CircRNA Information

General Information
circRNA Basic Information
CircID chr20:10057136|10057292
Strand -
CircType exon
Host Gene ENSG00000132623.14;
Algorism CIRI2;
Sequence AGCTCTGTCAGTCACGTATGGATTAAACCCCTTTCCTCTAACCTCCTCCCTCTCTTTCCAACCTTGGAGGGACCTTCCACAGGAGCCAGTTAGGGAGGAGAAGGGAAGAGAGAGAATGAAGCAGGTAACCAGGCCCACCCCTCTGGAGGAGACAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:10057136|10057292 hsa-miR-204-5p 0 0 1
chr20:10057136|10057292 hsa-miR-204-3p 0 0 1
chr20:10057136|10057292 hsa-miR-211-5p 0 0 1
chr20:10057136|10057292 hsa-miR-211-3p 0 0 1
chr20:10057136|10057292 hsa-miR-134-5p 0 0 1
chr20:10057136|10057292 hsa-miR-134-3p 0 0 1
chr20:10057136|10057292 hsa-miR-149-5p 0 0 1
chr20:10057136|10057292 hsa-miR-149-3p 0 0 1
chr20:10057136|10057292 hsa-miR-493-5p 0 0 1
chr20:10057136|10057292 hsa-miR-493-3p 0 0 1
chr20:10057136|10057292 hsa-miR-608 1 1 1
chr20:10057136|10057292 hsa-miR-623 0 0 1
chr20:10057136|10057292 hsa-miR-629-5p 0 0 1
chr20:10057136|10057292 hsa-miR-629-3p 0 0 1
chr20:10057136|10057292 hsa-miR-1298-5p 0 0 1
chr20:10057136|10057292 hsa-miR-1298-3p 0 0 1
chr20:10057136|10057292 hsa-miR-765 0 1 1
chr20:10057136|10057292 hsa-miR-892b 0 1 1
chr20:10057136|10057292 hsa-miR-541-5p 0 0 1
chr20:10057136|10057292 hsa-miR-541-3p 0 0 1
chr20:10057136|10057292 hsa-miR-877-5p 0 0 1
chr20:10057136|10057292 hsa-miR-877-3p 0 0 1
chr20:10057136|10057292 hsa-miR-1236-5p 0 0 1
chr20:10057136|10057292 hsa-miR-1236-3p 0 0 1
chr20:10057136|10057292 hsa-miR-1321 0 0 1
chr20:10057136|10057292 hsa-miR-654-5p 1 0 1
chr20:10057136|10057292 hsa-miR-525-5p 0 1 1
chr20:10057136|10057292 hsa-miR-409-5p 0 0 1
chr20:10057136|10057292 hsa-miR-520a-5p 0 1 1
chr20:10057136|10057292 hsa-miR-582-3p 0 0 1
chr20:10057136|10057292 hsa-miR-661 1 0 0
chr20:10057136|10057292 hsa-miR-762 1 0 0
chr20:10057136|10057292 hsa-miR-1293 1 0 0
chr20:10057136|10057292 hsa-miR-4281 1 0 0
chr20:10057136|10057292 hsa-miR-4279 0 1 0
chr20:10057136|10057292 hsa-miR-3936 1 0 0
chr20:10057136|10057292 hsa-miR-4488 1 0 0
chr20:10057136|10057292 hsa-miR-4510 0 1 0
chr20:10057136|10057292 hsa-miR-4651 1 1 0
chr20:10057136|10057292 hsa-miR-4739 1 1 0
chr20:10057136|10057292 hsa-miR-5194 1 0 0
chr20:10057136|10057292 hsa-miR-6086 0 1 0
chr20:10057136|10057292 hsa-miR-6127 0 1 0
chr20:10057136|10057292 hsa-miR-6133 0 1 0
chr20:10057136|10057292 hsa-miR-6745 1 0 0
chr20:10057136|10057292 hsa-miR-6749-3p 0 1 0
chr20:10057136|10057292 hsa-miR-7106-5p 0 1 0
chr20:10057136|10057292 hsa-miR-7114-5p 0 1 0
chr20:10057136|10057292 hsa-miR-6762-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6873-3p 0 1 0
chr20:10057136|10057292 hsa-miR-7110-3p 0 1 0
chr20:10057136|10057292 hsa-miR-6742-5p 1 0 0
chr20:10057136|10057292 hsa-miR-1292-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6748-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6732-5p 1 0 0
chr20:10057136|10057292 hsa-miR-3190-3p 0 1 0
chr20:10057136|10057292 hsa-miR-6798-5p 1 1 0
chr20:10057136|10057292 hsa-miR-4753-3p 0 1 0
chr20:10057136|10057292 hsa-miR-6782-5p 1 1 0
chr20:10057136|10057292 hsa-miR-6735-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6894-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6771-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6809-3p 0 1 0
chr20:10057136|10057292 hsa-miR-7111-3p 0 1 0
chr20:10057136|10057292 hsa-miR-4787-5p 1 0 0
chr20:10057136|10057292 hsa-miR-194-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6734-3p 0 1 0
chr20:10057136|10057292 hsa-miR-3179 1 1 0
chr20:10057136|10057292 hsa-miR-6816-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6737-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6752-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6756-5p 1 1 0
chr20:10057136|10057292 hsa-miR-6803-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6842-5p 1 0 0
chr20:10057136|10057292 hsa-miR-1249-5p 0 1 0
chr20:10057136|10057292 hsa-miR-6722-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6751-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6797-5p 0 1 0
chr20:10057136|10057292 hsa-miR-320a-5p 1 1 0
chr20:10057136|10057292 hsa-miR-4685-3p 0 1 0
chr20:10057136|10057292 hsa-miR-4755-5p 0 1 0
chr20:10057136|10057292 hsa-miR-4728-5p 1 0 0
chr20:10057136|10057292 hsa-miR-5196-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6848-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6758-5p 0 1 0
chr20:10057136|10057292 hsa-miR-1914-3p 1 0 0
chr20:10057136|10057292 hsa-miR-6855-5p 1 0 0
chr20:10057136|10057292 hsa-miR-6785-5p 1 0 0
chr20:10057136|10057292 hsa-miR-3184-5p 1 0 0
chr20:10057136|10057292 hsa-miR-7107-3p 1 0 0
chr20:10057136|10057292 hsa-miR-4691-5p 0 1 0
chr20:10057136|10057292 hsa-miR-4768-5p 0 1 0
chr20:10057136|10057292 hsa-miR-5006-3p 0 1 0
chr20:10057136|10057292 hsa-miR-6833-3p 0 1 0
chr20:10057136|10057292 hsa-miR-4676-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:10057136|10057292
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MSVTYGLNPFPLTSSLSFQPWRDLPQEPVREEKGRERMKQVTRPTPLEETD
Nucleotide Sequence CTGTCAGTCACGTATGGATTAAACCCCTTTCCTCTAACCTCCTCCCTCTCTTTCCAACCTTGGAGGGACCTTCCACAGGAGCCAGTTAGGGAGGAGAAGGGAAGAGAGAGAATGAAGCAGGTAACCAGGCCCACCCCTCTGGAGGAGACAGAC
CircID chr20:10057136|10057292
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MLHSLSSLLLPNWLLWKVPPRLEREGGG
Nucleotide Sequence CTGCTTCATTCTCTCTCTTCCCTTCTCCTCCCTAACTGGCTCCTGTGGAAGGTCCCTCCAAGGTTGGAAAGAGAGGGAGGAGGTTAG
CircID chr20:10057136|10057292
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MVTCFILSLPFSSLTGSCGRSLQGWKEREEVRGKGFNPYVTDRA
Nucleotide Sequence CTGGTTACCTGCTTCATTCTCTCTCTTCCCTTCTCCTCCCTAACTGGCTCCTGTGGAAGGTCCCTCCAAGGTTGGAAAGAGAGGGAGGAGGTTAGAGGAAAGGGGTTTAATCCATACGTGACTGACAGAGCT
CircID chr20:10057136|10057292
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MAPVEGPSKVGKRGRRLEERGLIHT
Nucleotide Sequence CTGGCTCCTGTGGAAGGTCCCTCCAAGGTTGGAAAGAGAGGGAGGAGGTTAGAGGAAAGGGGTTTAATCCATACGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab