG00000097096.8;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGATATTCAGACCACACGGTCAAATGGAATGAATCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGACAGTCCCATGTTGAAATCTCCTTTTGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:85190057\|85190752
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MGLSSTIIPSCVLCPSFCLYCCTNSVEWAGCIGFIPFDRVV*
Nucleotide Sequence	ATGGGACTGTCCTCCACCATTATACCTTCTTGTGTCTTGTGTCCTAGCTTTTGCTTGTACTGCTGCACAAATTCTGTGGAATGGGCAGGATGTATAGGATTCATTCCATTTGACCGTGTGGTCTGA

CircID	chr1:85190057\|85190752
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MNPIHPAHSTEFVQQYKQKLGHKTQEGIMVEDSPMLKSPFA
Nucleotide Sequence	ATGAATCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGACAGTCCCATGTTGAAATCTCCTTTTGCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:85190057\|85190752	KHSRP	1	1	0
chr1:85190057\|85190752	ELAVL1	13	9	0
chr1:85190057\|85190752	PRPF8	0	1	1
chr1:85190057\|85190752	YTHDF1	0	0	1
chr1:85190057\|85190752	TAF15	0	1	0
chr1:85190057\|85190752	FMR1	0	1	2
chr1:85190057\|85190752	NUDT21	1	0	0
chr1:85190057\|85190752	FUS	1	1	0
chr1:85190057\|85190752	SRSF1	1	1	1
chr1:85190057\|85190752	SRSF3	0	1	0
chr1:85190057\|85190752	U2AF1	1	1	0
chr1:85190057\|85190752	U2AF2	5	8	0
chr1:85190057\|85190752	NOP56	0	2	0
chr1:85190057\|85190752	DDX54	0	0	5
chr1:85190057\|85190752	FIP1L1	1	1	0
chr1:85190057\|85190752	PTBP1	4	8	0
chr1:85190057\|85190752	HNRNPC	30	54	6
chr1:85190057\|85190752	TRA2A	0	0	1
chr1:85190057\|85190752	ZNF184	0	0	1
chr1:85190057\|85190752	ZC3H7B	1	0	0
chr1:85190057\|85190752	HNRNPA1	5	3	0
chr1:85190057\|85190752	LIN28B	2	0	0
chr1:85190057\|85190752	FXR1	0	0	1
chr1:85190057\|85190752	FXR2	0	0	2
chr1:85190057\|85190752	IGF2BP1	0	0	1
chr1:85190057\|85190752	IGF2BP2	0	1	2
chr1:85190057\|85190752	TARDBP	2	1	0
chr1:85190057\|85190752	BUD13	1	0	0
chr1:85190057\|85190752	SLTM	0	0	1
chr1:85190057\|85190752	CSTF2T	1	0	1
chr1:85190057\|85190752	CSTF2	3	0	0
chr1:85190057\|85190752	RNF219	0	1	0
chr1:85190057\|85190752	EIF4A3	2	1	2

CircRNA Information