CircNet

General Information

circRNA Basic Information

CircID	chr1:9603028\|9603194
Strand	+
CircType	exon
Host Gene	ENSG00000188807.11;
Algorism	CIRI2;
Sequence	CTGAGTCGGAGGACAGAGTGGCGCTGGGCCATGGTGAGCAGGCACCTGCAGAGGCTCGTGACAGGTCAGGGAGGGAAAGGATGACAACGACCTGATGTCACTGAAGGCCTGCATACCCTGGGCCCCTTACCCTTGGAAAAGCTCAGATTCCCCAAGGTCAGCACAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:9603028\|9603194	hsa-miR-489-5p	0	0	1
chr1:9603028\|9603194	hsa-miR-489-3p	0	0	1
chr1:9603028\|9603194	hsa-miR-555	0	0	1
chr1:9603028\|9603194	hsa-miR-631	0	0	1
chr1:9603028\|9603194	hsa-miR-657	0	0	1
chr1:9603028\|9603194	hsa-miR-1178-5p	0	0	1
chr1:9603028\|9603194	hsa-miR-1178-3p	0	0	1
chr1:9603028\|9603194	hsa-miR-1205	0	1	1
chr1:9603028\|9603194	hsa-miR-1184	0	0	1
chr1:9603028\|9603194	hsa-miR-501-5p	0	1	1
chr1:9603028\|9603194	hsa-miR-767-3p	0	1	1
chr1:9603028\|9603194	hsa-miR-628-5p	0	0	1
chr1:9603028\|9603194	hsa-miR-125a-5p	0	0	1
chr1:9603028\|9603194	hsa-miR-125b	0	0	1
chr1:9603028\|9603194	hsa-miR-550	0	0	1
chr1:9603028\|9603194	hsa-miR-642	0	0	1
chr1:9603028\|9603194	hsa-miR-636	1	1	0
chr1:9603028\|9603194	hsa-miR-764	0	1	0
chr1:9603028\|9603194	hsa-miR-1538	1	1	0
chr1:9603028\|9603194	hsa-miR-4437	1	1	0
chr1:9603028\|9603194	hsa-miR-4656	1	0	0
chr1:9603028\|9603194	hsa-miR-4663	1	0	0
chr1:9603028\|9603194	hsa-miR-4754	1	0	0
chr1:9603028\|9603194	hsa-miR-9718	1	1	0
chr1:9603028\|9603194	hsa-miR-12126	0	1	0
chr1:9603028\|9603194	hsa-miR-3187-3p	1	0	0
chr1:9603028\|9603194	hsa-miR-4728-3p	1	0	0
chr1:9603028\|9603194	hsa-miR-6716-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-7113-3p	1	1	0
chr1:9603028\|9603194	hsa-miR-4446-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-3189-3p	1	0	0
chr1:9603028\|9603194	hsa-miR-4732-3p	1	1	0
chr1:9603028\|9603194	hsa-miR-208a-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-6778-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-6814-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-6773-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-6755-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-3664-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-6813-5p	1	1	0
chr1:9603028\|9603194	hsa-miR-6722-3p	1	0	0
chr1:9603028\|9603194	hsa-miR-6774-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-4649-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-6889-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-939-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-1199-5p	1	0	0
chr1:9603028\|9603194	hsa-miR-1271-3p	1	1	0
chr1:9603028\|9603194	hsa-miR-5008-3p	1	0	0
chr1:9603028\|9603194	hsa-miR-6773-5p	1	1	0
chr1:9603028\|9603194	hsa-miR-6877-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-6511a-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-6823-3p	0	1	0
chr1:9603028\|9603194	hsa-miR-10394-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-6764-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-6811-5p	0	1	0
chr1:9603028\|9603194	hsa-miR-1245b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:9603028\|9603194
ORF Type	ORF1
Protein Length	27
Nucleotide Length	84
Protein Sequence	LSRRTEWRWAMVSRHLQRLVTGQGGKG
Nucleotide Sequence	CTGAGTCGGAGGACAGAGTGGCGCTGGGCCATGGTGAGCAGGCACCTGCAGAGGCTCGTGACAGGTCAGGGAGGGAAAGGATGA

CircID	chr1:9603028\|9603194
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MMSLKACIPWAPYPWKSSDSPRSAQ
Nucleotide Sequence	CTGATGTCACTGAAGGCCTGCATACCCTGGGCCCCTTACCCTTGGAAAAGCTCAGATTCCCCAAGGTCAGCACAG

CircID	chr1:9603028\|9603194
ORF Type	ORF3
Protein Length	31
Nucleotide Length	96
Protein Sequence	MTLGNLSFSKGKGPRVCRPSVTSGRCHPFPP
Nucleotide Sequence	CTGACCTTGGGGAATCTGAGCTTTTCCAAGGGTAAGGGGCCCAGGGTATGCAGGCCTTCAGTGACATCAGGTCGTTGTCATCCTTTCCCTCCCTGA

CircID	chr1:9603028\|9603194
ORF Type	ORF4
Protein Length	38
Nucleotide Length	114
Protein Sequence	MQAFSDIRSLSSFPSLTCHEPLQVPAHHGPAPLCPPTQ
Nucleotide Sequence	ATGCAGGCCTTCAGTGACATCAGGTCGTTGTCATCCTTTCCCTCCCTGACCTGTCACGAGCCTCTGCAGGTGCCTGCTCACCATGGCCCAGCGCCACTCTGTCCTCCGACTCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information