CircRNA Information

General Information
circRNA Basic Information
CircID chr1:93552327|93552498
Strand -
CircType exon
Host Gene ENSG00000137942.15;
Algorism CIRI2;
Sequence AGGCACTTTAAACTGAACACCCCTTTTGGTTTTACCAAAGGTCTTCAGTAATTGTTCTTTTCTTTTTCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:93552327|93552498 hsa-miR-17-5p 0 0 1
chr1:93552327|93552498 hsa-miR-17-3p 0 0 1
chr1:93552327|93552498 hsa-miR-20a-5p 0 0 1
chr1:93552327|93552498 hsa-miR-20a-3p 0 0 1
chr1:93552327|93552498 hsa-miR-93-5p 0 0 1
chr1:93552327|93552498 hsa-miR-93-3p 0 0 1
chr1:93552327|93552498 hsa-miR-106a-5p 0 0 1
chr1:93552327|93552498 hsa-miR-106a-3p 0 0 1
chr1:93552327|93552498 hsa-miR-205-5p 0 0 1
chr1:93552327|93552498 hsa-miR-205-3p 0 0 1
chr1:93552327|93552498 hsa-miR-106b-5p 0 0 1
chr1:93552327|93552498 hsa-miR-106b-3p 0 0 1
chr1:93552327|93552498 hsa-miR-20b-5p 0 0 1
chr1:93552327|93552498 hsa-miR-20b-3p 0 0 1
chr1:93552327|93552498 hsa-miR-519e-5p 0 0 1
chr1:93552327|93552498 hsa-miR-519e-3p 0 0 1
chr1:93552327|93552498 hsa-miR-519d-5p 0 0 1
chr1:93552327|93552498 hsa-miR-519d-3p 0 0 1
chr1:93552327|93552498 hsa-miR-609 0 0 1
chr1:93552327|93552498 hsa-miR-618 0 1 1
chr1:93552327|93552498 hsa-miR-646 0 1 1
chr1:93552327|93552498 hsa-miR-421 0 0 1
chr1:93552327|93552498 hsa-miR-665 0 1 1
chr1:93552327|93552498 hsa-miR-873-5p 0 0 1
chr1:93552327|93552498 hsa-miR-873-3p 0 0 1
chr1:93552327|93552498 hsa-miR-1238-5p 0 0 1
chr1:93552327|93552498 hsa-miR-1238-3p 0 0 1
chr1:93552327|93552498 hsa-miR-361-3p 0 0 1
chr1:93552327|93552498 hsa-miR-515-3p 0 0 1
chr1:93552327|93552498 hsa-miR-455-3p 0 1 1
chr1:93552327|93552498 hsa-miR-9 0 0 1
chr1:93552327|93552498 hsa-miR-549 0 0 1
chr1:93552327|93552498 hsa-miR-765 0 1 0
chr1:93552327|93552498 hsa-miR-1913 1 0 0
chr1:93552327|93552498 hsa-miR-2278 0 1 0
chr1:93552327|93552498 hsa-miR-3128 0 1 0
chr1:93552327|93552498 hsa-miR-3936 0 1 0
chr1:93552327|93552498 hsa-miR-4644 0 1 0
chr1:93552327|93552498 hsa-miR-4779 0 1 0
chr1:93552327|93552498 hsa-miR-6749-3p 1 0 0
chr1:93552327|93552498 hsa-miR-6892-3p 1 0 0
chr1:93552327|93552498 hsa-miR-1301-3p 1 0 0
chr1:93552327|93552498 hsa-miR-4655-3p 1 0 0
chr1:93552327|93552498 hsa-miR-5584-5p 0 1 0
chr1:93552327|93552498 hsa-miR-4687-5p 1 0 0
chr1:93552327|93552498 hsa-miR-3675-3p 1 0 0
chr1:93552327|93552498 hsa-miR-5195-5p 1 0 0
chr1:93552327|93552498 hsa-miR-3179 0 1 0
chr1:93552327|93552498 hsa-miR-6800-3p 1 0 0
chr1:93552327|93552498 hsa-miR-6797-5p 0 1 0
chr1:93552327|93552498 hsa-miR-6739-5p 0 1 0
chr1:93552327|93552498 hsa-miR-3173-3p 0 1 0
chr1:93552327|93552498 hsa-miR-6829-3p 1 0 0
chr1:93552327|93552498 hsa-miR-4691-5p 1 0 0
chr1:93552327|93552498 hsa-miR-6876-3p 1 0 0
chr1:93552327|93552498 hsa-miR-505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:93552327|93552498
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MVLPKVFSNCSFLFPPGLQVPEEGF
Nucleotide Sequence TTGGTTTTACCAAAGGTCTTCAGTAATTGTTCTTTTCTTTTTCCTCCTGGACTGCAGGTTCCTGAAGAGGGTTTCTGA

CircID chr1:93552327|93552498
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MDCRFLKRVSEEMGKMLKEVTCSCFWGRVLELS
Nucleotide Sequence CTGGACTGCAGGTTCCTGAAGAGGGTTTCTGAGGAAATGGGCAAGATGTTGAAGGAGGTTACATGCAGCTGCTTTTGGGGGAGGGTATTAGAGTTGTCA

CircID chr1:93552327|93552498
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MHVTSFNILPISSETLFRNLQSRRKKKRTITEDLW
Nucleotide Sequence CTGCATGTAACCTCCTTCAACATCTTGCCCATTTCCTCAGAAACCCTCTTCAGGAACCTGCAGTCCAGGAGGAAAAAGAAAAGAACAATTACTGAAGACCTTTGGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites